Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g011070 Amaranthus hybridus HOM05D007311 ORTHO05D009011 2.0e-86 322.4 163 100.0
EL10Ac9g22274 Beta vulgaris HOM05D007311 ORTHO05D009011 2.6e-41 172.6 104 80.8
AUR62039076 Chenopodium quinoa HOM05D007311 ORTHO05D009011 1.1e-39 167.2 104 78.8
Hund06317 Selenicereus undatus HOM05D007311 ORTHO05D009011 3.5e-38 162.2 104 75.0
Manes.15G187600 Manihot esculenta HOM05D007311 ORTHO05D009011 2.3e-34 149.4 104 68.3
QL12p002522 Quercus lobata HOM05D007311 ORTHO05D009011 6.8e-34 147.9 103 69.9
CSS0046759 Camellia sinensis var. sinensis HOM05D007311 ORTHO05D009011 1.2e-33 147.1 104 71.2
QL12p002612 Quercus lobata HOM05D007311 ORTHO05D009011 1.2e-33 147.1 102 70.6
SalBow3G0367 Salvia bowleyana HOM05D007311 ORTHO05D009011 2.8e-32 142.5 102 64.7
Lj1g0003439 Lotus japonicus HOM05D007311 ORTHO05D009011 4.8e-32 141.7 104 68.3
Prupe.5G015700 Prunus persica HOM05D007311 ORTHO05D009011 4.8e-32 141.7 104 66.3
arahy.Tifrunner.gnm1.ann1.C28JQA Arachis hypogaea HOM05D007311 ORTHO05D009011 1.8e-31 139.8 104 66.3
arahy.Tifrunner.gnm1.ann1.M0M2WX Arachis hypogaea HOM05D007311 ORTHO05D009011 1.8e-31 139.8 104 66.3
Sp7g18020 Schrenkiella parvula HOM05D007311 ORTHO05D009011 2.4e-31 139.4 104 63.5
Aa31LG6G2000 Aethionema arabicum HOM05D007311 ORTHO05D009011 3.1e-31 139.0 104 64.4
CARHR226190 Cardamine hirsuta HOM05D007311 ORTHO05D009011 3.1e-31 139.0 104 61.5
CiPaw.11G077300 Carya illinoinensis HOM05D007311 ORTHO05D009011 4.1e-31 138.7 104 67.3
Haze_08033 Corylus avellana HOM05D007311 ORTHO05D009011 4.1e-31 138.7 102 67.6
Thhalv10024796m.g Eutrema salsugineum HOM05D000351 ORTHO05D009011 4.1e-31 138.7 104 62.5
Glyma.19G247100 Glycine max HOM05D007311 ORTHO05D009011 5.4e-31 138.3 104 66.3
BcaC09g51414 Brassica carinata HOM05D007311 ORTHO05D009011 7.0e-31 137.9 104 61.5
Glyma.03G249600 Glycine max HOM05D007311 ORTHO05D009011 7.0e-31 137.9 104 64.4
Lalb_Chr15g0076111 Lupinus albus HOM05D007311 ORTHO05D009011 7.0e-31 137.9 104 65.4
Carub.0007s2183 Capsella rubella HOM05D007311 ORTHO05D009011 1.2e-30 137.1 104 60.6
Cc01_g03300 Coffea canephora HOM05D007311 ORTHO05D009011 1.2e-30 137.1 104 65.4
FvH4_5g24490 Fragaria vesca HOM05D007311 ORTHO05D009011 1.2e-30 137.1 104 64.4
Sc18g0005580 Simmondsia chinensis HOM05D007311 ORTHO05D009011 1.2e-30 137.1 92 68.5
BraA01t01079Z Brassica rapa HOM05D007311 ORTHO05D009011 1.6e-30 136.7 104 60.6
MD16G1286900 Malus domestica HOM05D007311 ORTHO05D009011 2.0e-30 136.3 104 65.4
TWI32G0505 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 2.0e-30 136.3 104 65.4
Dinv37446 Davidia involucrata HOM05D007311 ORTHO05D009011 2.7e-30 136.0 100 67.0
A01p11360 Brassica napus HOM05D000351 ORTHO05D009011 3.5e-30 135.6 104 59.6
C01p13360 Brassica napus HOM05D007311 ORTHO05D009011 3.5e-30 135.6 102 61.8
FAN18G0784 Fragaria x ananassa HOM05D007311 ORTHO05D009011 4.5e-30 135.2 104 63.5
Hma1.2p1_0294F.1_g116450 Hydrangea macrophylla HOM05D007311 ORTHO05D009011 5.9e-30 134.8 100 64.0
Gohir.D08G169100 Gossypium hirsutum HOM05D007311 ORTHO05D009011 7.7e-30 134.4 104 62.5
Phvul.006G104200 Phaseolus vulgaris HOM05D007311 ORTHO05D009011 7.7e-30 134.4 104 64.4
