Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g013810 Amaranthus hybridus HOM05D005756 ORTHO05D007991 7.7e-267 923.3 488 100.0
AUR62015018 Chenopodium quinoa HOM05D005756 ORTHO05D007991 6.6e-194 681.0 448 74.6
EL10Ac9g22689 Beta vulgaris HOM05D005756 ORTHO05D007991 1.8e-175 619.8 400 75.0
Sc21g0000630 Simmondsia chinensis HOM05D005756 ORTHO05D007991 2.8e-128 463.0 425 55.8
Actinidia35206 Actinidia chinensis HOM05D005756 ORTHO05D007991 7.7e-126 454.9 433 54.7
Peaxi162Scf00802g00236 Petunia axillaris HOM05D005756 ORTHO05D007991 3.8e-125 452.6 442 53.4
Nitab4.5_0000006g0690 Nicotiana tabacum HOM05D005756 ORTHO05D007991 2.5e-124 449.9 422 54.5
Peaxi162Scf00218g00178 Petunia axillaris HOM05D005756 ORTHO05D007991 3.3e-124 449.5 434 52.8
Oeu021293.1 Olea europaea HOM05D005756 ORTHO05D007991 4.3e-124 449.1 427 53.2
CSS0006225 Camellia sinensis var. sinensis HOM05D005756 ORTHO05D007991 5.6e-124 448.7 437 54.9
CAN.G60.7 Capsicum annuum HOM05D005756 ORTHO05D007991 8.0e-123 444.9 422 54.3
SalBow1G0676 Salvia bowleyana HOM05D005756 ORTHO05D007991 1.7e-120 437.2 425 52.2
Solyc05g041220.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 3.7e-120 436.0 432 53.0
MD09G1126000 Malus domestica HOM05D005756 ORTHO05D007991 4.9e-120 435.6 436 51.6
Nn1g03213 Nelumbo nucifera HOM05D005756 ORTHO05D007991 6.4e-120 435.3 437 53.1
Nitab4.5_0010487g0010 Nicotiana tabacum HOM05D005756 ORTHO05D007991 1.1e-119 434.5 424 52.8
SalBow1G7885 Salvia bowleyana HOM05D005756 ORTHO05D007991 7.0e-119 431.8 422 53.1
Actinidia18810 Actinidia chinensis HOM05D005756 ORTHO05D007991 3.5e-118 429.5 435 52.2
Lsat_1_v5_gn_7_97180 Lactuca sativa HOM05D005756 ORTHO05D007991 2.3e-117 426.8 444 49.3
Rhsim04G0027400 Rhododendron simsii HOM05D005756 ORTHO05D007991 2.3e-117 426.8 468 50.2
AL7G44670 Arabidopsis lyrata HOM05D005756 ORTHO05D007991 3.0e-117 426.4 443 52.8
AT5G35770 Arabidopsis thaliana HOM05D005756 ORTHO05D007991 6.6e-117 425.2 443 52.4
FvH4_6g40720 Fragaria vesca HOM05D005756 ORTHO05D007991 8.6e-117 424.9 423 51.5
FAN14G2144 Fragaria x ananassa HOM05D005756 ORTHO05D007991 1.1e-116 424.5 423 51.5
Gorai.001G221400 Gossypium raimondii HOM05D005756 ORTHO05D007991 2.5e-116 423.3 422 51.4
THA.LOC104815437 Tarenaya hassleriana HOM05D005756 ORTHO05D007991 2.5e-116 423.3 426 53.5
TAR629G3088 Trochodendron aralioides HOM05D005756 ORTHO05D007991 3.3e-116 422.9 437 51.5
ECA236G0821 Erigeron canadensis HOM05D005756 ORTHO05D007991 5.6e-116 422.2 428 52.3
Sp7g06350 Schrenkiella parvula HOM05D005756 ORTHO05D007991 9.5e-116 421.4 428 54.2
Carub.0007s3155 Capsella rubella HOM05D005756 ORTHO05D007991 1.2e-115 421.0 427 53.6
Gohir.A07G191400 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.2e-115 421.0 422 51.2
AUR62029095 Chenopodium quinoa HOM05D005756 ORTHO05D007991 2.1e-115 420.2 268 77.2
