Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.02g112190 Amaranthus hybridus HOM05D007400 ORTHO05D009351 3.8e-38 161.0 80 100.0
EL10As5g23512 Beta vulgaris HOM05D007400 ORTHO05D009351 2.3e-35 151.8 78 93.6
CSS0009058 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 5.1e-35 150.6 78 91.0
AUR62024671 Chenopodium quinoa HOM05D007400 ORTHO05D009351 5.1e-35 150.6 78 92.3
Actinidia11209 Actinidia chinensis HOM05D007400 ORTHO05D009351 8.7e-35 149.8 78 89.7
GSVIVG01012101001 Vitis vinifera HOM05D007400 ORTHO05D009351 8.7e-35 149.8 78 91.0
Hma1.2p1_0040F.1_g025040 Hydrangea macrophylla HOM05D007400 ORTHO05D009351 1.1e-34 149.4 78 89.7
ATR0763G247 Amborella trichopoda HOM05D007400 ORTHO05D009351 1.5e-34 149.1 78 87.2
CANSAT11G1633 Cannabis sativa HOM05D007400 ORTHO05D009351 1.5e-34 149.1 78 88.5
Cfa000725 Carpinus fangiana HOM05D007400 ORTHO05D009351 1.5e-34 149.1 78 89.7
CDE05G1756 Ceratophyllum demersum HOM05D007400 ORTHO05D009351 1.5e-34 149.1 78 87.2
Ciclev10016614m.g Citrus clementina HOM05D007400 ORTHO05D009351 1.9e-34 148.7 78 88.5
QL11p018093 Quercus lobata HOM05D007400 ORTHO05D009351 1.9e-34 148.7 78 89.7
Cpa.g.sc135.34 Carica papaya HOM05D007400 ORTHO05D009351 2.5e-34 148.3 78 89.7
PSO675G6700 Papaver somniferum HOM05D007400 ORTHO05D009351 3.3e-34 147.9 78 91.0
CAN.G1222.5 Capsicum annuum HOM05D007400 ORTHO05D009351 4.3e-34 147.5 80 86.2
CiPaw.10G065400 Carya illinoinensis HOM05D007400 ORTHO05D009351 4.3e-34 147.5 78 87.2
Eucgr.E01894 Eucalyptus grandis HOM05D007400 ORTHO05D009351 4.3e-34 147.5 78 87.2
Potri.012G119800 Populus trichocarpa HOM05D007400 ORTHO05D009351 4.3e-34 147.5 78 88.5
Sp7g18330 Schrenkiella parvula HOM05D007400 ORTHO05D009351 4.3e-34 147.5 79 87.3
CSS0000937 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 5.7e-34 147.1 78 88.5
ClCG01G009370 Citrullus lanatus HOM05D007400 ORTHO05D009351 5.7e-34 147.1 79 84.8
Duzib192G0901 Durio zibethinus HOM05D007400 ORTHO05D009351 5.7e-34 147.1 78 87.2
Glyma.10G066600 Glycine max HOM05D007400 ORTHO05D009351 5.7e-34 147.1 80 87.5
Peaxi162Scf00149g01015 Petunia axillaris HOM05D007400 ORTHO05D009351 5.7e-34 147.1 78 87.2
Thecc.06G140800 Theobroma cacao HOM05D007400 ORTHO05D009351 5.7e-34 147.1 78 87.2
AUR62011827 Chenopodium quinoa HOM05D007400 ORTHO05D009351 9.7e-34 146.4 76 92.1
Cc09_g06320 Coffea canephora HOM05D007400 ORTHO05D009351 9.7e-34 146.4 78 85.9
HanXRQChr15g0487331 Helianthus annuus HOM05D007400 ORTHO05D009351 9.7e-34 146.4 80 87.5
Solyc02g069130.3 Solanum lycopersicum HOM05D007400 ORTHO05D009351 9.7e-34 146.4 80 85.0
Sopen02g018260 Solanum pennellii HOM05D007400 ORTHO05D009351 9.7e-34 146.4 80 85.0
MELO3C021776.2 Cucumis melo HOM05D007400 ORTHO05D009351 1.3e-33 146.0 79 83.5
CsaV3_1G046550 Cucumis sativus L. HOM05D007400 ORTHO05D009351 1.3e-33 146.0 79 83.5
Gohir.A05G144700 Gossypium hirsutum HOM05D007400 ORTHO05D009351 1.3e-33 146.0 78 85.9
TAR626G1335 Trochodendron aralioides HOM05D007400 ORTHO05D009351 1.3e-33 146.0 78 87.2
Aa31LG6G2310 Aethionema arabicum HOM05D007400 ORTHO05D009351 1.6e-33 145.6 80 85.0
Thhalv10026156m.g Eutrema salsugineum HOM05D007400 ORTHO05D009351 1.6e-33 145.6 79 87.3
