Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g112210 Amaranthus hybridus HOM05D001935 ORTHO05D010109 2.4e-87 325.5 167 100.0
AUR62024666 Chenopodium quinoa HOM05D001935 ORTHO05D010109 2.0e-41 172.9 153 62.7
EL10As5g23517 Beta vulgaris HOM05D001935 ORTHO05D010109 3.4e-41 172.2 165 57.0
Ah.11g049310 Amaranthus hybridus HOM05D001935 ORTHO05D010109 5.0e-40 168.3 166 57.8
AUR62011822 Chenopodium quinoa HOM05D001935 ORTHO05D010109 2.3e-37 159.5 152 60.5
EL10As5g23516 Beta vulgaris HOM05D001935 ORTHO05D010109 3.0e-37 159.1 160 55.0
COL.COLO4_23245 Corchorus olitorius HOM05D001935 ORTHO05D010109 4.7e-22 108.6 154 44.2
Cpa.g.sc18.27 Carica papaya HOM05D001935 ORTHO05D010109 8.8e-21 104.4 166 41.6
EL10Ac5g10513 Beta vulgaris HOM05D001935 ORTHO05D010109 1.3e-19 100.5 144 44.4
Haze_05029 Corylus avellana HOM05D001935 ORTHO05D010109 1.3e-19 100.5 145 42.8
Thecc.01G311900 Theobroma cacao HOM05D001935 ORTHO05D010109 1.3e-19 100.5 158 43.7
Gohir.D12G129300 Gossypium hirsutum HOM05D001935 ORTHO05D010109 6.3e-19 98.2 150 41.3
AUR62024667 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.1e-18 97.4 150 40.0
Gorai.008G140400 Gossypium raimondii HOM05D001935 ORTHO05D010109 1.1e-18 97.4 150 41.3
Cfa005813 Carpinus fangiana HOM05D001935 ORTHO05D010109 1.4e-18 97.1 149 43.0
Gohir.A07G128000 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.8e-18 96.7 145 38.6
Gohir.A12G125800 Gossypium hirsutum HOM05D001935 ORTHO05D010109 3.1e-18 95.9 150 38.0
Gohir.D07G132400 Gossypium hirsutum HOM05D001935 ORTHO05D010109 7.0e-18 94.7 145 37.9
Gorai.001G143800 Gossypium raimondii HOM05D001935 ORTHO05D010109 7.0e-18 94.7 145 37.9
TWI36G1013 Tripterygium wilfordii HOM05D001935 ORTHO05D010109 1.2e-17 94.0 166 37.3
QL12p020164 Quercus lobata HOM05D001935 ORTHO05D010109 1.0e-16 90.9 157 42.0
Ah.02g112200 Amaranthus hybridus HOM05D007400 ORTHO05D009351 1.7e-16 90.1 95 52.6
Duzib138G0891 Durio zibethinus HOM05D001935 ORTHO05D010109 5.0e-16 88.6 155 36.8
Sabra06G0082000 Salix brachista HOM05D001935 ORTHO05D010109 5.0e-16 88.6 151 39.1
Actinidia21004 Actinidia chinensis HOM05D001136 ORTHO05D001144 6.5e-16 88.2 153 34.6
CiPaw.07G116400 Carya illinoinensis HOM05D001935 ORTHO05D010109 6.5e-16 88.2 156 39.7
TAR633G2657 Trochodendron aralioides HOM05D001935 ORTHO05D010109 1.1e-15 87.4 151 35.8
Manes.01G226900 Manihot esculenta HOM05D001935 ORTHO05D010109 1.5e-15 87.0 149 34.2
Ca_09205_v3 Cicer arietinum L. HOM05D001935 ORTHO05D010109 1.9e-15 86.7 148 37.2
Potri.006G105500 Populus trichocarpa HOM05D001935 ORTHO05D010109 2.5e-15 86.3 168 38.7
SalBow3G1122 Salvia bowleyana HOM05D001935 ORTHO05D010109 2.5e-15 86.3 151 37.7
