Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g018630 Amaranthus hybridus HOM05D000586 ORTHO05D008681 8.1e-115 417.2 220 100.0
EL10Ac9g21609 Beta vulgaris HOM05D000586 ORTHO05D008681 2.8e-83 312.4 220 76.4
AUR62010365 Chenopodium quinoa HOM05D000586 ORTHO05D008681 6.7e-77 291.2 220 74.5
AUR62016853 Chenopodium quinoa HOM05D000586 ORTHO05D008681 1.3e-75 287.0 220 72.7
MD00G1066800 Malus domestica HOM05D000586 ORTHO05D008681 2.9e-64 249.2 218 67.0
Hund06294 Selenicereus undatus HOM05D000586 ORTHO05D008681 1.4e-63 246.9 184 72.3
Prupe.8G082300 Prunus persica HOM05D000586 ORTHO05D008681 2.5e-63 246.1 205 68.3
Dinv41988 Davidia involucrata HOM05D000586 ORTHO05D008681 7.2e-63 244.6 218 61.9
BolC7t46503H Brassica oleracea HOM05D000586 ORTHO05D008681 1.6e-62 243.4 217 63.1
Potri.004G164200 Populus trichocarpa HOM05D000586 ORTHO05D008681 2.1e-62 243.0 173 76.3
Nn6g32309 Nelumbo nucifera HOM05D000586 ORTHO05D008681 2.7e-62 242.7 174 75.3
C07p60740 Brassica napus HOM05D000586 ORTHO05D001010 3.6e-62 242.3 216 62.5
CiPaw.05G074600 Carya illinoinensis HOM05D000586 ORTHO05D008681 6.1e-62 241.5 173 74.6
Gohir.D13G090500 Gossypium hirsutum HOM05D000586 ORTHO05D008681 6.1e-62 241.5 172 74.4
Gorai.001G244200 Gossypium raimondii HOM05D000586 ORTHO05D008681 1.0e-61 240.7 218 64.2
Ciclev10029227m.g Citrus clementina HOM05D000586 ORTHO05D008681 5.1e-61 238.4 174 75.3
Manes.11G092006 Manihot esculenta HOM05D000586 ORTHO05D008681 6.7e-61 238.0 177 74.0
Haze_02225 Corylus avellana HOM05D000586 ORTHO05D008681 1.1e-60 237.3 173 72.8
QL11p046751 Quercus lobata HOM05D000586 ORTHO05D008681 1.1e-60 237.3 173 72.3
RcHm_v2.0_Chr6g0268531 Rosa chinensis HOM05D000586 ORTHO05D008681 1.1e-60 237.3 178 71.3
Sabra04G0110300 Salix brachista HOM05D000586 ORTHO05D008681 1.5e-60 236.9 173 74.6
FAN20G2293 Fragaria x ananassa HOM05D000586 ORTHO05D008681 2.0e-60 236.5 178 70.8
SalBow6G4654 Salvia bowleyana HOM05D000586 ORTHO05D008681 2.0e-60 236.5 176 73.9
Sc08g0000980 Simmondsia chinensis HOM05D000586 ORTHO05D008681 2.0e-60 236.5 220 63.6
Aa31LG2G15790 Aethionema arabicum HOM05D000586 ORTHO05D008681 2.6e-60 236.1 174 73.6
Duzib052G0483 Durio zibethinus HOM05D000586 ORTHO05D008681 2.6e-60 236.1 172 75.0
PSO170G6416 Papaver somniferum HOM05D000586 ORTHO05D008681 2.6e-60 236.1 207 65.2
PGR042G2570 Punica granatum HOM05D000586 ORTHO05D008681 2.6e-60 236.1 178 72.5
BcaNung04297 Brassica carinata HOM05D000586 ORTHO05D008681 3.3e-60 235.7 227 60.8
FAN24G2793 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.3e-60 235.7 178 70.8
