Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g012340 Amaranthus hybridus HOM05D000691 ORTHO05D000378 4.6e-152 541.2 274 100.0
Ah.01g013530 Amaranthus hybridus HOM05D000691 ORTHO05D000378 5.4e-76 288.5 378 51.1
Ah.09g229600 Amaranthus hybridus HOM05D000691 ORTHO05D000378 7.4e-25 118.6 153 49.0
Ah.12g065350 Amaranthus hybridus HOM05D000691 ORTHO05D000378 4.2e-20 102.8 151 41.1
AUR62031366 Chenopodium quinoa HOM05D002074 ORTHO05D002164 6.1e-19 99.0 276 27.5
Manes.S026816 Manihot esculenta HOM05D000691 ORTHO05D000922 1.5e-17 94.4 181 33.1
AUR62022775 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-17 94.0 388 26.0
Manes.S041516 Manihot esculenta HOM05D033829 ORTHO05D000378 1.9e-17 94.0 222 31.1
Manes.S027416 Manihot esculenta HOM05D000691 ORTHO05D000378 4.3e-17 92.8 181 32.6
EL10Ac8g18762 Beta vulgaris HOM05D000691 ORTHO05D000378 5.7e-17 92.4 337 27.0
EL10Ac6g14162 Beta vulgaris HOM05D000691 ORTHO05D000378 9.7e-17 91.7 337 27.0
EL10Ac7g16302 Beta vulgaris HOM05D000691 ORTHO05D000378 2.8e-16 90.1 349 26.4
Ah.14g080140 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.9e-15 85.5 81 58.0
AUR62031817 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.1e-15 85.1 370 23.8
ClCG08G000140 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.2e-14 84.7 353 26.1
AUR62030164 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.5e-14 84.3 373 24.9
FvH4_6g34501 Fragaria vesca HOM05D000004 ORTHO05D000002 3.4e-14 83.2 358 24.3
CSS0037139 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 5.9e-14 82.4 333 24.9
AUR62029551 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-14 82.0 373 24.1
AUR62033100 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.7e-14 82.0 336 25.0
Hund08734 Selenicereus undatus HOM05D000691 ORTHO05D000378 7.7e-14 82.0 232 28.9
AUR62042054 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.3e-13 81.3 373 24.1
Thhalv10023044m.g Eutrema salsugineum HOM05D000691 ORTHO05D000378 1.3e-13 81.3 355 25.1
Gorai.012G165300 Gossypium raimondii HOM05D000691 ORTHO05D000378 1.7e-13 80.9 248 28.6
HanXRQChr05g0133501 Helianthus annuus HOM05D000691 ORTHO05D000378 1.7e-13 80.9 373 24.7
HanXRQChr00c0452g0574871 Helianthus annuus HOM05D000691 ORTHO05D000378 2.9e-13 80.1 338 24.6
AUR62035881 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.8e-13 79.7 373 24.4
Ah.09g229610 Amaranthus hybridus HOM05D000691 ORTHO05D000378 5.0e-13 79.3 116 43.1
AUR62007502 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.0e-13 79.3 373 24.7
FvH4_c7g00010 Fragaria vesca HOM05D000691 ORTHO05D000378 5.0e-13 79.3 360 26.1
AUR62000692 Chenopodium quinoa HOM05D000691 ORTHO05D000378 6.5e-13 79.0 373 23.9
FvH4_1g23713 Fragaria vesca HOM05D000691 ORTHO05D000378 8.5e-13 78.6 332 26.8
AUR62010643 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-12 78.2 373 24.4
AUR62026199 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-12 78.2 373 23.9
AUR62036876 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.1e-12 78.2 373 23.9
AUR62007290 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-12 77.8 373 24.4
FvH4_3g33536 Fragaria vesca HOM05D000691 ORTHO05D000378 1.4e-12 77.8 360 26.1
AUR62019661 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.9e-12 77.4 373 23.6
AUR62018234 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.5e-12 77.0 373 24.1