TAR362G0690 Trochodendron aralioides HOM05D001136 ORTHO05D010109 2.5e-15 86.3 153 36.6
Potri.006G105600 Populus trichocarpa HOM05D001935 ORTHO05D010109 3.2e-15 85.9 168 38.7
CiPaw.08G090700 Carya illinoinensis HOM05D001935 ORTHO05D010109 4.2e-15 85.5 152 38.2
Psat3g020520 Pisum sativum HOM05D001935 ORTHO05D010109 5.5e-15 85.1 148 37.2
MELO3C015930.2 Cucumis melo HOM05D001935 ORTHO05D010109 7.2e-15 84.7 166 37.3
Lj1g0023097 Lotus japonicus HOM05D001935 ORTHO05D010109 1.2e-14 84.0 154 33.1
Glyma.03G218900 Glycine max HOM05D001935 ORTHO05D010109 1.6e-14 83.6 158 34.2
CSS0010042 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 2.7e-14 82.8 172 34.9
CSS0012652 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 2.7e-14 82.8 172 34.9
Hma1.2p1_0486F.1_g163095 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 3.6e-14 82.4 148 38.5
Hma1.2p1_0486F.1_g163120 Hydrangea macrophylla HOM05D001935 ORTHO05D010109 3.6e-14 82.4 148 38.5
Atru.chr5.1024 Acer truncatum HOM05D001935 ORTHO05D010109 4.7e-14 82.0 162 35.8
CSS0036092 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D010109 6.1e-14 81.6 162 35.8
Potri.016G128800 Populus trichocarpa HOM05D001935 ORTHO05D010109 6.1e-14 81.6 151 36.4
TPR.G4060 Trifolium pratense HOM05D001935 ORTHO05D010109 6.1e-14 81.6 161 34.8
MBI18_g28444_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 8.0e-14 81.3 119 39.5
Sabra16G0129700 Salix brachista HOM05D001935 ORTHO05D010109 8.0e-14 81.3 155 36.8
AUR62011823 Chenopodium quinoa HOM05D001935 ORTHO05D010109 1.4e-13 80.5 128 40.6
GSVIVG01028106001 Vitis vinifera HOM05D001935 ORTHO05D010109 1.4e-13 80.5 76 47.4
Atru.chr5.1021 Acer truncatum HOM05D001935 ORTHO05D010109 6.7e-13 78.2 162 33.3
ClCG09G005160 Citrullus lanatus HOM05D001935 ORTHO05D010109 8.8e-13 77.8 170 37.6
VMungo1383G2590 Vigna mungo HOM05D001935 ORTHO05D010109 8.8e-13 77.8 156 32.7
Sed0028026 Sechium edule HOM05D001935 ORTHO05D010109 1.2e-12 77.4 165 37.0
Medtr7g109420 Medicago truncatula HOM05D001935 ORTHO05D010109 2.0e-12 76.6 157 33.8
Oeu038015.2 Olea europaea HOM05D001935 ORTHO05D010109 2.6e-12 76.3 149 37.6
Phvul.001G212300 Phaseolus vulgaris HOM05D001935 ORTHO05D010109 2.6e-12 76.3 154 33.1
Aqoxy2G01830 Aquilegia oxysepala HOM05D001935 ORTHO05D010109 4.4e-12 75.5 153 34.0
Dinv10085 Davidia involucrata HOM05D001935 ORTHO05D010109 4.4e-12 75.5 135 34.1
Rhsim13G0005200 Rhododendron simsii HOM05D001935 ORTHO05D010109 4.4e-12 75.5 167 30.5
Gohir.D11G115100 Gossypium hirsutum HOM05D001935 ORTHO05D010109 5.7e-12 75.1 164 33.5
Gorai.007G123300 Gossypium raimondii HOM05D001935 ORTHO05D010109 5.7e-12 75.1 164 34.1