AT4G34730 Arabidopsis thaliana HOM05D000586 ORTHO05D008681 5.7e-60 235.0 210 61.4
MBI05_g26502_MAGBIO Magnolia biondii HOM05D000586 ORTHO05D008681 5.7e-60 235.0 223 60.5
arahy.Tifrunner.gnm1.ann1.89FNHL Arachis hypogaea HOM05D000586 ORTHO05D008681 9.7e-60 234.2 175 73.1
BraA01t00363Z Brassica rapa HOM05D000586 ORTHO05D008681 9.7e-60 234.2 227 60.4
FvH4_2g10740 Fragaria vesca HOM05D000586 ORTHO05D008681 9.7e-60 234.2 178 70.8
Nitab4.5_0002096g0050 Nicotiana tabacum HOM05D000586 ORTHO05D008681 9.7e-60 234.2 176 72.7
Thecc.02G073100 Theobroma cacao HOM05D000586 ORTHO05D008681 1.3e-59 233.8 172 73.8
Sp7g32510 Schrenkiella parvula HOM05D000586 ORTHO05D008681 1.7e-59 233.4 227 59.5
TAR381G1606 Trochodendron aralioides HOM05D000586 ORTHO05D008681 1.7e-59 233.4 173 73.4
AL7G16470 Arabidopsis lyrata HOM05D000586 ORTHO05D008681 2.2e-59 233.0 229 60.3
Thhalv10026220m.g Eutrema salsugineum HOM05D000586 ORTHO05D008681 2.2e-59 233.0 172 72.7
PSO210G2611 Papaver somniferum HOM05D000586 ORTHO05D008681 2.2e-59 233.0 207 64.7
BcaNung00666 Brassica carinata HOM05D000586 ORTHO05D008681 2.8e-59 232.6 227 59.9
A01p03780 Brassica napus HOM05D000586 ORTHO05D003356 2.8e-59 232.6 225 59.6
Nitab4.5_0010885g0020 Nicotiana tabacum HOM05D000586 ORTHO05D008681 2.8e-59 232.6 176 71.6
THA.LOC104807288 Tarenaya hassleriana HOM05D000586 ORTHO05D008681 2.8e-59 232.6 227 61.7
Cpa.g.sc150.2 Carica papaya HOM05D000586 ORTHO05D008681 3.7e-59 232.3 215 63.7
MSTRG.20023 Avicennia marina HOM05D000586 ORTHO05D008681 6.3e-59 231.5 173 71.7
Peaxi162Scf00362g01176 Petunia axillaris HOM05D000586 ORTHO05D008681 8.2e-59 231.1 173 72.8
C01p04060 Brassica napus HOM05D000586 ORTHO05D003356 1.1e-58 230.7 225 59.6
Lj1g0002953 Lotus japonicus HOM05D000586 ORTHO05D008681 1.4e-58 230.3 172 70.9
BolC1t00397H Brassica oleracea HOM05D000586 ORTHO05D003356 2.4e-58 229.6 224 59.8
Actinidia20476 Actinidia chinensis HOM05D000586 ORTHO05D008681 3.1e-58 229.2 172 72.7
CARHR243030 Cardamine hirsuta HOM05D000586 ORTHO05D008681 3.1e-58 229.2 172 70.9
FAN15G3000 Fragaria x ananassa HOM05D000586 ORTHO05D008681 3.1e-58 229.2 168 73.2
arahy.Tifrunner.gnm1.ann1.I5P0FU Arachis hypogaea HOM05D000586 ORTHO05D008681 4.1e-58 228.8 172 73.3
Carub.0007s0556 Capsella rubella HOM05D000586 ORTHO05D008681 4.1e-58 228.8 203 62.6
Dinv23444 Davidia involucrata HOM05D000586 ORTHO05D008681 6.9e-58 228.0 180 70.6
Phvul.009G002100 Phaseolus vulgaris HOM05D000586 ORTHO05D008681 6.9e-58 228.0 171 70.2
Solyc01g110550.3 Solanum lycopersicum HOM05D000586 ORTHO05D008681 6.9e-58 228.0 171 72.5
ClCG11G003770 Citrullus lanatus HOM05D000586 ORTHO05D008681 9.1e-58 227.6 175 69.7