Oeu050064.1 Olea europaea HOM05D007400 ORTHO05D009351 1.6e-33 145.6 78 87.2
unitig_61.g26077 Utricularia gibba HOM05D007400 ORTHO05D009351 1.6e-33 145.6 78 84.6
AT4G19830 Arabidopsis thaliana HOM05D007400 ORTHO05D009351 2.2e-33 145.2 79 86.1
FvH4_4g09390 Fragaria vesca HOM05D007400 ORTHO05D009351 2.2e-33 145.2 80 81.2
Gorai.009G151100 Gossypium raimondii HOM05D007400 ORTHO05D009351 2.2e-33 145.2 78 84.6
Sed0027636 Sechium edule HOM05D007400 ORTHO05D009351 2.2e-33 145.2 79 84.8
Manes.16G059200 Manihot esculenta HOM05D007400 ORTHO05D009351 3.7e-33 144.4 77 88.3
RcHm_v2.0_Chr4g0402661 Rosa chinensis HOM05D007400 ORTHO05D009351 3.7e-33 144.4 78 82.1
Carub.0007s2138 Capsella rubella HOM05D007400 ORTHO05D009351 4.8e-33 144.1 77 88.3
Haze_06019 Corylus avellana HOM05D007400 ORTHO05D009351 4.8e-33 144.1 78 85.9
Gohir.D05G147100 Gossypium hirsutum HOM05D007400 ORTHO05D009351 4.8e-33 144.1 78 83.3
Lsat_1_v5_gn_8_117760 Lactuca sativa HOM05D007400 ORTHO05D009351 4.8e-33 144.1 80 86.2
arahy.Tifrunner.gnm1.ann1.ARB9WH Arachis hypogaea HOM05D007400 ORTHO05D009351 6.3e-33 143.7 78 87.2
BcaB03g11643 Brassica carinata HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
BcaC01g00636 Brassica carinata HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
A08p14510 Brassica napus HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
C03p82350 Brassica napus HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
BolC3t20518H Brassica oleracea HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
BraA08t33439Z Brassica rapa HOM05D007400 ORTHO05D009351 6.3e-33 143.7 77 87.0
DCAR_003791 Daucus carota HOM05D007400 ORTHO05D009351 6.3e-33 143.7 78 85.9
Lj5g0000759 Lotus japonicus HOM05D007400 ORTHO05D009351 6.3e-33 143.7 78 85.9
Phvul.007G223000 Phaseolus vulgaris HOM05D007400 ORTHO05D009351 6.3e-33 143.7 80 85.0
Sc05g0000500 Simmondsia chinensis HOM05D007400 ORTHO05D009351 6.3e-33 143.7 78 85.9
CARHR226600 Cardamine hirsuta HOM05D007400 ORTHO05D009351 8.2e-33 143.3 79 84.8
Medtr1g061080 Medicago truncatula HOM05D007400 ORTHO05D009351 8.2e-33 143.3 78 84.6
THA.LOC104811504 Tarenaya hassleriana HOM05D007400 ORTHO05D009351 8.2e-33 143.3 78 85.9
TWI63G0941 Tripterygium wilfordii HOM05D007400 ORTHO05D009351 8.2e-33 143.3 78 84.6
Atru.chr10.612 Acer truncatum HOM05D007400 ORTHO05D009351 1.1e-32 142.9 78 83.3
arahy.Tifrunner.gnm1.ann1.L1RKW0 Arachis hypogaea HOM05D007400 ORTHO05D009351 1.1e-32 142.9 78 85.9
Lj2A352T41 Lonicera japonica HOM05D007400 ORTHO05D009351 1.1e-32 142.9 78 85.9
MD00G1111500 Malus domestica HOM05D007400 ORTHO05D009351 1.1e-32 142.9 78 82.1
Nn7g38084 Nelumbo nucifera HOM05D007400 ORTHO05D009351 1.1e-32 142.9 73 93.2
Os02g0168700 Oryza sativa ssp. japonica HOM05D007400 ORTHO05D009351 1.1e-32 142.9 77 84.4
ECA232G4176 Erigeron canadensis HOM05D007400 ORTHO05D009351 1.8e-32 142.1 78 85.9
PGR042G1002 Punica granatum HOM05D007400 ORTHO05D009351 2.4e-32 141.7 83 81.9
FAN22G1838 Fragaria x ananassa HOM05D007400 ORTHO05D009351 3.1e-32 141.4 78 80.8
TPR.G5680 Trifolium pratense HOM05D007400 ORTHO05D009351 3.1e-32 141.4 74 91.9
Zm00001eb207360 Zea mays HOM05D007400 ORTHO05D009351 3.1e-32 141.4 77 83.1
Lalb_Chr09g0328751 Lupinus albus HOM05D007400 ORTHO05D009351 4.1e-32 141.0 78 83.3
