Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g023940 Amaranthus hybridus HOM05D001765 ORTHO05D003527 1.1e-40 169.5 80 100.0
EL10Ac9g22070 Beta vulgaris HOM05D001765 ORTHO05D003527 7.2e-29 130.2 78 75.6
AUR62012884 Chenopodium quinoa HOM05D001765 ORTHO05D003527 4.2e-21 104.4 78 65.4
AUR62027108 Chenopodium quinoa HOM05D001765 ORTHO05D003527 4.4e-18 94.4 78 61.5
Hund00380 Selenicereus undatus HOM05D001765 ORTHO05D003527 4.8e-17 90.9 78 59.0
Sed0027749 Sechium edule HOM05D001765 ORTHO05D003527 1.5e-10 69.3 78 39.7
CsaV3_5G001370 Cucumis sativus L. HOM05D001765 ORTHO05D003527 2.6e-10 68.6 62 48.4
ClCG01G001250 Citrullus lanatus HOM05D001765 ORTHO05D003527 4.4e-10 67.8 77 40.3
MELO3C005810.2 Cucumis melo HOM05D001765 ORTHO05D003527 4.4e-10 67.8 62 48.4
CANSAT21G2548 Cannabis sativa HOM05D001765 ORTHO05D003527 7.5e-10 67.0 74 43.2
QL93p2012_0001 Quercus lobata HOM05D001765 ORTHO05D003527 7.5e-10 67.0 57 56.1
unitig_52.g17201 Utricularia gibba HOM05D000742 ORTHO05D000924 7.5e-10 67.0 74 44.6
CiPaw.11G106600 Carya illinoinensis HOM05D001765 ORTHO05D003527 9.7e-10 66.6 74 44.6
QL93p2012_0027 Quercus lobata HOM05D001765 ORTHO05D003527 1.7e-09 65.9 56 57.1
Cc08_g05160 Coffea canephora HOM05D001765 ORTHO05D003527 2.2e-09 65.5 61 44.3
Gorai.008G262200 Gossypium raimondii HOM05D001765 ORTHO05D003527 2.2e-09 65.5 69 50.7
Gohir.A12G243600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.8e-09 65.1 69 49.3
Gohir.D12G244600 Gossypium hirsutum HOM05D001765 ORTHO05D003527 2.8e-09 65.1 69 49.3
PSO063G6238 Papaver somniferum HOM05D001765 ORTHO05D003527 2.8e-09 65.1 62 46.8
SalBow1G2231 Salvia bowleyana HOM05D001765 ORTHO05D003527 2.8e-09 65.1 64 48.4
ATR0579G141 Amborella trichopoda HOM05D001765 ORTHO05D003527 4.8e-09 64.3 51 52.9
SGA_v2.0_scaffold20G09260 Striga asiatica HOM05D001765 ORTHO05D003527 4.8e-09 64.3 74 40.5
Eucgr.D02536 Eucalyptus grandis HOM05D001765 ORTHO05D003527 8.2e-09 63.5 71 43.7
Dinv12396 Davidia involucrata HOM05D001765 ORTHO05D003527 1.1e-08 63.2 61 45.9
Migut.E00773 Erythranthe guttata HOM05D001765 ORTHO05D003527 1.1e-08 63.2 78 39.7
Hma1.2p1_0436F.1_g152890 Hydrangea macrophylla HOM05D001765 ORTHO05D003527 1.8e-08 62.4 64 46.9
Oeu063650.1 Olea europaea HOM05D007843 ORTHO05D003639 1.8e-08 62.4 70 42.9
Prupe.5G136900 Prunus persica HOM05D001765 ORTHO05D003527 2.4e-08 62.0 52 50.0
COL.COLO4_10860 Corchorus olitorius HOM05D001765 ORTHO05D003527 4.1e-08 61.2 67 43.3
Duzib068G1454 Durio zibethinus HOM05D001765 ORTHO05D003527 4.1e-08 61.2 69 44.9
Thhalv10019277m.g Eutrema salsugineum HOM05D001765 ORTHO05D003527 4.1e-08 61.2 52 50.0
PGR031G0625 Punica granatum HOM05D001765 ORTHO05D003527 4.1e-08 61.2 74 40.5
Haze_03592 Corylus avellana HOM05D001765 ORTHO05D003527 5.3e-08 60.8 50 54.0
FvH4_5g10193 Fragaria vesca HOM05D001765 ORTHO05D003527 5.3e-08 60.8 80 40.0
FAN04G1154 Fragaria x ananassa HOM05D000258 ORTHO05D000153 5.3e-08 60.8 80 38.8
Nn1g00491 Nelumbo nucifera HOM05D001765 ORTHO05D003527 5.3e-08 60.8 59 44.1
