Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g015180 Amaranthus hybridus HOM05D006713 ORTHO05D008601 1.3e-246 855.9 410 100.0
EL10Ac9g20760 Beta vulgaris HOM05D006713 ORTHO05D008601 1.8e-168 596.3 449 66.6
AUR62038189 Chenopodium quinoa HOM05D006713 ORTHO05D008601 5.1e-155 551.6 365 72.9
Sc21g0002760 Simmondsia chinensis HOM05D006713 ORTHO05D008601 1.0e-147 527.3 391 65.5
Hund01101 Selenicereus undatus HOM05D006713 ORTHO05D008601 3.9e-147 525.4 471 58.6
QL02p049491 Quercus lobata HOM05D006713 ORTHO05D008601 1.4e-144 516.9 338 70.4
QL08p038662 Quercus lobata HOM05D006713 ORTHO05D008601 1.4e-144 516.9 338 70.4
GSVIVG01020539001 Vitis vinifera HOM05D006713 ORTHO05D008601 6.9e-144 514.6 330 72.4
Eucgr.A01814 Eucalyptus grandis HOM05D006713 ORTHO05D008601 1.2e-140 503.8 327 71.9
TWI18G1058 Tripterygium wilfordii HOM05D006713 ORTHO05D008601 1.6e-140 503.4 330 70.3
CSS0037354 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 2.7e-140 502.7 369 65.6
Dinv26425 Davidia involucrata HOM05D006713 ORTHO05D008601 1.3e-137 493.8 357 66.7
Gohir.A03G157000 Gossypium hirsutum HOM05D006713 ORTHO05D008601 1.1e-136 490.7 395 61.8
THA.LOC104815960 Tarenaya hassleriana HOM05D006713 ORTHO05D008601 1.1e-136 490.7 327 68.8
Atru.chr6.3001 Acer truncatum HOM05D006713 ORTHO05D008601 1.8e-136 490.0 342 67.8
Gohir.D02G180200 Gossypium hirsutum HOM05D006713 ORTHO05D008601 3.1e-136 489.2 395 61.8
Duzib052G0863 Durio zibethinus HOM05D006713 ORTHO05D008601 5.3e-136 488.4 329 69.0
Gorai.005G201900 Gossypium raimondii HOM05D006713 ORTHO05D008601 5.3e-136 488.4 395 61.5
RcHm_v2.0_Chr2g0126401 Rosa chinensis HOM05D006713 ORTHO05D008601 5.3e-136 488.4 328 69.8
Actinidia09856 Actinidia chinensis HOM05D006713 ORTHO05D008601 6.9e-136 488.0 318 71.4
TAR235G0002 Trochodendron aralioides HOM05D006713 ORTHO05D008601 9.1e-136 487.6 372 63.7
Ciclev10015547m.g Citrus clementina HOM05D006713 ORTHO05D008601 1.2e-135 487.3 340 68.5
FvH4_6g26190 Fragaria vesca HOM05D006713 ORTHO05D008601 1.5e-135 486.9 349 65.9
CANSAT78G0617 Cannabis sativa HOM05D006713 ORTHO05D008601 2.6e-135 486.1 371 64.4
FAN05G2673 Fragaria x ananassa HOM05D006713 ORTHO05D008601 2.6e-135 486.1 328 68.6
Glyma.13G297500 Glycine max HOM05D006713 ORTHO05D008601 2.2e-134 483.0 337 67.1
Aqoxy1G02470 Aquilegia oxysepala HOM05D006713 ORTHO05D008601 8.5e-134 481.1 392 60.7
arahy.Tifrunner.gnm1.ann1.Q4ZJSX Arachis hypogaea HOM05D006713 ORTHO05D008601 1.1e-133 480.7 329 68.7
arahy.Tifrunner.gnm1.ann1.FW5TAU Arachis hypogaea HOM05D006713 ORTHO05D008601 1.4e-133 480.3 329 68.7
Potri.013G132100 Populus trichocarpa HOM05D006713 ORTHO05D008601 1.4e-133 480.3 360 64.2
Lalb_Chr14g0366891 Lupinus albus HOM05D006713 ORTHO05D008601 1.9e-133 479.9 326 69.3
VMungo1080G0618 Vigna mungo HOM05D006713 ORTHO05D008601 2.5e-133 479.6 327 68.5
FAN02G3934 Fragaria x ananassa HOM05D006713 ORTHO05D008601 3.2e-133 479.2 366 63.4
MD17G1241000 Malus domestica HOM05D006713 ORTHO05D008601 4.2e-133 478.8 403 61.3
Nn1g06572 Nelumbo nucifera HOM05D006713 ORTHO05D008601 4.2e-133 478.8 360 65.3
FAN09G0901 Fragaria x ananassa HOM05D006713 ORTHO05D008601 7.2e-133 478.0 328 67.7
Sabra13G0111600 Salix brachista HOM05D006713 ORTHO05D008601 5.1e-131 471.9 379 60.4