Sed0014971 Sechium edule HOM05D000586 ORTHO05D008681 1.2e-57 227.3 219 60.3
Lalb_Chr16g0391381 Lupinus albus HOM05D000586 ORTHO05D008681 2.6e-57 226.1 172 72.1
Glyma.06G007300 Glycine max HOM05D000586 ORTHO05D008681 3.4e-57 225.7 171 70.8
Lsat_1_v5_gn_4_67621 Lactuca sativa HOM05D000586 ORTHO05D008681 5.9e-57 224.9 175 69.1
PGSC0003DMG400001616 Solanum tuberosum HOM05D000586 ORTHO05D008681 5.9e-57 224.9 171 71.9
Eucgr.G01743 Eucalyptus grandis HOM05D000586 ORTHO05D008681 7.7e-57 224.6 168 72.6
Migut.B00127 Erythranthe guttata HOM05D000586 ORTHO05D008681 1.0e-56 224.2 178 70.2
Sopen01g052670 Solanum pennellii HOM05D000586 ORTHO05D008681 1.3e-56 223.8 171 71.9
VMungo1309G1236 Vigna mungo HOM05D000586 ORTHO05D008681 1.3e-56 223.8 171 68.4
CsaV3_2G015360 Cucumis sativus L. HOM05D000586 ORTHO05D008681 2.2e-56 223.0 227 56.8
A03p63110 Brassica napus HOM05D000586 ORTHO05D001010 2.9e-56 222.6 226 58.4
BraA03t15387Z Brassica rapa HOM05D000586 ORTHO05D008681 2.9e-56 222.6 226 58.4
COL.COLO4_10614 Corchorus olitorius HOM05D000586 ORTHO05D008681 5.0e-56 221.9 139 82.0
Aqoxy5G01445 Aquilegia oxysepala HOM05D000586 ORTHO05D008681 6.5e-56 221.5 221 58.8
CAN.G1329.7 Capsicum annuum HOM05D000586 ORTHO05D008681 6.5e-56 221.5 219 60.7
Medtr3g117600 Medicago truncatula HOM05D000586 ORTHO05D008681 1.1e-55 220.7 182 67.0
Zm00001eb377790 Zea mays HOM05D000586 ORTHO05D008681 1.4e-55 220.3 180 65.6
Oeu020677.1 Olea europaea HOM05D000586 ORTHO05D008681 1.9e-55 219.9 175 69.7
HanXRQChr10g0294191 Helianthus annuus HOM05D000586 ORTHO05D008681 5.5e-55 218.4 169 72.2
ECA234G3975 Erigeron canadensis HOM05D000586 ORTHO05D008681 1.2e-54 217.2 160 71.9
DCAR_022927 Daucus carota HOM05D000586 ORTHO05D008681 7.9e-54 214.5 172 68.0
CANSAT11G1696 Cannabis sativa HOM05D000586 ORTHO05D008681 1.8e-53 213.4 125 84.8
Ca_15328_v3 Cicer arietinum L. HOM05D000586 ORTHO05D008681 2.3e-53 213.0 180 64.4
Hma1.2p1_0032F.1_g019990 Hydrangea macrophylla HOM05D000586 ORTHO05D008681 1.5e-52 210.3 124 83.9
CDE01G0237 Ceratophyllum demersum HOM05D000586 ORTHO05D008681 2.0e-52 209.9 196 62.2
HPP92_020672 Vanilla planifolia HOM05D000586 ORTHO05D008681 3.3e-52 209.1 199 61.8
Lj9A383T66 Lonicera japonica HOM05D000586 ORTHO05D008681 5.7e-52 208.4 134 77.6
MELO3C020750.2 Cucumis melo HOM05D000586 ORTHO05D008681 9.7e-52 207.6 205 58.0
Psat5g000280 Pisum sativum HOM05D000586 ORTHO05D008681 9.7e-52 207.6 184 64.7
Gohir.A13G086800 Gossypium hirsutum HOM05D000586 ORTHO05D008681 3.7e-51 205.7 172 68.0
unitig_60.g25431 Utricularia gibba HOM05D000586 ORTHO05D008681 1.1e-50 204.1 163 70.6