PGR031G0344 Punica granatum HOM05D007311 ORTHO05D009011 1.0e-29 134.0 100 65.0
Migut.E01383 Erythranthe guttata HOM05D007311 ORTHO05D009011 1.3e-29 133.7 104 64.4
Eucgr.E01832 Eucalyptus grandis HOM05D007311 ORTHO05D009011 1.3e-29 133.7 104 64.4
Oeu031947.3 Olea europaea HOM05D007311 ORTHO05D009011 1.3e-29 133.7 102 66.7
BcaNung01781 Brassica carinata HOM05D007311 ORTHO05D009011 2.9e-29 132.5 104 58.7
VMungo0540G0453 Vigna mungo HOM05D007311 ORTHO05D009011 2.9e-29 132.5 104 63.5
Medtr7g115450 Medicago truncatula HOM05D007311 ORTHO05D009011 3.8e-29 132.1 104 62.5
Medtr7g115470 Medicago truncatula HOM05D007311 ORTHO05D009011 3.8e-29 132.1 104 62.5
GSVIVG01036913001 Vitis vinifera HOM05D007311 ORTHO05D009011 3.8e-29 132.1 104 63.5
Nn3g18546 Nelumbo nucifera HOM05D007311 ORTHO05D009011 5.0e-29 131.7 104 62.5
SGA_v2.0_scaffold144G35891 Striga asiatica HOM05D007311 ORTHO05D009011 5.0e-29 131.7 103 64.1
Ca_09529_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 6.6e-29 131.3 104 61.5
MBI03_g29283_MAGBIO Magnolia biondii HOM05D006174 ORTHO05D007987 6.6e-29 131.3 104 62.5
TPR.G7011 Trifolium pratense HOM05D007311 ORTHO05D009011 6.6e-29 131.3 104 62.5
AT4G19400 Arabidopsis thaliana HOM05D007311 ORTHO05D009011 8.6e-29 131.0 104 57.7
AT4G19410 Arabidopsis thaliana HOM05D000351 ORTHO05D009011 8.6e-29 131.0 104 57.7
Gorai.004G176300 Gossypium raimondii HOM05D007311 ORTHO05D009011 8.6e-29 131.0 104 62.5
ClCG07G011190 Citrullus lanatus HOM05D000351 ORTHO05D000250 1.1e-28 130.6 104 61.5
DCAR_030948 Daucus carota HOM05D007311 ORTHO05D009011 1.1e-28 130.6 104 63.5
Duzib205G2009 Durio zibethinus HOM05D007311 ORTHO05D009011 1.1e-28 130.6 104 61.5
FAN08G0573 Fragaria x ananassa HOM05D007311 ORTHO05D009011 1.1e-28 130.6 100 63.0
RcHm_v2.0_Chr7g0214961 Rosa chinensis HOM05D007311 ORTHO05D009011 1.1e-28 130.6 104 62.5
Aqoxy102s011 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.5e-28 130.2 104 60.6
Aqoxy2G03516 Aquilegia oxysepala HOM05D007311 ORTHO05D009011 1.5e-28 130.2 104 60.6
COL.COLO4_16729 Corchorus olitorius HOM05D007311 ORTHO05D009011 1.5e-28 130.2 104 61.5
Lsat_1_v5_gn_9_12020 Lactuca sativa HOM05D007311 ORTHO05D009011 1.9e-28 129.8 104 61.5
THA.LOC104811225 Tarenaya hassleriana HOM05D007311 ORTHO05D009011 1.9e-28 129.8 104 58.7
vmacro22112 Vaccinium macrocarpon HOM05D007311 ORTHO05D009011 1.9e-28 129.8 131 54.2
AL7G34740 Arabidopsis lyrata HOM05D007311 ORTHO05D009011 2.5e-28 129.4 104 56.7
MSTRG.1753 Avicennia marina HOM05D007311 ORTHO05D009011 2.5e-28 129.4 104 61.5
AUR62010310 Chenopodium quinoa HOM05D007311 ORTHO05D009011 3.3e-28 129.0 75 81.3
Ciclev10002031m.g Citrus clementina HOM05D007311 ORTHO05D009011 3.3e-28 129.0 104 59.6
Gohir.A08G147900 Gossypium hirsutum HOM05D007311 ORTHO05D009011 3.3e-28 129.0 104 61.5
Cfa012633 Carpinus fangiana HOM05D007311 ORTHO05D009011 5.5e-28 128.3 92 67.4
Psat0s3161g0160 Pisum sativum HOM05D007311 ORTHO05D009011 7.2e-28 127.9 104 61.5
MELO3C016211.2 Cucumis melo HOM05D007311 ORTHO05D009011 9.5e-28 127.5 104 58.7
Sed0011898 Sechium edule HOM05D000351 ORTHO05D000250 1.6e-27 126.7 100 61.0