AUR62034760 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.5e-12 77.0 373 23.6
FvH4_4g19351 Fragaria vesca HOM05D000691 ORTHO05D000378 2.5e-12 77.0 205 29.3
Manes.06G126602 Manihot esculenta HOM05D000691 ORTHO05D000378 2.5e-12 77.0 195 29.7
AUR62038299 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.2e-12 76.6 373 24.4
EL10Ac3g05722 Beta vulgaris HOM05D000691 ORTHO05D000378 4.2e-12 76.3 381 23.6
AUR62022482 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.2e-12 76.3 169 34.3
Hund17998 Selenicereus undatus HOM05D000691 ORTHO05D000378 5.5e-12 75.9 278 27.0
AUR62032126 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.2e-12 75.5 373 23.3
Ah.14g080130 Amaranthus hybridus HOM05D000691 ORTHO05D000378 9.4e-12 75.1 122 40.2
AUR62033757 Chenopodium quinoa HOM05D000691 ORTHO05D000378 9.4e-12 75.1 371 22.6
AUR62017430 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.2e-11 74.7 373 23.1
AUR62026905 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-11 73.9 373 23.3
AUR62037319 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.1e-11 73.9 345 24.3
AUR62038947 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.7e-11 73.6 373 23.3
AUR62010488 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.6e-11 73.2 247 24.7
FvH4_5g11822 Fragaria vesca HOM05D000691 ORTHO05D000378 7.9e-11 72.0 267 26.2
FvH4_7g28231 Fragaria vesca HOM05D000004 ORTHO05D000378 7.9e-11 72.0 267 26.2
FvH4_4g34281 Fragaria vesca HOM05D000691 ORTHO05D000378 1.0e-10 71.6 259 25.5
AUR62014878 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-10 71.2 264 25.4
AUR62042593 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-10 71.2 373 23.3
AUR62043025 Chenopodium quinoa HOM05D000691 ORTHO05D000378 1.4e-10 71.2 241 24.5
AUR62023603 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.3e-10 70.5 369 22.0
AUR62016224 Chenopodium quinoa HOM05D000691 ORTHO05D000378 3.9e-10 69.7 247 24.7
Hma1.2p1_0370F.1_g137540 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 5.1e-10 69.3 353 24.6
ClCG11G009860 Citrullus lanatus HOM05D009337 ORTHO05D000378 6.7e-10 68.9 190 28.9
Hund19828 Selenicereus undatus HOM05D000691 ORTHO05D000378 6.7e-10 68.9 180 28.3
Oeu049268.1 Olea europaea HOM05D000691 ORTHO05D000378 8.8e-10 68.6 364 23.6
THA.LOC104809135 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 8.8e-10 68.6 327 24.8
Sopen10g013720 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-09 67.8 237 26.2
CAN.G55.5 Capsicum annuum HOM05D000004 ORTHO05D000002 2.0e-09 67.4 395 22.5
CAN.G1226.33 Capsicum annuum HOM05D000004 ORTHO05D000002 2.6e-09 67.0 395 22.5
Oeu027794.2 Olea europaea HOM05D000691 ORTHO05D000378 3.3e-09 66.6 364 23.6
Sopen07g011130 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-09 66.6 311 25.1
Oeu031614.1 Olea europaea HOM05D010458 ORTHO05D000378 4.4e-09 66.2 226 27.4
THA.LOC109116810 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.4e-09 66.2 329 24.6
SHI46406 Sapria himalayana HOM05D000691 ORTHO05D000378 5.7e-09 65.9 259 23.9
Sopen05g028570 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-09 65.9 301 23.3
Sopen07g006330 Solanum pennellii HOM05D000004 ORTHO05D000002 5.7e-09 65.9 378 23.0
AUR62040334 Chenopodium quinoa HOM05D000691 ORTHO05D000378 7.4e-09 65.5 308 25.0