vmacro11471 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 5.3e-08 60.8 63 42.9
Actinidia22239 Actinidia chinensis HOM05D001765 ORTHO05D003527 7.0e-08 60.5 51 51.0
RcHm_v2.0_Chr7g0188041 Rosa chinensis HOM05D001765 ORTHO05D003527 7.0e-08 60.5 57 45.6
THA.LOC104823621 Tarenaya hassleriana HOM05D001765 ORTHO05D003527 9.1e-08 60.1 59 47.5
Aqoxy5G04386 Aquilegia oxysepala HOM05D001765 ORTHO05D003527 1.2e-07 59.7 59 44.1
Sabra16G0306500 Salix brachista HOM05D001765 ORTHO05D003527 1.2e-07 59.7 79 40.5
TAR375G0793 Trochodendron aralioides HOM05D001765 ORTHO05D003527 1.2e-07 59.7 58 43.1
MD06G1126400 Malus domestica HOM05D001765 ORTHO05D003527 1.6e-07 59.3 52 48.1
PSO782G3477 Papaver somniferum HOM05D001765 ORTHO05D003527 1.6e-07 59.3 51 47.1
Thecc.03G214000 Theobroma cacao HOM05D001765 ORTHO05D003527 1.6e-07 59.3 67 41.8
Cpa.g.sc37.116 Carica papaya HOM05D001765 ORTHO05D003527 2.0e-07 58.9 74 40.5
MSTRG.2000 Avicennia marina HOM05D001765 ORTHO05D003527 2.7e-07 58.5 74 41.9
CSS0000240 Camellia sinensis var. sinensis HOM05D001765 ORTHO05D003527 2.7e-07 58.5 64 42.2
FAN13G1501 Fragaria x ananassa HOM05D000258 ORTHO05D000153 2.7e-07 58.5 80 37.5
Peaxi162Scf00779g00211 Petunia axillaris HOM05D001765 ORTHO05D003527 3.5e-07 58.2 58 48.3
TWI60G1724 Tripterygium wilfordii HOM05D001765 ORTHO05D003527 4.5e-07 57.8 63 47.6
Aa31LG4G4230 Aethionema arabicum HOM05D001765 ORTHO05D003527 5.9e-07 57.4 53 45.3
Nitab4.5_0000450g0050 Nicotiana tabacum HOM05D001765 ORTHO05D003527 5.9e-07 57.4 55 47.3
Sed0026089 Sechium edule HOM05D001765 ORTHO05D003527 7.7e-07 57.0 79 39.2
Carub.0002s2071 Capsella rubella HOM05D001765 ORTHO05D003527 1.3e-06 56.2 51 47.1
CARHR067050 Cardamine hirsuta HOM05D001765 ORTHO05D003527 1.3e-06 56.2 51 47.1
Manes.01G000550 Manihot esculenta HOM05D001765 ORTHO05D003527 1.3e-06 56.2 58 41.4
GSVIVG01019710001 Vitis vinifera HOM05D001765 ORTHO05D003527 1.3e-06 56.2 48 52.1
DCAR_019220 Daucus carota HOM05D001765 ORTHO05D003527 1.7e-06 55.8 58 43.1
MBI04_g26129_MAGBIO Magnolia biondii HOM05D004143 ORTHO05D004816 1.7e-06 55.8 58 41.4
Nitab4.5_0006317g0030 Nicotiana tabacum HOM05D001765 ORTHO05D003527 1.7e-06 55.8 74 41.9
AL2G33770 Arabidopsis lyrata HOM05D001765 ORTHO05D003527 2.9e-06 55.1 51 47.1
AT1G73940 Arabidopsis thaliana HOM05D001765 ORTHO05D003527 2.9e-06 55.1 51 47.1
Potri.001G453400 Populus trichocarpa HOM05D001765 ORTHO05D003527 2.9e-06 55.1 51 43.1
Sp5g29140 Schrenkiella parvula HOM05D001765 ORTHO05D003527 2.9e-06 55.1 51 47.1
Duzib084G1229 Durio zibethinus HOM05D001765 ORTHO05D003527 6.5e-06 53.9 67 38.8
vmacro08521 Vaccinium macrocarpon HOM05D001765 ORTHO05D003527 6.5e-06 53.9 60 38.3
C06p48050 Brassica napus HOM05D001765 ORTHO05D003527 8.5e-06 53.5 51 45.1
BolC6t39840H Brassica oleracea HOM05D001765 ORTHO05D003527 8.5e-06 53.5 51 45.1
BraA07t30598Z Brassica rapa HOM05D001765 ORTHO05D003527 8.5e-06 53.5 51 45.1
BraA07t31525Z Brassica rapa HOM05D001765 ORTHO05D003527 8.5e-06 53.5 51 45.1


User provided reference genes

Program Settings