Migut.L00012 Erythranthe guttata HOM05D007400 ORTHO05D009351 5.3e-32 140.6 77 83.1
Nitab4.5_0017218g0010 Nicotiana tabacum HOM05D007400 ORTHO05D009351 9.0e-32 139.8 73 89.0
SGA_v2.0_scaffold341G49377 Striga asiatica HOM05D007400 ORTHO05D009351 1.5e-31 139.0 77 85.7
vmacro11006 Vaccinium macrocarpon HOM05D007400 ORTHO05D009351 2.0e-31 138.7 84 81.0
Migut.C00263 Erythranthe guttata HOM05D007400 ORTHO05D009351 5.9e-31 137.1 77 81.8
Mapoly0025s0105 Marchantia polymorpha HOM05D007400 ORTHO05D009351 5.9e-31 137.1 77 77.9
Cc11_g00930 Coffea canephora HOM05D007400 ORTHO05D009351 1.7e-30 135.6 78 78.2
SMO270G0023 Selaginella moellendorffii HOM05D007400 ORTHO05D009351 2.9e-30 134.8 76 80.3
AagrBONN_evm.TU.Sc2ySwM_344.2066 Anthoceros agrestis HOM05D003486 ORTHO05D004600 6.5e-30 133.7 77 75.3
VMungo0720G1846 Vigna mungo HOM05D007400 ORTHO05D009351 6.5e-30 133.7 89 74.2
Pp3c2_2300 Physcomitrium patens HOM05D007400 ORTHO05D009351 3.2e-29 131.3 77 77.9
MBI09_g37060_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 3.6e-28 127.9 123 56.9
Ca_11627_v3 Cicer arietinum L. HOM05D007400 ORTHO05D009351 1.0e-27 126.3 78 79.5
MBI09_g28984_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 3.3e-26 121.3 143 49.7
PSO675G3258 Papaver somniferum HOM05D007400 ORTHO05D009351 6.5e-22 107.1 56 91.1
CSS0044125 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 2.3e-19 98.6 50 92.0
Rhsim02G0169200 Rhododendron simsii HOM05D007400 ORTHO05D009351 1.1e-18 96.3 166 38.0
AL7G34270 Arabidopsis lyrata HOM05D000741 ORTHO05D000506 1.4e-16 89.4 110 50.0
Sabra12G0089100 Salix brachista HOM05D007400 ORTHO05D009351 1.9e-13 79.0 58 67.2
CSS0019726 Camellia sinensis var. sinensis HOM05D007400 ORTHO05D009351 9.4e-13 76.6 39 89.7
Dinv04112 Davidia involucrata HOM05D007400 ORTHO05D009351 1.6e-12 75.9 39 89.7
MBI08_g39084_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 2.1e-12 75.5 39 87.2
COL.COLO4_30978 Corchorus olitorius HOM05D000065 ORTHO05D001606 3.6e-12 74.7 39 87.2
AL7G34250 Arabidopsis lyrata HOM05D007400 ORTHO05D009351 6.1e-12 73.9 39 87.2
Prupe.1G087100 Prunus persica HOM05D007400 ORTHO05D009351 6.1e-12 73.9 39 82.1
FAN12G2033 Fragaria x ananassa HOM05D007400 ORTHO05D009351 6.7e-11 70.5 39 74.4
Psat6g078400 Pisum sativum HOM05D007400 ORTHO05D009351 1.1e-10 69.7 39 79.5
MBI03_g31611_MAGBIO Magnolia biondii HOM05D007400 ORTHO05D009351 2.0e-10 68.9 34 94.1
Pp3c5_13790 Physcomitrium patens HOM05D002468 ORTHO05D009172 1.2e-07 59.7 78 44.9
Mapoly0061s0100 Marchantia polymorpha HOM05D002468 ORTHO05D009172 3.5e-07 58.2 79 44.3
CBR_g38077 Chara braunii HOM05D002468 ORTHO05D009172 2.2e-06 55.5 80 43.8
Pp3c16_12110 Physcomitrium patens HOM05D002468 ORTHO05D009172 2.2e-06 55.5 78 42.3
SMO356G0109 Selaginella moellendorffii HOM05D007127 ORTHO05D008803 3.8e-06 54.7 76 42.1
Hma1.2p1_0193F.1_g083963 Hydrangea macrophylla HOM05D007127 ORTHO05D008803 5.0e-06 54.3 76 38.2
FAN25G0358 Fragaria x ananassa HOM05D007127 ORTHO05D008803 6.5e-06 53.9 76 35.5
Potri.001G467100 Populus trichocarpa HOM05D007127 ORTHO05D008803 8.5e-06 53.5 76 38.2


User provided reference genes

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