FAN05G2330 Fragaria x ananassa HOM05D005756 ORTHO05D007991 3.6e-115 419.5 421 50.4
Duzib133G1068 Durio zibethinus HOM05D005756 ORTHO05D007991 1.0e-114 417.9 422 51.2
Hma1.2p1_0545F.1_g176030 Hydrangea macrophylla HOM05D005756 ORTHO05D007991 2.3e-114 416.8 390 56.7
Aa31sc373G50 Aethionema arabicum HOM05D005756 ORTHO05D007991 3.1e-114 416.4 442 49.8
BcaB06g26996 Brassica carinata HOM05D005756 ORTHO05D007991 3.1e-114 416.4 444 52.3
A04p10010 Brassica napus HOM05D005756 ORTHO05D007991 4.0e-114 416.0 444 52.3
BolC4t25929H Brassica oleracea HOM05D005756 ORTHO05D007991 4.0e-114 416.0 444 52.0
BraA04t16663Z Brassica rapa HOM05D005756 ORTHO05D007991 4.0e-114 416.0 444 52.3
GSVIVG01030075001 Vitis vinifera HOM05D005756 ORTHO05D007991 5.2e-114 415.6 442 50.9
BcaC02g09499 Brassica carinata HOM05D005756 ORTHO05D007991 6.8e-114 415.2 444 52.0
Gohir.D07G171500 Gossypium hirsutum HOM05D005756 ORTHO05D007991 6.8e-114 415.2 422 49.1
HanXRQChr11g0328881 Helianthus annuus HOM05D005756 ORTHO05D007991 6.8e-114 415.2 434 49.8
Cc00_g15460 Coffea canephora HOM05D005756 ORTHO05D007991 1.2e-113 414.5 391 54.5
C04p43490 Brassica napus HOM05D005756 ORTHO05D007991 1.5e-113 414.1 444 51.8
COL.COLO4_33341 Corchorus olitorius HOM05D005756 ORTHO05D007991 2.0e-113 413.7 425 50.6
Thecc.01G193500 Theobroma cacao HOM05D005756 ORTHO05D007991 2.6e-113 413.3 425 49.9
Gorai.001G191800 Gossypium raimondii HOM05D005756 ORTHO05D007991 5.8e-113 412.1 422 48.6
FAN09G1647 Fragaria x ananassa HOM05D005756 ORTHO05D007991 7.5e-113 411.8 423 50.4
Gohir.A07G164300 Gossypium hirsutum HOM05D005756 ORTHO05D007991 1.3e-112 411.0 422 48.6
Potri.014G166400 Populus trichocarpa HOM05D005756 ORTHO05D007991 2.9e-112 409.8 424 51.7
Haze_12636 Corylus avellana HOM05D005756 ORTHO05D007991 3.7e-112 409.5 426 51.9
RcHm_v2.0_Chr2g0156171 Rosa chinensis HOM05D005756 ORTHO05D007991 3.7e-112 409.5 419 49.9
Migut.K00325 Erythranthe guttata HOM05D005756 ORTHO05D007991 8.3e-112 408.3 444 50.0
Duzib211G0508 Durio zibethinus HOM05D005756 ORTHO05D007991 1.9e-111 407.1 423 49.4
MELO3C025971.2 Cucumis melo HOM05D005756 ORTHO05D007991 4.1e-111 406.0 427 50.1
CsaV3_6G009540 Cucumis sativus L. HOM05D005756 ORTHO05D007991 9.2e-111 404.8 427 50.1
Manes.12G064800 Manihot esculenta HOM05D005756 ORTHO05D007991 1.2e-110 404.4 427 49.9
Sabra14G0126700 Salix brachista HOM05D005756 ORTHO05D007991 1.2e-110 404.4 424 51.9
ClCG02G009290 Citrullus lanatus HOM05D005756 ORTHO05D007991 1.6e-110 404.1 427 50.6
vmacro09483 Vaccinium macrocarpon HOM05D005756 ORTHO05D007991 6.0e-110 402.1 390 53.6
Nitab4.5_0005267g0030 Nicotiana tabacum HOM05D005756 ORTHO05D007991 7.8e-110 401.7 390 53.1
Oeu052200.1 Olea europaea HOM05D005756 ORTHO05D007991 1.0e-109 401.4 476 45.6
Migut.J01345 Erythranthe guttata HOM05D005756 ORTHO05D007991 2.3e-109 400.2 433 49.7