Os06g0137600 Oryza sativa ssp. japonica HOM05D000586 ORTHO05D008681 5.3e-50 201.8 178 63.5
VMungo1309G1424 Vigna mungo HOM05D000586 ORTHO05D008681 2.2e-48 196.4 121 78.5
Lj9A385G33 Lonicera japonica HOM05D000586 ORTHO05D008681 8.5e-48 194.5 122 79.5
Cc02_g16800 Coffea canephora HOM05D000586 ORTHO05D008681 1.5e-47 193.7 151 70.2
SMO337G0057 Selaginella moellendorffii HOM05D000586 ORTHO05D008681 3.2e-47 192.6 167 59.9
vmacro02046 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.2e-46 190.7 122 77.0
vmacro22695 Vaccinium macrocarpon HOM05D000586 ORTHO05D008681 1.2e-46 190.7 122 77.0
GSVIVG01024154001 Vitis vinifera HOM05D000586 ORTHO05D008681 1.2e-46 190.7 149 70.5
Oeu046110.1 Olea europaea HOM05D000586 ORTHO05D008681 2.7e-46 189.5 159 67.9
Rhsim11G0184900 Rhododendron simsii HOM05D000586 ORTHO05D008681 1.2e-44 184.1 174 60.9
AagrBONN_evm.TU.Sc2ySwM_228.435 Anthoceros agrestis HOM05D000586 ORTHO05D008681 2.6e-44 183.0 137 65.0
SGA_v2.0_scaffold58G20435 Striga asiatica HOM05D000586 ORTHO05D008681 3.3e-44 182.6 263 45.2
Duzib132G1196 Durio zibethinus HOM05D000586 ORTHO05D008681 2.2e-43 179.9 198 57.1
TPR.G32182 Trifolium pratense HOM05D000586 ORTHO05D008681 1.3e-40 170.6 149 61.7
Pp3c12_16410 Physcomitrium patens HOM05D000586 ORTHO05D008681 1.7e-40 170.2 155 56.8
CBR_g38914 Chara braunii HOM05D000586 ORTHO05D008681 1.2e-38 164.1 162 53.7
Mapoly0005s0278 Marchantia polymorpha HOM05D000586 ORTHO05D008681 1.2e-38 164.1 146 58.9
MCO15G163 Micromonas commoda HOM05D000586 ORTHO05D008681 1.1e-31 141.0 192 42.2
CSS0047409 Camellia sinensis var. sinensis HOM05D000586 ORTHO05D008681 3.1e-26 122.9 112 63.4
Sed0014045 Sechium edule HOM05D000586 ORTHO05D008681 4.1e-26 122.5 168 46.4
SEGI_30788 Sequoiadendron giganteum HOM05D000586 ORTHO05D008681 4.1e-26 122.5 98 61.2
ATR0910G002 Amborella trichopoda HOM05D000586 ORTHO05D008681 1.6e-25 120.6 119 57.1
Cre02.g145000 Chlamydomonas reinhardtii HOM05D000586 ORTHO05D008681 5.0e-24 115.5 164 39.6
Nn017s41473 Nelumbo nucifera HOM05D000586 ORTHO05D008681 3.0e-21 106.3 66 81.8
Atru.chr5.3178 Acer truncatum HOM05D000586 ORTHO05D008681 4.4e-20 102.4 101 61.4
PRCOL_00004217 Prasinoderma coloniale HOM05D000586 ORTHO05D008681 2.2e-19 100.1 156 36.5
BcaB07g33434 Brassica carinata HOM05D000586 ORTHO05D008681 7.0e-18 95.1 71 71.8
VMungo0720G0167 Vigna mungo HOM05D000028 ORTHO05D001812 7.0e-18 95.1 91 59.3
MD10G1061600 Malus domestica HOM05D000586 ORTHO05D008681 8.3e-11 71.6 148 37.8


User provided reference genes

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