Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 2.5e-90 335.5 178 100.0
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 3.8e-38 162.2 180 55.0
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 2.0e-31 139.8 141 55.3
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 2.5e-29 132.9 134 55.2
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 1.8e-27 126.7 182 50.0
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 1.8e-27 126.7 160 50.0
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.3e-27 126.3 177 50.8
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 3.0e-27 125.9 177 50.3
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 5.1e-27 125.2 179 43.6
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 1.1e-26 124.0 181 51.4
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 3.3e-26 122.5 180 50.0
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 4.3e-26 122.1 177 45.2
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 5.7e-26 121.7 187 46.5
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.3e-25 120.6 189 43.4
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 1.7e-25 120.2 176 46.0
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 2.2e-25 119.8 174 47.1
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 2.2e-25 119.8 151 51.0
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 3.7e-25 119.0 163 49.7
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 4.8e-25 118.6 156 49.4
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.1e-24 117.5 177 42.9
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 1.1e-24 117.5 180 44.4
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 1.1e-24 117.5 183 43.7
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 2.4e-24 116.3 185 44.3
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 4.1e-24 115.5 149 50.3
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 5.3e-24 115.2 185 48.1
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 2.6e-23 112.8 176 44.3
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 5.9e-23 111.7 181 44.8
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 7.7e-23 111.3 177 41.8
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 1.3e-22 110.5 176 42.0
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 1.7e-22 110.2 185 47.6
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 1.7e-22 110.2 179 41.3
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 2.2e-22 109.8 152 50.0
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 3.8e-22 109.0 183 44.3
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 3.8e-22 109.0 180 43.9
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 5.0e-22 108.6 199 44.7
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 5.0e-22 108.6 179 40.8
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 8.5e-22 107.8 176 44.3
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 1.1e-21 107.5 186 46.2
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 1.1e-21 107.5 186 47.8
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 1.1e-21 107.5 186 47.8
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 1.1e-21 107.5 185 44.9
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 1.4e-21 107.1 182 41.8
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 1.4e-21 107.1 169 45.6
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.4e-21 107.1 182 44.5
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 1.4e-21 107.1 182 41.8
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 1.9e-21 106.7 152 51.3
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.9e-21 106.7 148 49.3
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 2.5e-21 106.3 186 45.2
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 2.5e-21 106.3 186 45.2
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 3.2e-21 105.9 155 46.5
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 4.2e-21 105.5 186 45.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 4.2e-21 105.5 154 48.1
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 9.4e-21 104.4 181 42.0
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.2e-20 104.0 174 44.3
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-20 103.6 133 47.4
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 1.6e-20 103.6 171 40.9
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 2.7e-20 102.8 155 47.1
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 2.7e-20 102.8 159 46.5
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 6.1e-20 101.7 175 44.0
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 7.9e-20 101.3 175 42.9
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 1.0e-19 100.9 184 44.6
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.8e-19 100.1 187 39.0
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 3.0e-19 99.4 145 46.2
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 3.9e-19 99.0 183 44.8
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 6.7e-19 98.2 154 46.1
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 6.7e-19 98.2 175 42.3
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 6.7e-19 98.2 176 44.9
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.8e-19 97.8 131 47.3
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 1.1e-18 97.4 179 41.9
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.0e-18 96.7 175 42.9
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 2.0e-18 96.7 177 42.4
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 3.3e-18 95.9 183 38.8
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 7.4e-18 94.7 139 44.6
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 7.4e-18 94.7 179 43.0
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 7.4e-18 94.7 157 47.8
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 4.8e-17 92.0 141 44.0
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 6.3e-17 91.7 156 44.2
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 1.1e-16 90.9 164 37.8
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 1.4e-16 90.5 148 40.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 5.3e-16 88.6 139 42.4
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 5.3e-16 88.6 179 40.2
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 2.6e-15 86.3 164 40.9
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 3.4e-15 85.9 180 38.9
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.9e-15 85.1 99 47.5
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 5.9e-15 85.1 138 41.3
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 1.0e-14 84.3 88 52.3
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 1.3e-14 84.0 166 39.8
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 1.7e-14 83.6 127 44.9
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.7e-14 83.6 179 39.7
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 3.8e-14 82.4 173 37.0
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.1e-13 80.9 157 42.7
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 1.4e-13 80.5 97 49.5
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 1.4e-13 80.5 91 51.6
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 2.5e-13 79.7 151 39.1
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 2.5e-13 79.7 151 42.4
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 5.5e-13 78.6 161 42.9
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 1.6e-12 77.0 151 41.7
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 6.1e-12 75.1 126 42.9
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 1.0e-11 74.3 138 39.1
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 1.4e-11 73.9 147 44.9
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 1.8e-11 73.6 108 45.4
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 5.2e-11 72.0 91 47.3
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 6.7e-11 71.6 157 40.1
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 1.1e-10 70.9 96 46.9
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 9.7e-10 67.8 91 45.1
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 2.8e-09 66.2 176 33.0
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 3.7e-09 65.9 145 35.9
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 4.8e-09 65.5 145 37.2
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.1e-08 64.3 64 51.6
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 1.1e-08 64.3 165 36.4
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 5.3e-08 62.0 107 39.3
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 9.1e-08 61.2 166 34.9
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 2.6e-07 59.7 76 48.7
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 5.9e-07 58.5 133 36.1
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 5.0e-06 55.5 64 53.1


User provided reference genes

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