CAN.G1036.12 Capsicum annuum HOM05D000691 ORTHO05D000378 1.3e-08 64.7 237 26.6
CAN.G1250.3 Capsicum annuum HOM05D000004 ORTHO05D000002 1.3e-08 64.7 239 25.1
CAN.G801.8 Capsicum annuum HOM05D000004 ORTHO05D000002 1.3e-08 64.7 399 22.6
FvH4_3g10531 Fragaria vesca HOM05D000691 ORTHO05D000378 1.3e-08 64.7 189 31.2
Oeu016803.1 Olea europaea HOM05D000691 ORTHO05D000378 1.3e-08 64.7 229 27.1
CAN.G1445.1 Capsicum annuum HOM05D000004 ORTHO05D000002 1.7e-08 64.3 399 22.6
CAN.G890.31 Capsicum annuum HOM05D000004 ORTHO05D000002 1.7e-08 64.3 399 22.6
Oeu042671.1 Olea europaea HOM05D000691 ORTHO05D000378 1.7e-08 64.3 199 27.1
Sopen02g008030 Solanum pennellii HOM05D000004 ORTHO05D000002 1.7e-08 64.3 303 25.7
AUR62022985 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.8e-08 63.5 204 29.9
AUR62038782 Chenopodium quinoa HOM05D008390 ORTHO05D000378 2.8e-08 63.5 74 48.6
Oeu027530.1 Olea europaea HOM05D000691 ORTHO05D000378 2.8e-08 63.5 188 26.6
Oeu032737.1 Olea europaea HOM05D000691 ORTHO05D000378 2.8e-08 63.5 267 25.5
Sopen08g011580 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-08 63.5 125 30.4
THA.LOC104807978 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.8e-08 63.5 323 23.5
AUR62029958 Chenopodium quinoa HOM05D008390 ORTHO05D000378 4.8e-08 62.8 210 30.5
Oeu012057.1 Olea europaea HOM05D000691 ORTHO05D000378 4.8e-08 62.8 225 27.1
Sopen01g023070 Solanum pennellii HOM05D000004 ORTHO05D000002 4.8e-08 62.8 313 23.6
Oeu060366.1 Olea europaea HOM05D000691 ORTHO05D000378 6.3e-08 62.4 231 26.8
Sopen02g008020 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-08 62.4 337 22.8
Sopen11g024700 Solanum pennellii HOM05D000004 ORTHO05D000002 6.3e-08 62.4 350 23.7
AUR62042209 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.1e-07 61.6 210 30.0
SHI07582 Sapria himalayana HOM05D000691 ORTHO05D000378 1.1e-07 61.6 161 28.6
AUR62043521 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.4e-07 61.2 163 35.0
CsaV3_1G031080 Cucumis sativus L. HOM05D000691 ORTHO05D000378 1.4e-07 61.2 144 27.8
Sopen03g024470 Solanum pennellii HOM05D000691 ORTHO05D000378 1.4e-07 61.2 251 26.3
Sopen10g014200 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-07 61.2 217 26.7
CAN.G4114.1 Capsicum annuum HOM05D000691 ORTHO05D000378 1.8e-07 60.8 399 23.8
ClCG11G007310 Citrullus lanatus HOM05D000691 ORTHO05D000378 1.8e-07 60.8 286 23.1
HanXRQChr13g0409991 Helianthus annuus HOM05D000691 ORTHO05D000378 1.8e-07 60.8 196 26.0
Oeu048565.1 Olea europaea HOM05D000691 ORTHO05D000378 1.8e-07 60.8 209 25.8
EL10Ac6g14588 Beta vulgaris HOM05D000691 ORTHO05D000378 2.4e-07 60.5 133 27.8
AUR62041609 Chenopodium quinoa HOM05D000691 ORTHO05D000378 2.4e-07 60.5 151 25.8
Sp4g07920 Schrenkiella parvula HOM05D000004 ORTHO05D000002 2.4e-07 60.5 266 26.7
Hma1.2p1_2467F.1_g322660 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 3.1e-07 60.1 195 27.2
Oeu003087.1 Olea europaea HOM05D000691 ORTHO05D000378 3.1e-07 60.1 188 26.1
Sopen02g010150 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-07 60.1 272 23.9
Sopen06g011880 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-07 60.1 346 23.4
Sopen12g017890 Solanum pennellii HOM05D000004 ORTHO05D000002 3.1e-07 60.1 147 27.2
THA.LOC109116182 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.1e-07 59.7 137 29.2
