Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 9.8e-175 616.7 311 100.0
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 7.9e-108 394.4 252 78.2
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 7.5e-82 308.1 313 55.3
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 8.3e-81 304.7 316 55.1
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 1.4e-80 303.9 214 70.6
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 7.0e-80 301.6 201 72.6
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.2e-79 300.8 199 74.4
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 2.0e-79 300.1 300 54.7
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 2.7e-79 299.7 221 67.0
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 5.9e-79 298.5 199 73.4
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 7.7e-79 298.1 207 70.0
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 7.7e-79 298.1 199 73.4
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.0e-78 297.7 207 69.6
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 1.7e-78 297.0 309 56.6
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 2.9e-78 296.2 199 72.9
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 5.0e-78 295.4 199 72.4
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 1.1e-77 294.3 199 72.9
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.9e-77 293.5 253 60.9
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 3.2e-77 292.7 217 68.2
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 3.2e-77 292.7 203 70.0
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 4.2e-77 292.4 225 65.8
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 4.2e-77 292.4 288 55.6
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 5.5e-77 292.0 259 58.3
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 1.6e-76 290.4 222 64.0
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 2.1e-76 290.0 222 64.9
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 3.6e-76 289.3 210 67.6
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 8.0e-76 288.1 204 68.6
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 2.3e-75 286.6 325 52.6
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 2.3e-75 286.6 206 69.9
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 3.0e-75 286.2 218 64.7
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 4.0e-75 285.8 215 65.1
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 6.8e-75 285.0 279 55.9
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 8.8e-75 284.6 197 72.1
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 8.8e-75 284.6 220 62.7
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 1.2e-74 284.3 203 69.5
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 1.2e-74 284.3 199 68.8
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 2.0e-74 283.5 220 64.1
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 2.6e-74 283.1 223 62.8
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.6e-74 283.1 197 72.1
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 3.4e-74 282.7 199 69.8
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 4.4e-74 282.3 216 63.4
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 4.4e-74 282.3 226 63.3
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.3e-73 280.8 222 63.5
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.2e-73 280.0 197 71.6
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 3.7e-73 279.3 199 70.9
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.9e-73 278.9 243 57.6
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 6.3e-73 278.5 227 60.8
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 1.1e-72 277.7 199 67.8
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 1.4e-72 277.3 288 53.5
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 1.4e-72 277.3 221 62.4
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 1.4e-72 277.3 221 62.4
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 1.4e-72 277.3 208 64.9
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.4e-72 277.3 268 56.0
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.8e-72 276.9 223 61.4
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 2.4e-72 276.6 213 65.7
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 2.4e-72 276.6 312 51.0
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 2.4e-72 276.6 214 63.6
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 3.1e-72 276.2 221 62.0
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 4.1e-72 275.8 278 52.9
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 5.4e-72 275.4 218 62.4
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 5.4e-72 275.4 221 62.0
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 5.4e-72 275.4 218 61.9
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 5.4e-72 275.4 217 63.1
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 7.0e-72 275.0 204 65.7
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 9.1e-72 274.6 216 63.4
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 9.1e-72 274.6 218 61.9
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 1.2e-71 274.2 303 51.8
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 1.6e-71 273.9 214 63.6
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 2.7e-71 273.1 274 52.9
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 3.5e-71 272.7 260 55.8
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 4.5e-71 272.3 218 61.0
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 4.5e-71 272.3 279 53.0
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 5.9e-71 271.9 274 53.3
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 1.3e-70 270.8 217 61.3
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 1.3e-70 270.8 201 64.2
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 2.9e-70 269.6 200 64.0
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 3.8e-70 269.2 292 52.7
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.5e-69 267.3 223 61.0
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 2.1e-68 263.5 213 61.0
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 6.1e-68 261.9 227 58.6
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 1.4e-67 260.8 197 66.5
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 5.7e-66 255.4 202 68.3
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.7e-65 253.8 178 69.1
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 2.8e-65 253.1 317 49.2
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.4e-64 250.8 305 46.2
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 9.2e-64 248.1 215 59.1
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 2.7e-63 246.5 207 58.9
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 1.1e-61 241.1 172 68.0
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.6e-60 237.3 197 56.3
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.1e-60 236.9 205 59.0
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.7e-57 227.3 179 63.1
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 8.3e-57 224.9 245 51.4
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 1.4e-56 224.2 271 46.9
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 1.0e-54 218.0 211 56.9
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 5.0e-54 215.7 257 47.1
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.7e-52 209.1 152 71.1
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 4.3e-45 186.0 146 64.4
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 4.3e-45 186.0 135 68.9
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 1.1e-43 181.4 215 49.8
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 6.8e-43 178.7 197 46.2
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 4.1e-40 169.5 212 46.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.9e-37 160.6 97 77.3
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 4.7e-36 156.0 99 78.8
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 3.4e-34 149.8 199 40.7
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 4.9e-33 146.0 101 69.3
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.3e-30 137.9 200 37.5
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 4.8e-28 129.4 91 64.8
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 6.2e-28 129.0 149 47.7
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 7.9e-23 112.1 99 52.5
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.0e-22 111.7 201 34.3
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 5.8e-18 95.9 64 65.6
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 4.6e-15 86.3 75 58.7
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 2.3e-14 84.0 90 50.0
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 1.9e-13 80.9 112 42.9
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 3.7e-12 76.6 69 53.6
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 1.8e-11 74.3 58 60.3
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 3.4e-10 70.1 71 52.1
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 7.1e-08 62.4 55 52.7
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 4.6e-07 59.7 55 54.5
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.9e-06 56.6 110 33.6


User provided reference genes

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