Dinv10084 Davidia involucrata HOM05D001935 ORTHO05D010109 7.5e-12 74.7 96 42.7
Sed0011579 Sechium edule HOM05D001935 ORTHO05D010109 1.3e-11 73.9 165 35.2
CsaV3_7G029910 Cucumis sativus L. HOM05D001935 ORTHO05D010109 1.7e-11 73.6 89 47.2
Gohir.A11G109500 Gossypium hirsutum HOM05D001935 ORTHO05D010109 1.7e-11 73.6 97 43.3
Glyma.19G215700 Glycine max HOM05D001935 ORTHO05D010109 2.2e-11 73.2 155 32.9
MBI19_g24818_MAGBIO Magnolia biondii HOM05D006641 ORTHO05D007573 4.8e-11 72.0 122 36.1
PGR044G2318 Punica granatum HOM05D001935 ORTHO05D010109 6.3e-11 71.6 157 32.5
Ciclev10022487m.g Citrus clementina HOM05D001935 ORTHO05D010109 8.2e-11 71.2 118 39.8
Eucgr.H01053 Eucalyptus grandis HOM05D001935 ORTHO05D010109 2.4e-10 69.7 154 34.4
Rhsim13G0005300 Rhododendron simsii HOM05D001935 ORTHO05D010109 2.4e-10 69.7 165 31.5
SGA_v2.0_scaffold376G50276 Striga asiatica HOM05D001935 ORTHO05D010109 5.3e-10 68.6 146 34.9
unitig_0.g277 Utricularia gibba HOM05D001935 ORTHO05D010109 5.3e-10 68.6 164 31.7
AUR62023214 Chenopodium quinoa HOM05D001935 ORTHO05D001700 7.7e-09 64.7 151 31.8
AUR62023260 Chenopodium quinoa HOM05D001935 ORTHO05D001700 7.7e-09 64.7 159 32.1
Cc04_g06130 Coffea canephora HOM05D007478 ORTHO05D001700 7.7e-09 64.7 153 33.3
Prupe.3G150600 Prunus persica HOM05D001935 ORTHO05D001700 1.3e-08 63.9 130 34.6
Sed0021808 Sechium edule HOM05D001935 ORTHO05D001700 8.5e-08 61.2 153 28.1
ECA247G2557 Erigeron canadensis HOM05D006641 ORTHO05D007573 1.1e-07 60.8 136 30.9
ATR0706G209 Amborella trichopoda HOM05D001935 ORTHO05D010109 1.5e-07 60.5 155 29.0
Lalb_Chr06g0165671 Lupinus albus HOM05D001935 ORTHO05D001700 1.5e-07 60.5 170 31.2
Eucgr.B00987 Eucalyptus grandis HOM05D007478 ORTHO05D001700 2.5e-07 59.7 154 31.2
QL10p030590 Quercus lobata HOM05D007478 ORTHO05D001700 2.5e-07 59.7 151 28.5
ATR0326G051 Amborella trichopoda HOM05D001935 ORTHO05D001700 3.2e-07 59.3 158 29.7
MELO3C017371.2 Cucumis melo HOM05D007478 ORTHO05D001700 3.2e-07 59.3 156 28.2
Eucgr.B00885 Eucalyptus grandis HOM05D007478 ORTHO05D001700 3.2e-07 59.3 154 31.2
Gohir.D05G318900 Gossypium hirsutum HOM05D001935 ORTHO05D001700 4.2e-07 58.9 153 32.0
Gorai.009G341800 Gossypium raimondii HOM05D001935 ORTHO05D001700 4.2e-07 58.9 153 32.0
MBI10_g37756_MAGBIO Magnolia biondii HOM05D001935 ORTHO05D001700 4.2e-07 58.9 173 26.0
CiPaw.15G144400 Carya illinoinensis HOM05D007478 ORTHO05D001700 7.2e-07 58.2 154 29.2
DCAR_005768 Daucus carota HOM05D001935 ORTHO05D010109 7.2e-07 58.2 123 30.9
Ciclev10012926m.g Citrus clementina HOM05D001935 ORTHO05D001700 9.4e-07 57.8 114 35.1
TPR.G25253 Trifolium pratense HOM05D001935 ORTHO05D001700 9.4e-07 57.8 146 28.8