CiPaw.03G281000 Carya illinoinensis HOM05D005756 ORTHO05D007991 5.0e-109 399.1 418 49.8
Ciclev10018016m.g Citrus clementina HOM05D005756 ORTHO05D007991 8.6e-109 398.3 429 50.8
Manes.13G062400 Manihot esculenta HOM05D005756 ORTHO05D007991 3.3e-108 396.4 428 48.4
DCAR_019686 Daucus carota HOM05D005756 ORTHO05D001984 7.3e-108 395.2 393 52.4
PSO675G1451 Papaver somniferum HOM05D005756 ORTHO05D007991 2.1e-107 393.7 441 49.7
Prupe.3G198700 Prunus persica HOM05D005756 ORTHO05D007991 8.1e-107 391.7 431 48.7
Lj1C795T0 Lonicera japonica HOM05D005756 ORTHO05D007991 1.4e-106 391.0 387 52.5
PGR042G1143 Punica granatum HOM05D005756 ORTHO05D007991 1.4e-106 391.0 423 48.9
Dinv26618 Davidia involucrata HOM05D005756 ORTHO05D007991 1.8e-106 390.6 437 49.7
Oeu027646.1 Olea europaea HOM05D005756 ORTHO05D007991 3.1e-106 389.8 397 49.6
CANSAT64G2821 Cannabis sativa HOM05D005756 ORTHO05D007991 2.0e-105 387.1 421 47.5
Sed0018608 Sechium edule HOM05D005756 ORTHO05D007991 2.0e-105 387.1 439 47.8
PSO541G4672 Papaver somniferum HOM05D005756 ORTHO05D007991 5.8e-105 385.6 441 49.0
QL08p028191 Quercus lobata HOM05D005756 ORTHO05D007991 2.2e-104 383.6 459 47.7
Aqoxy4G02252 Aquilegia oxysepala HOM05D005756 ORTHO05D007991 2.9e-104 383.3 444 48.9
Sed0020254 Sechium edule HOM05D005756 ORTHO05D007991 1.1e-103 381.3 426 47.9
Gohir.D07G197700 Gossypium hirsutum HOM05D005756 ORTHO05D007991 9.2e-103 378.3 384 50.5
Thhalv10005699m.g Eutrema salsugineum HOM05D005756 ORTHO05D007991 1.2e-102 377.9 391 51.9
MD17G1116000 Malus domestica HOM05D005756 ORTHO05D007991 5.1e-101 372.5 386 50.5
SHI10154 Sapria himalayana HOM05D005756 ORTHO05D007991 5.1e-101 372.5 485 44.1
unitig_0.g2684 Utricularia gibba HOM05D005756 ORTHO05D007991 5.1e-101 372.5 513 42.3
CDE06G1141 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 1.5e-100 370.9 442 45.9
HanXRQChr04g0126551 Helianthus annuus HOM05D005756 ORTHO05D007991 1.5e-100 370.9 385 49.1
PGSC0003DMG400018834 Solanum tuberosum HOM05D005756 ORTHO05D007991 9.5e-100 368.2 380 51.1
Solyc07g045550.3 Solanum lycopersicum HOM05D005756 ORTHO05D007991 1.6e-99 367.5 388 49.2
SGA_v2.0_scaffold265G46105 Striga asiatica HOM05D005756 ORTHO05D007991 9.2e-95 351.7 417 48.7
Eucgr.A01028 Eucalyptus grandis HOM05D005756 ORTHO05D007991 4.3e-92 342.8 388 47.2
HPP92_014030 Vanilla planifolia HOM05D005756 ORTHO05D007991 4.7e-91 339.3 434 46.3
CARHR216780 Cardamine hirsuta HOM05D005756 ORTHO05D007991 6.2e-91 339.0 361 50.7
ATR0624G001 Amborella trichopoda HOM05D005756 ORTHO05D007991 4.4e-89 332.8 436 43.1
SEGI_14875 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 5.8e-89 332.4 468 39.3
Sopen05g025200 Solanum pennellii HOM05D005756 ORTHO05D000001 5.8e-89 332.4 416 46.6
Glyma.02G304600 Glycine max HOM05D005756 ORTHO05D007991 8.4e-88 328.6 446 43.0
