Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-133 479.2 230 100.0
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-96 357.1 178 96.6
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-95 352.4 178 96.1
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.6e-95 352.4 176 96.6
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.7e-95 350.5 178 95.5
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-94 350.1 176 94.9
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-94 350.1 178 94.9
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.8e-94 348.2 176 94.3
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-92 340.9 178 92.1
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-84 315.5 176 84.7
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.0e-77 291.2 175 76.6
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.1e-77 290.8 175 77.1
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-76 290.0 175 77.1
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-76 290.0 175 77.1
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-76 288.9 175 76.0
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.7e-76 287.7 175 76.0
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.2e-75 286.2 175 76.0
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-74 283.9 175 73.7
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.5e-74 283.5 175 74.9
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-52 210.3 167 53.9
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.4e-45 186.4 167 49.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-44 184.1 232 42.2
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.7e-44 183.0 174 47.1
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.6e-44 182.2 230 40.4
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.6e-43 177.9 232 41.4
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.6e-43 177.9 163 48.5
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-42 177.6 161 47.2
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-42 177.6 161 47.8
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-42 177.6 162 54.3
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-42 176.4 163 47.9
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.5e-42 176.4 161 47.8
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.3e-42 175.6 163 47.9
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.6e-42 175.3 161 47.2
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.3e-42 174.9 161 47.2
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.3e-42 174.9 163 47.9
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 9.5e-42 174.5 171 48.5
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.2e-41 174.1 163 48.5
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-41 172.9 161 49.1
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-41 172.9 161 49.1
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-41 172.9 163 52.1
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.7e-41 172.2 163 48.5
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 4.7e-41 172.2 162 48.1
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.2e-41 171.8 163 46.0
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.1e-41 171.4 163 46.6
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.1e-40 171.0 163 50.3
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.4e-40 170.6 167 47.9
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.8e-40 170.2 170 50.6
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-40 169.1 161 48.4
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 6.8e-40 168.3 163 49.7
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 8.9e-40 167.9 161 49.1
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-39 167.5 161 47.8
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-39 167.2 173 46.8
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-39 167.2 163 49.7
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.5e-39 167.2 163 49.7
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-39 166.8 161 47.2
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.0e-39 166.8 165 48.5
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-39 166.4 149 51.7
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 2.6e-39 166.4 160 46.9
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 3.4e-39 166.0 158 50.0
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 3.4e-39 166.0 163 49.7
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-39 166.0 170 50.6
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 5.8e-39 165.2 154 50.0
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 5.8e-39 165.2 162 49.4
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 7.5e-39 164.9 154 48.7
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.5e-39 164.9 157 50.3
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 9.9e-39 164.5 156 50.0
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 1.7e-38 163.7 162 48.8
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.2e-38 163.3 161 46.6
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-38 163.3 161 47.2
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-38 162.9 161 47.8
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-38 162.9 161 47.2
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-38 162.9 161 47.8
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-38 162.9 173 45.1
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 3.7e-38 162.5 173 45.7
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 6.4e-38 161.8 164 48.8
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-37 161.0 173 45.1
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-37 160.2 146 50.0
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-37 159.5 161 47.2
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 4.1e-37 159.1 163 45.4
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 9.2e-37 157.9 165 47.9
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 3.5e-36 156.0 149 47.7
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.8e-36 154.8 162 46.9
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 7.8e-36 154.8 143 52.4
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 2.3e-35 153.3 134 53.0
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 3.9e-35 152.5 175 40.6
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-34 150.2 140 48.6
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-34 149.4 169 43.8
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-34 149.1 138 52.2
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 9.5e-34 147.9 162 41.4
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.6e-33 146.0 148 50.0
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 8.1e-33 144.8 140 47.9
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.4e-32 143.3 161 42.9
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-32 143.3 174 39.7
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 4.0e-32 142.5 160 44.4
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 4.0e-32 142.5 144 45.8
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.2e-32 142.1 163 41.1
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 1.2e-31 141.0 163 41.1
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-31 139.4 142 47.9
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 9.9e-31 137.9 162 43.8
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-30 137.5 161 42.9
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 1.7e-30 137.1 163 44.2
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 3.8e-30 136.0 161 42.2
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-30 135.2 162 39.5
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-30 135.2 162 39.5
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-30 135.2 161 42.9
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 6.4e-30 135.2 162 39.5
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 8.4e-30 134.8 146 41.8
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-29 133.3 161 41.0
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.2e-29 132.9 135 48.9
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 5.4e-29 132.1 159 41.5
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.6e-28 130.6 163 39.9
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 1.7e-27 127.1 157 42.7
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 2.3e-27 126.7 120 46.7
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.7e-27 124.8 127 48.8
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 1.9e-26 123.6 151 39.7
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-26 123.6 152 41.4
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.9e-26 123.6 138 47.1
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.5e-26 123.2 127 48.0
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-25 120.6 113 54.0
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-24 117.9 112 49.1
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-24 116.3 161 34.8
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.9e-24 115.2 132 43.9
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-23 114.0 141 41.8
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.8e-23 112.1 98 52.0
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 8.4e-22 108.2 137 38.7
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 2.4e-21 106.7 103 47.6
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 6.0e-20 102.1 96 50.0
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.3e-19 100.1 88 53.4
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 8.7e-19 98.2 105 43.8
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 1.1e-18 97.8 116 37.1
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 1.1e-18 97.8 116 37.1
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 1.1e-18 97.8 116 37.1
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 1.5e-18 97.4 111 42.3
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.6e-18 95.5 112 47.3
SHI08288 Sapria himalayana HOM05D003057 ORTHO05D003904 1.3e-17 94.4 106 43.4
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.8e-17 93.2 91 47.3
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-16 91.3 162 33.3
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 1.4e-16 90.9 69 63.8
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 3.1e-16 89.7 104 40.4
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 6.9e-16 88.6 162 32.7
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 6.9e-16 88.6 77 53.2
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 2.0e-15 87.0 68 60.3
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.4e-15 86.3 77 55.8
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 5.8e-15 85.5 163 33.7
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.6e-15 85.1 125 36.8
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 3.2e-13 79.7 69 53.6
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.2e-13 79.3 155 32.3
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.2e-13 79.3 104 38.5
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 7.1e-13 78.6 110 38.2
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.9e-11 72.8 75 44.0
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 1.9e-10 70.5 157 28.7
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 5.6e-10 68.9 53 64.2
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 5.3e-08 62.4 73 42.5
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-08 62.4 53 58.5
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.5e-07 60.8 164 28.7
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 3.4e-07 59.7 83 33.7
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.6e-07 58.5 141 29.1
ECA236G3949 Erigeron canadensis HOM05D003057 ORTHO05D003904 4.9e-06 55.8 59 44.1
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 8.4e-06 55.1 41 58.5


User provided reference genes

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