MBI06_g06484_MAGBIO Magnolia biondii HOM05D006713 ORTHO05D008601 1.5e-130 470.3 348 64.1
Lj3g0026133 Lotus japonicus HOM05D006713 ORTHO05D008601 2.0e-130 469.9 328 68.3
HanXRQChr17g0556501 Helianthus annuus HOM05D006713 ORTHO05D008601 4.4e-130 468.8 345 64.3
CsaV3_6G012990 Cucumis sativus L. HOM05D006713 ORTHO05D008601 9.7e-130 467.6 372 62.1
Hma1.2p1_1201F.1_g266570 Hydrangea macrophylla HOM05D006713 ORTHO05D008601 9.7e-130 467.6 429 55.2
CARHR003020 Cardamine hirsuta HOM05D006713 ORTHO05D008601 1.3e-129 467.2 329 68.1
Peaxi162Scf00132g00240 Petunia axillaris HOM05D006713 ORTHO05D008601 1.3e-129 467.2 338 65.4
DCAR_021241 Daucus carota HOM05D006713 ORTHO05D008601 2.2e-129 466.5 344 62.2
Rhsim06G0143600 Rhododendron simsii HOM05D006713 ORTHO05D008601 4.8e-129 465.3 325 66.5
AT1G03687 Arabidopsis thaliana HOM05D006713 ORTHO05D008601 2.4e-128 463.0 326 67.5
Cpa.g.sc34.156 Carica papaya HOM05D006713 ORTHO05D008601 3.1e-128 462.6 339 64.0
Thhalv10007899m.g Eutrema salsugineum HOM05D006713 ORTHO05D008601 9.1e-128 461.1 329 66.9
AL1G13180 Arabidopsis lyrata HOM05D006713 ORTHO05D008601 1.5e-127 460.3 329 66.3
Sp1g02570 Schrenkiella parvula HOM05D006713 ORTHO05D008601 2.6e-127 459.5 373 61.1
PGSC0003DMG400018345 Solanum tuberosum HOM05D006713 ORTHO05D008601 3.5e-127 459.1 331 64.4
vmacro12297 Vaccinium macrocarpon HOM05D006713 ORTHO05D008601 3.5e-127 459.1 331 65.3
Migut.H01188 Erythranthe guttata HOM05D006713 ORTHO05D008601 1.3e-126 457.2 331 65.9
Carub.0001s0279 Capsella rubella HOM05D006713 ORTHO05D008601 2.2e-126 456.4 326 66.3
Solyc07g054070.4 Solanum lycopersicum HOM05D006713 ORTHO05D008601 2.9e-126 456.1 359 61.6
CDE10G0241 Ceratophyllum demersum HOM05D006713 ORTHO05D008601 5.0e-126 455.3 331 64.7
Aa31LG1G20990 Aethionema arabicum HOM05D006713 ORTHO05D008601 6.5e-126 454.9 329 65.7
BcaC07g42233 Brassica carinata HOM05D006713 ORTHO05D008601 6.5e-126 454.9 329 66.3
Medtr2g090335 Medicago truncatula HOM05D006713 ORTHO05D008601 6.5e-126 454.9 328 64.9
AUR62038063 Chenopodium quinoa HOM05D006713 ORTHO05D008601 8.5e-126 454.5 360 64.4
ECA234G3347 Erigeron canadensis HOM05D006713 ORTHO05D008601 1.1e-125 454.1 331 64.0
MSTRG.12823 Avicennia marina HOM05D006713 ORTHO05D008601 2.5e-125 453.0 331 65.3
CAN.G248.32 Capsicum annuum HOM05D006713 ORTHO05D008601 3.2e-125 452.6 344 63.1
Psat5g271440 Pisum sativum HOM05D006713 ORTHO05D008601 3.2e-125 452.6 341 63.0
A09p68250 Brassica napus HOM05D006713 ORTHO05D008601 1.6e-124 450.3 329 65.3
BraA09t42160Z Brassica rapa HOM05D006713 ORTHO05D008601 1.6e-124 450.3 329 65.3
Lsat_1_v5_gn_8_133201 Lactuca sativa HOM05D006713 ORTHO05D008601 1.6e-124 450.3 392 57.1
BcaC07g42238 Brassica carinata HOM05D006713 ORTHO05D008601 3.6e-124 449.1 329 65.0
BolC8t52795H Brassica oleracea HOM05D006713 ORTHO05D008601 3.6e-124 449.1 329 65.0
C08p52690 Brassica napus HOM05D006713 ORTHO05D008601 6.1e-124 448.4 329 65.0
Cc05_g07100 Coffea canephora HOM05D006713 ORTHO05D008601 8.0e-124 448.0 333 64.3
Lj8A113G48 Lonicera japonica HOM05D006713 ORTHO05D008601 6.5e-118 428.3 333 62.2
HPP92_023892 Vanilla planifolia HOM05D006713 ORTHO05D008601 1.3e-113 414.1 335 60.0
Zm00001eb273220 Zea mays HOM05D006713 ORTHO05D008601 1.3e-113 414.1 325 60.3