Potri.015G036800 Populus trichocarpa HOM05D007478 ORTHO05D001700 1.2e-06 57.4 152 28.9
ClCG06G014210 Citrullus lanatus HOM05D007478 ORTHO05D001700 1.6e-06 57.0 159 25.8
Dinv12075 Davidia involucrata HOM05D001935 ORTHO05D010109 1.6e-06 57.0 60 46.7
Rhsim03G0153200 Rhododendron simsii HOM05D003369 ORTHO05D004089 1.6e-06 57.0 110 31.8
Atru.chr1.1571 Acer truncatum HOM05D001935 ORTHO05D001700 2.1e-06 56.6 119 31.1
CSS0041319 Camellia sinensis var. sinensis HOM05D001935 ORTHO05D001700 2.1e-06 56.6 164 28.0
Ca_11107_v3 Cicer arietinum L. HOM05D001935 ORTHO05D001700 2.1e-06 56.6 153 30.7
COL.COLO4_03618 Corchorus olitorius HOM05D001935 ORTHO05D001700 2.1e-06 56.6 142 27.5
Manes.02G072700 Manihot esculenta HOM05D001935 ORTHO05D001700 2.1e-06 56.6 151 29.1
Oeu030802.1 Olea europaea HOM05D001935 ORTHO05D001700 2.1e-06 56.6 163 28.2
VMungo0251G2682 Vigna mungo HOM05D007478 ORTHO05D001700 2.1e-06 56.6 155 30.3
Gohir.A05G317100 Gossypium hirsutum HOM05D001935 ORTHO05D001700 2.7e-06 56.2 153 31.4
Aqoxy2G01829 Aquilegia oxysepala HOM05D006641 ORTHO05D007573 3.6e-06 55.8 167 26.9
Psat4g000040 Pisum sativum HOM05D007478 ORTHO05D001700 3.6e-06 55.8 154 30.5
Psat6g223000 Pisum sativum HOM05D001935 ORTHO05D001700 3.6e-06 55.8 148 29.7
Nitab4.5_0001648g0030 Nicotiana tabacum HOM05D001935 ORTHO05D001700 4.7e-06 55.5 172 32.0
Sabra04G0063200 Salix brachista HOM05D001935 ORTHO05D001700 4.7e-06 55.5 111 33.3
Sed0024095 Sechium edule HOM05D007478 ORTHO05D001700 4.7e-06 55.5 158 28.5
Gohir.A07G075100 Gossypium hirsutum HOM05D001935 ORTHO05D001700 6.1e-06 55.1 177 26.6
Gohir.D07G079675 Gossypium hirsutum HOM05D001935 ORTHO05D001700 6.1e-06 55.1 175 28.0
Gorai.001G084400 Gossypium raimondii HOM05D001935 ORTHO05D001700 6.1e-06 55.1 175 27.4
HanXRQChr07g0189891 Helianthus annuus HOM05D001935 ORTHO05D001700 6.1e-06 55.1 162 27.2
Phvul.002G330900 Phaseolus vulgaris HOM05D007478 ORTHO05D001700 6.1e-06 55.1 155 29.7
Sabra10G0087500 Salix brachista HOM05D001935 ORTHO05D001700 6.1e-06 55.1 143 28.0
Sed0010378 Sechium edule HOM05D001935 ORTHO05D001700 6.1e-06 55.1 126 32.5
TAR622G0514 Trochodendron aralioides HOM05D001935 ORTHO05D001700 6.1e-06 55.1 120 31.7
TAR629G0885 Trochodendron aralioides HOM05D007478 ORTHO05D001700 6.1e-06 55.1 146 27.4
Dinv16185 Davidia involucrata HOM05D001935 ORTHO05D001700 8.0e-06 54.7 106 32.1
Lalb_Chr10g0096321 Lupinus albus HOM05D001935 ORTHO05D001700 8.0e-06 54.7 145 26.9
Potri.012G045600 Populus trichocarpa HOM05D007478 ORTHO05D001700 8.0e-06 54.7 155 29.7
Potri.017G121200 Populus trichocarpa HOM05D001935 ORTHO05D001700 8.0e-06 54.7 107 34.6


User provided reference genes

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