HPP92_028362 Vanilla planifolia HOM05D005756 ORTHO05D007991 8.4e-88 328.6 434 45.4
Psat2g005040 Pisum sativum HOM05D005756 ORTHO05D007991 2.4e-87 327.0 460 42.8
Medtr5g097060 Medicago truncatula HOM05D005756 ORTHO05D007991 4.2e-87 326.2 462 42.6
LjContig00081g0010185 Lotus japonicus HOM05D005756 ORTHO05D007991 1.2e-86 324.7 449 42.3
SEGI_03134 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.3e-85 320.5 440 39.8
Oeu032118.1 Olea europaea HOM05D005756 ORTHO05D007991 3.9e-85 319.7 442 43.2
TPR.G1270 Trifolium pratense HOM05D005756 ORTHO05D007991 8.7e-85 318.5 451 41.5
arahy.Tifrunner.gnm1.ann1.P22I4F Arachis hypogaea HOM05D005756 ORTHO05D007991 1.1e-84 318.2 427 42.6
Lalb_Chr10g0107581 Lupinus albus HOM05D005756 ORTHO05D007991 1.1e-84 318.2 440 41.8
Cpa.g.sc211.22 Carica papaya HOM05D005756 ORTHO05D007991 2.5e-84 317.0 307 51.5
arahy.Tifrunner.gnm1.ann1.5EZV1I Arachis hypogaea HOM05D005756 ORTHO05D007991 5.6e-84 315.8 427 42.6
SEGI_35519 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 2.4e-82 310.5 448 38.6
SGA_v2.0_scaffold12G05997 Striga asiatica HOM05D005756 ORTHO05D007991 4.0e-82 309.7 397 45.1
unitig_748.g7200 Utricularia gibba HOM05D005756 ORTHO05D007991 6.9e-82 308.9 418 45.5
Phvul.008G284100 Phaseolus vulgaris HOM05D005756 ORTHO05D007991 1.0e-77 295.0 455 40.4
Atru.chr6.3377 Acer truncatum HOM05D005756 ORTHO05D007991 4.3e-76 289.7 324 49.7
TWI18G0016 Tripterygium wilfordii HOM05D005756 ORTHO05D007991 9.6e-76 288.5 424 39.6
Ca_06445_v3 Cicer arietinum L. HOM05D005756 ORTHO05D007991 2.9e-72 276.9 401 40.9
CANSAT64G2382 Cannabis sativa HOM05D005756 ORTHO05D007991 3.2e-71 273.5 285 49.1
VMungo0647G0888 Vigna mungo HOM05D005756 ORTHO05D007991 7.9e-70 268.9 471 37.8
SEGI_34368 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.1e-66 258.5 402 36.3
Glyma.14G009200 Glycine max HOM05D005756 ORTHO05D007991 2.9e-64 250.4 355 42.0
CDE04G3001 Ceratophyllum demersum HOM05D005756 ORTHO05D007991 3.8e-64 250.0 440 35.7
Gohir.D11G156320 Gossypium hirsutum HOM05D005756 ORTHO05D007991 2.7e-62 243.8 441 37.6
SMO364G0494 Selaginella moellendorffii HOM05D005756 ORTHO05D007991 3.9e-53 213.4 402 34.1
Dinv21286 Davidia involucrata HOM05D005756 ORTHO05D007991 1.5e-44 184.9 290 40.7
MBI19_g37437_MAGBIO Magnolia biondii HOM05D005756 ORTHO05D007991 3.1e-26 124.0 130 46.9
SGA_v2.0_scaffold12G05995 Striga asiatica HOM05D002374 ORTHO05D406151 1.8e-21 108.2 157 39.5
SEGI_18115 Sequoiadendron giganteum HOM05D005756 ORTHO05D007991 1.4e-18 98.6 91 53.8
Sc21g0000680 Simmondsia chinensis HOM05D005756 ORTHO05D018916 5.0e-08 63.5 41 73.2
Oeu027645.1 Olea europaea HOM05D005756 ORTHO05D018916 2.5e-07 61.2 49 61.2
Cpa.g.sc211.21 Carica papaya HOM05D005756 ORTHO05D018916 6.1e-06 56.6 40 70.0


User provided reference genes

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