HPP92_023829 Vanilla planifolia HOM05D006713 ORTHO05D008601 3.1e-112 409.5 334 59.6
ATR0665G517 Amborella trichopoda HOM05D006713 ORTHO05D008601 9.1e-112 407.9 326 58.6
Haze_13156 Corylus avellana HOM05D006713 ORTHO05D008601 2.7e-111 406.4 329 58.7
CSS0039998 Camellia sinensis var. sinensis HOM05D006713 ORTHO05D008601 1.5e-109 400.6 303 64.4
Manes.12G089598 Manihot esculenta HOM05D006713 ORTHO05D008601 1.0e-107 394.4 289 64.0
Nitab4.5_0002169g0110 Nicotiana tabacum HOM05D006713 ORTHO05D008601 6.8e-107 391.7 353 56.4
Nitab4.5_0000512g0100 Nicotiana tabacum HOM05D006713 ORTHO05D008601 9.8e-106 387.9 350 56.0
ClCG02G017610 Citrullus lanatus HOM05D006713 ORTHO05D008601 8.3e-105 384.8 483 45.5
Prupe.3G137200 Prunus persica HOM05D006713 ORTHO05D008601 2.4e-104 383.3 356 53.9
Phvul.005G104000 Phaseolus vulgaris HOM05D006713 ORTHO05D008601 2.7e-103 379.8 272 64.3
Thecc.02G179100 Theobroma cacao HOM05D006713 ORTHO05D008601 4.5e-103 379.0 241 72.2
PSO541G1719 Papaver somniferum HOM05D006713 ORTHO05D008601 1.5e-101 374.0 409 50.4
PSO675G6747 Papaver somniferum HOM05D006713 ORTHO05D008601 4.7e-100 369.0 344 54.7
Ca_01502_v3 Cicer arietinum L. HOM05D006713 ORTHO05D008601 3.0e-99 366.3 332 54.8
Sopen07g028010 Solanum pennellii HOM05D006713 ORTHO05D008601 5.7e-98 362.1 265 61.9
CiPaw.03G176500 Carya illinoinensis HOM05D006713 ORTHO05D008601 4.6e-95 352.4 263 62.4
unitig_62.g23167 Utricularia gibba HOM05D006713 ORTHO05D008601 7.8e-95 351.7 303 57.4
Sed0026559 Sechium edule HOM05D006713 ORTHO05D008601 1.5e-93 347.4 251 64.1
Mapoly0088s0019 Marchantia polymorpha HOM05D006713 ORTHO05D008601 4.0e-83 312.8 327 48.0
Os06g0342750 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 1.5e-82 310.8 232 61.6
AagrBONN_evm.TU.Sc2ySwM_117.1346 Anthoceros agrestis HOM05D006713 ORTHO05D008601 4.9e-81 305.8 321 47.4
MELO3C013617.2 Cucumis melo HOM05D006713 ORTHO05D008601 2.7e-79 300.1 336 49.1
SGA_v2.0_scaffold109G31136 Striga asiatica HOM05D006713 ORTHO05D007323 2.8e-76 290.0 394 43.4
Glyma.12G203966 Glycine max HOM05D006713 ORTHO05D008601 8.4e-73 278.5 174 71.3
SMO117G0197 Selaginella moellendorffii HOM05D006713 ORTHO05D008601 1.1e-69 268.1 279 48.0
SalBow1G6029 Salvia bowleyana HOM05D006713 ORTHO05D008601 9.6e-69 265.0 233 58.4
CBR_g35040 Chara braunii HOM05D006713 ORTHO05D008601 1.4e-64 251.1 348 41.1
Glyma.12G204032 Glycine max HOM05D006713 ORTHO05D008601 5.9e-34 149.4 100 72.0
SalBow1G1793 Salvia bowleyana HOM05D006713 ORTHO05D008601 2.9e-33 147.1 198 44.4
MELO3C001128.2 Cucumis melo HOM05D006713 ORTHO05D008601 8.7e-30 135.6 78 78.2
Os06g0343000 Oryza sativa ssp. japonica HOM05D006713 ORTHO05D008601 5.0e-25 119.8 90 64.4
MELO3C013610.2 Cucumis melo HOM05D006713 ORTHO05D008601 6.9e-19 99.4 68 73.5
SEGI_39135 Sequoiadendron giganteum HOM05D006713 ORTHO05D008601 1.1e-13 82.0 97 43.3
MELO3C035062.2 Cucumis melo HOM05D006713 ORTHO05D008601 1.6e-10 71.6 39 79.5
Oeu023431.1 Olea europaea HOM05D006713 ORTHO05D008601 3.8e-09 67.0 51 66.7
MELO3C013612.2 Cucumis melo HOM05D006713 ORTHO05D008601 4.2e-08 63.5 57 54.4
Oeu045818.1 Olea europaea HOM05D006713 ORTHO05D008601 1.8e-06 58.2 70 44.3


User provided reference genes

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