Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g012380 Amaranthus hybridus HOM05D009474 ORTHO05D006373 8.3e-232 806.6 384 100.0
EL10Ac8g19408 Beta vulgaris HOM05D009474 ORTHO05D006373 4.6e-89 332.4 343 51.6
EL10As24g24232 Beta vulgaris HOM05D009474 ORTHO05D006373 6.6e-88 328.6 337 51.3
EL10Ac9g20913 Beta vulgaris HOM05D009474 ORTHO05D006373 8.6e-88 328.2 337 51.0
EL10Ac2g03310 Beta vulgaris HOM05D009474 ORTHO05D006373 1.1e-87 327.8 338 51.2
EL10Ac3g06674 Beta vulgaris HOM05D009474 ORTHO05D006373 2.5e-87 326.6 334 50.9
EL10Ac4g08745 Beta vulgaris HOM05D009474 ORTHO05D006373 2.5e-87 326.6 337 50.7
EL10Ac6g14023 Beta vulgaris HOM05D009474 ORTHO05D006373 9.5e-87 324.7 337 50.4
EL10Ac6g14024 Beta vulgaris HOM05D009474 ORTHO05D006373 9.5e-87 324.7 337 50.4
EL10Ac8g19716 Beta vulgaris HOM05D009474 ORTHO05D006373 9.5e-87 324.7 337 51.0
EL10Ac4g08425 Beta vulgaris HOM05D009474 ORTHO05D006373 2.1e-86 323.6 337 51.0
EL10Ac1g01682 Beta vulgaris HOM05D009474 ORTHO05D006373 2.8e-86 323.2 337 50.1
EL10Ac2g03104 Beta vulgaris HOM05D009474 ORTHO05D006373 6.2e-86 322.0 337 50.1
EL10Ac5g11109 Beta vulgaris HOM05D009474 ORTHO05D006373 6.2e-86 322.0 337 49.9
EL10Ac7g16650 Beta vulgaris HOM05D009474 ORTHO05D006373 8.1e-86 321.6 337 50.1
Ah.11g048270 Amaranthus hybridus HOM05D009474 ORTHO05D006373 2.0e-84 317.0 354 52.0
EL10Ac3g06648 Beta vulgaris HOM05D009474 ORTHO05D006373 8.1e-78 295.0 336 47.3
EL10Ac7g17386 Beta vulgaris HOM05D009474 ORTHO05D006373 4.1e-74 282.7 343 46.1
EL10Ac9g20896 Beta vulgaris HOM05D009474 ORTHO05D006373 7.1e-74 282.0 311 48.2
EL10Ac9g21009 Beta vulgaris HOM05D009474 ORTHO05D006373 1.0e-72 278.1 337 46.3
EL10Ac5g12647 Beta vulgaris HOM05D009474 ORTHO05D006373 1.2e-70 271.2 321 46.7
EL10Ac5g11472 Beta vulgaris HOM05D009474 ORTHO05D006373 7.6e-68 261.9 337 44.2
EL10Ac4g08475 Beta vulgaris HOM05D009474 ORTHO05D006373 2.1e-65 253.8 256 52.0
EL10Ac6g14303 Beta vulgaris HOM05D009474 ORTHO05D006373 6.9e-53 212.2 334 39.8
EL10Ac4g08488 Beta vulgaris HOM05D009474 ORTHO05D006373 2.7e-49 200.3 200 52.5
EL10Ac5g11532 Beta vulgaris HOM05D009474 ORTHO05D006373 4.6e-49 199.5 195 51.8
EL10Ac6g14112 Beta vulgaris HOM05D009474 ORTHO05D006373 1.8e-45 187.6 226 46.0
EL10Ac7g16648 Beta vulgaris HOM05D009474 ORTHO05D006373 8.7e-40 168.7 161 51.6
EL10As12g24000 Beta vulgaris HOM05D009474 ORTHO05D006373 1.4e-37 161.4 160 50.0
EL10Ac8g19880 Beta vulgaris HOM05D009474 ORTHO05D006373 1.5e-28 131.3 320 32.2
AUR62044633 Chenopodium quinoa HOM05D008347 ORTHO05D006373 9.4e-18 95.5 212 31.1
VMungo1299G0001 Vigna mungo HOM05D008347 ORTHO05D006373 3.3e-15 87.0 261 25.7
HanXRQChr05g0135901 Helianthus annuus HOM05D018814 ORTHO05D020816 1.7e-14 84.7 329 25.8
VMungo0251G1913 Vigna mungo HOM05D008347 ORTHO05D006373 5.3e-13 79.7 261 23.8
AUR62036520 Chenopodium quinoa HOM05D008347 ORTHO05D006373 3.5e-12 77.0 221 29.9
Ah.07g199740 Amaranthus hybridus HOM05D016991 ORTHO05D006373 7.7e-12 75.9 138 34.1
AUR62038304 Chenopodium quinoa HOM05D008347 ORTHO05D006373 7.7e-12 75.9 187 29.9
Ah.11g039660 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.7e-11 74.7 252 27.0
AUR62024387 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.2e-11 74.3 221 29.4