AUR62012637 Chenopodium quinoa HOM05D000691 ORTHO05D000378 5.3e-07 59.3 157 26.8
Oeu021426.1 Olea europaea HOM05D010458 ORTHO05D000378 5.3e-07 59.3 226 26.1
Sopen02g011110 Solanum pennellii HOM05D000004 ORTHO05D000002 5.3e-07 59.3 344 21.2
CsaV3_1G028570 Cucumis sativus L. HOM05D000004 ORTHO05D000002 6.9e-07 58.9 103 34.0
Oeu050628.1 Olea europaea HOM05D000691 ORTHO05D000378 6.9e-07 58.9 188 25.0
Sopen09g013140 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-07 58.9 351 20.5
Oeu007084.1 Olea europaea HOM05D000691 ORTHO05D000378 9.1e-07 58.5 213 24.4
SHI16232 Sapria himalayana HOM05D000691 ORTHO05D000378 9.1e-07 58.5 261 24.5
SHI32154 Sapria himalayana HOM05D000691 ORTHO05D000378 9.1e-07 58.5 229 24.5
AUR62029912 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.2e-06 58.2 75 49.3
FvH4_5g31701 Fragaria vesca HOM05D000691 ORTHO05D000378 1.2e-06 58.2 285 26.0
Oeu003392.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 58.2 188 25.5
Oeu003547.2 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 58.2 138 31.2
Oeu005833.1 Olea europaea HOM05D000691 ORTHO05D000378 1.2e-06 58.2 188 25.0
Oeu018548.1 Olea europaea HOM05D000004 ORTHO05D000378 1.2e-06 58.2 188 25.0
AUR62029957 Chenopodium quinoa HOM05D008390 ORTHO05D000378 1.5e-06 57.8 211 30.3
Manes.13G002614 Manihot esculenta HOM05D000691 ORTHO05D000378 1.5e-06 57.8 249 21.7
QL04p041450 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-06 57.8 190 24.2
QL05p055474 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-06 57.8 190 24.2
QL93p1800_0008 Quercus lobata HOM05D000004 ORTHO05D000002 1.5e-06 57.8 190 24.2
Sp7g04180 Schrenkiella parvula HOM05D000691 ORTHO05D000378 1.5e-06 57.8 178 24.2
Sopen09g025530 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 57.8 170 26.5
Hma1.2p1_1045F.1_g251360 Hydrangea macrophylla HOM05D000691 ORTHO05D000378 2.0e-06 57.4 186 27.4
Oeu027505.1 Olea europaea HOM05D000691 ORTHO05D000378 2.0e-06 57.4 188 24.5
QL05p016549 Quercus lobata HOM05D000004 ORTHO05D000002 2.6e-06 57.0 190 24.2
Sopen11g022600 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-06 57.0 177 26.0
THA.LOC104806071 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 2.6e-06 57.0 184 26.1
Sopen07g013260 Solanum pennellii HOM05D000691 ORTHO05D000378 3.4e-06 56.6 346 22.5
THA.LOC104816062 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 3.4e-06 56.6 187 25.7
Ah.08g209110 Amaranthus hybridus HOM05D000691 ORTHO05D000378 4.5e-06 56.2 147 26.5
CSS0045803 Camellia sinensis var. sinensis HOM05D000691 ORTHO05D000378 5.9e-06 55.8 295 22.4
CiPaw.04G054900 Carya illinoinensis HOM05D000691 ORTHO05D000378 5.9e-06 55.8 306 24.8
AUR62041639 Chenopodium quinoa HOM05D008390 ORTHO05D000378 5.9e-06 55.8 126 38.9
AUR62041640 Chenopodium quinoa HOM05D008390 ORTHO05D000378 5.9e-06 55.8 126 38.9
THA.LOC104799996 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 5.9e-06 55.8 271 23.2
MELO3C022607.2 Cucumis melo HOM05D000691 ORTHO05D000378 7.7e-06 55.5 348 21.6
QL01p005990 Quercus lobata HOM05D000004 ORTHO05D000002 7.7e-06 55.5 235 23.8
Sopen02g008090 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.5 376 21.5
Sopen02g009190 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-06 55.5 376 21.8


User provided reference genes

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