Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 2.7e-68 261.9 137 100.0
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 2.0e-39 166.0 139 67.6
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 3.6e-28 128.6 142 54.9
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 5.7e-26 121.3 142 52.1
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.3e-22 110.2 145 46.9
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.9e-22 109.0 135 46.7
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 3.8e-22 108.6 147 46.3
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 3.8e-22 108.6 144 48.6
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 6.5e-22 107.8 144 46.5
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 1.2e-20 103.6 152 44.1
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 2.1e-20 102.8 142 46.5
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.7e-20 102.4 134 44.8
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 4.7e-20 101.7 123 48.0
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 8.0e-20 100.9 126 50.0
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 1.4e-19 100.1 144 43.8
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 1.4e-19 100.1 144 43.8
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 1.8e-19 99.8 129 48.1
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 2.3e-19 99.4 144 45.8
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 3.0e-19 99.0 134 47.0
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.0e-19 99.0 146 44.5
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 6.8e-19 97.8 147 45.6
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.2e-18 97.1 128 46.1
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.2e-18 97.1 134 44.8
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 1.5e-18 96.7 132 43.2
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.0e-18 96.3 139 46.0
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 4.4e-18 95.1 97 53.6
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 7.5e-18 94.4 139 45.3
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 9.7e-18 94.0 131 44.3
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.2e-17 92.8 95 53.7
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.8e-16 89.7 141 42.6
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.8e-16 89.7 134 44.8
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 1.8e-16 89.7 124 44.4
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.4e-16 89.4 130 44.6
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 3.1e-16 89.0 132 43.9
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 3.1e-16 89.0 141 41.8
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 3.1e-16 89.0 149 41.6
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 3.1e-16 89.0 141 44.0
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 4.1e-16 88.6 129 45.0
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 4.1e-16 88.6 134 40.3
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 4.1e-16 88.6 134 40.3
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.3e-16 88.2 133 41.4
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 5.3e-16 88.2 134 42.5
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 7.0e-16 87.8 134 42.5
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 9.1e-16 87.4 141 39.7
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.6e-15 86.7 104 51.0
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 2.0e-15 86.3 130 43.1
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 2.0e-15 86.3 137 42.3
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 2.0e-15 86.3 147 39.5
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.7e-15 85.9 133 40.6
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 2.7e-15 85.9 114 48.2
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 2.7e-15 85.9 132 41.7
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 5.9e-15 84.7 63 65.1
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 1.3e-14 83.6 130 41.5
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 1.3e-14 83.6 133 43.6
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 2.2e-14 82.8 63 61.9
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 2.9e-14 82.4 146 39.0
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 3.8e-14 82.0 133 42.9
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 6.5e-14 81.3 88 53.4
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 8.5e-14 80.9 98 49.0
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 1.1e-13 80.5 143 42.0
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.9e-13 79.7 135 40.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 2.5e-13 79.3 124 42.7
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 2.5e-13 79.3 91 49.5
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 4.2e-13 78.6 137 38.0
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 5.5e-13 78.2 101 45.5
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 5.5e-13 78.2 133 38.3
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 1.2e-12 77.0 143 38.5
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.6e-12 76.6 130 39.2
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 1.6e-12 76.6 145 40.0
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 2.7e-12 75.9 149 37.6
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 3.6e-12 75.5 132 37.1
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 6.1e-12 74.7 148 38.5
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 8.0e-12 74.3 143 37.8
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.4e-11 73.6 141 36.2
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.8e-11 73.2 130 36.9
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.8e-11 73.2 130 36.9
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.8e-11 73.2 93 45.2
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 2.3e-11 72.8 133 38.3
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 4.0e-11 72.0 85 49.4
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 5.2e-11 71.6 130 39.2
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 6.8e-11 71.2 130 37.7
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.2e-10 70.5 130 36.2
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 1.5e-10 70.1 92 44.6
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.0e-10 69.7 98 43.9
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 2.6e-10 69.3 147 36.7
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 2.6e-10 69.3 142 37.3
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.4e-10 68.6 98 44.9
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 7.5e-10 67.8 133 36.1
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 9.8e-10 67.4 141 34.8
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 2.2e-09 66.2 100 42.0
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 3.7e-09 65.5 128 37.5
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.1e-08 63.9 147 35.4
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 1.1e-08 63.9 140 35.7
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 1.8e-08 63.2 99 43.4
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 2.7e-07 59.3 137 36.5
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 4.5e-07 58.5 146 33.6
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 2.3e-06 56.2 106 39.6
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 2.3e-06 56.2 97 40.2
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 2.3e-06 56.2 97 40.2
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.3e-06 56.2 107 37.4
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 5.0e-06 55.1 135 34.8
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 6.6e-06 54.7 95 43.2


User provided reference genes

Program Settings