AUR62034037 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.9e-11 73.9 213 30.0
Ah.13g068710 Amaranthus hybridus HOM05D009952 ORTHO05D011763 3.8e-11 73.6 281 25.6
AUR62040645 Chenopodium quinoa HOM05D008347 ORTHO05D006373 5.0e-11 73.2 213 29.6
AUR62039428 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.5e-11 72.4 213 29.6
Ah.15g098220 Amaranthus hybridus HOM05D009952 ORTHO05D011763 1.5e-10 71.6 244 25.0
EL10Ac3g06751 Beta vulgaris HOM05D008347 ORTHO05D006373 1.9e-10 71.2 225 28.4
EL10Ac9g22462 Beta vulgaris HOM05D008347 ORTHO05D006373 1.9e-10 71.2 225 28.4
Ah.01g013490 Amaranthus hybridus HOM05D045138 ORTHO05D006373 2.5e-10 70.9 37 89.2
AUR62022722 Chenopodium quinoa HOM05D008347 ORTHO05D006373 2.5e-10 70.9 221 28.5
EL10Ac8g20298 Beta vulgaris HOM05D008347 ORTHO05D006373 7.2e-10 69.3 256 26.6
AL3G34330 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 9.4e-10 68.9 310 23.5
EL10Ac6g13718 Beta vulgaris HOM05D008347 ORTHO05D006373 1.2e-09 68.6 212 28.3
EL10Ac8g20301 Beta vulgaris HOM05D008347 ORTHO05D006373 1.2e-09 68.6 212 28.3
AUR62013905 Chenopodium quinoa HOM05D008347 ORTHO05D006373 1.2e-09 68.6 295 25.8
EL10Ac4g08035 Beta vulgaris HOM05D008347 ORTHO05D006373 1.6e-09 68.2 212 28.3
BcaB04g17676 Brassica carinata HOM05D009356 ORTHO05D010353 1.6e-09 68.2 164 27.4
Ca_06761_v3 Cicer arietinum L. HOM05D008347 ORTHO05D006373 3.6e-09 67.0 254 24.8
Ah.12g065270 Amaranthus hybridus HOM05D009952 ORTHO05D011763 4.7e-09 66.6 237 24.9
AUR62030750 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.0e-09 65.9 160 31.2
BcaC05g27052 Brassica carinata HOM05D009356 ORTHO05D010353 1.8e-08 64.7 329 21.9
AL126U10020 Arabidopsis lyrata HOM05D009356 ORTHO05D006373 6.7e-08 62.8 165 24.8
AL2G19060 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 8.8e-08 62.4 213 25.4
Ah.14g082130 Amaranthus hybridus HOM05D016991 ORTHO05D006373 1.5e-07 61.6 76 39.5
BcaB08g35272 Brassica carinata HOM05D009356 ORTHO05D010353 1.5e-07 61.6 155 26.5
Aa31sc288G20 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.0e-07 61.2 211 24.2
AL9U11180 Arabidopsis lyrata HOM05D003849 ORTHO05D002482 2.0e-07 61.2 213 24.9
Lsat_1_v5_gn_5_8580 Lactuca sativa HOM05D034493 ORTHO05D036444 2.0e-07 61.2 167 29.9
Lsat_1_v5_gn_1_34541 Lactuca sativa HOM05D019772 ORTHO05D000174 3.3e-07 60.5 161 24.8
BcaB08g35697 Brassica carinata HOM05D009356 ORTHO05D010353 4.4e-07 60.1 161 29.2
AUR62040955 Chenopodium quinoa HOM05D008347 ORTHO05D006373 4.4e-07 60.1 132 30.3
Sp6g09590 Schrenkiella parvula HOM05D009356 ORTHO05D010353 9.7e-07 58.9 157 26.8
Ah.07g199330 Amaranthus hybridus HOM05D016991 ORTHO05D006373 1.3e-06 58.5 76 34.2
Aa31LG4G12890 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.2e-06 57.8 302 20.9
Aa31sc154G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.2e-06 57.8 302 20.9
Aa31sc482G30 Aethionema arabicum HOM05D007652 ORTHO05D002482 2.2e-06 57.8 302 20.9
Aa31LG2G17380 Aethionema arabicum HOM05D003849 ORTHO05D002482 8.2e-06 55.8 160 25.0
AUR62028260 Chenopodium quinoa HOM05D008347 ORTHO05D006373 8.2e-06 55.8 120 33.3


User provided reference genes

Program Settings