TAR629G0827 Trochodendron aralioides HOM05D007311 ORTHO05D009011 1.6e-27 126.7 104 60.6
CsaV3_4G007060 Cucumis sativus L. HOM05D007311 ORTHO05D009011 2.8e-27 125.9 104 57.7
CANSAT35G1819 Cannabis sativa HOM05D000351 ORTHO05D000250 1.4e-26 123.6 104 56.7
Potri.003G106700 Populus trichocarpa HOM05D007311 ORTHO05D009011 1.8e-26 123.2 104 61.5
HanXRQChr07g0198461 Helianthus annuus HOM05D007311 ORTHO05D009011 5.2e-26 121.7 104 55.8
Peaxi162Scf00330g01216 Petunia axillaris HOM05D007311 ORTHO05D009011 5.2e-26 121.7 102 57.8
CAN.G22.34 Capsicum annuum HOM05D007311 ORTHO05D009011 6.8e-26 121.3 102 58.8
ECA233G4235 Erigeron canadensis HOM05D007311 ORTHO05D009011 1.2e-25 120.6 104 55.8
unitig_899.g14733 Utricularia gibba HOM05D007311 ORTHO05D009011 1.5e-25 120.2 105 60.0
Thecc.03G322100 Theobroma cacao HOM05D007311 ORTHO05D009011 2.6e-25 119.4 110 58.2
Nitab4.5_0007008g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 3.4e-25 119.0 102 54.9
Nitab4.5_0000623g0080 Nicotiana tabacum HOM05D007311 ORTHO05D009011 4.4e-25 118.6 102 54.9
Solyc08g075070.3 Solanum lycopersicum HOM05D007311 ORTHO05D009011 4.4e-25 118.6 102 55.9
Sabra03G0073500 Salix brachista HOM05D007311 ORTHO05D009011 9.8e-25 117.5 104 57.7
PGSC0003DMG400020814 Solanum tuberosum HOM05D007311 ORTHO05D009011 2.2e-24 116.3 115 52.2
ATR0796G066 Amborella trichopoda HOM05D007311 ORTHO05D009011 2.8e-24 115.9 104 53.8
PSO210G1792 Papaver somniferum HOM05D007311 ORTHO05D009011 2.8e-24 115.9 102 53.9
HPP92_005283 Vanilla planifolia HOM05D007311 ORTHO05D009011 4.9e-24 115.2 100 56.0
PSO238G0022 Papaver somniferum HOM05D007311 ORTHO05D009011 1.4e-23 113.6 102 52.9
CDE11G0786 Ceratophyllum demersum HOM05D007311 ORTHO05D009011 4.1e-23 112.1 104 51.0
Zm00001eb284430 Zea mays HOM05D007311 ORTHO05D009011 1.2e-22 110.5 102 52.9
Sopen08g023700 Solanum pennellii HOM05D007311 ORTHO05D009011 1.6e-22 110.2 94 55.3
SEGI_31752 Sequoiadendron giganteum HOM05D007311 ORTHO05D009011 4.3e-20 102.1 101 46.5
Cpa.g.sc542.2 Carica papaya HOM05D007311 ORTHO05D009011 2.1e-19 99.8 75 61.3
Eucgr.E01869 Eucalyptus grandis HOM05D007311 ORTHO05D009011 8.3e-16 87.8 66 68.2
BcaC02g07636 Brassica carinata HOM05D007311 ORTHO05D009011 2.4e-15 86.3 103 48.5
Os05g0241400 Oryza sativa ssp. japonica HOM05D007311 ORTHO05D009011 3.2e-15 85.9 74 52.7
SalBow1G6002 Salvia bowleyana HOM05D007311 ORTHO05D009011 3.3e-12 75.9 64 57.8
SalBow8G5581 Salvia bowleyana HOM05D007311 ORTHO05D009011 5.6e-12 75.1 65 55.4
Medtr5g045430 Medicago truncatula HOM05D007311 ORTHO05D009011 5.8e-09 65.1 66 51.5
AagrBONN_evm.TU.Sc2ySwM_228.4293 Anthoceros agrestis HOM05D007311 ORTHO05D009011 1.7e-08 63.5 96 30.2
Rhsim07G0141400 Rhododendron simsii HOM05D000351 ORTHO05D000250 4.1e-07 58.9 46 67.4
TWI60G1527 Tripterygium wilfordii HOM05D007311 ORTHO05D009011 5.4e-07 58.5 104 37.5
Ca_12103_v3 Cicer arietinum L. HOM05D007311 ORTHO05D009011 7.1e-07 58.2 37 67.6
SMO139G0010 Selaginella moellendorffii HOM05D007311 ORTHO05D009011 9.2e-07 57.8 106 32.1
Mapoly0040s0015 Marchantia polymorpha HOM05D007311 ORTHO05D009011 4.6e-06 55.5 96 28.1


User provided reference genes

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