Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g010250 Amaranthus hybridus HOM05D000014 ORTHO05D000016 5.9e-55 217.2 105 100.0
Oeu046423.1 Olea europaea HOM05D000014 ORTHO05D000016 7.2e-21 104.0 90 53.3
PGR102G1458 Punica granatum HOM05D000761 ORTHO05D000016 2.7e-20 102.1 87 55.2
CSS0037580 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 6.1e-20 100.9 90 51.1
PGR031G2305 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
PGR042G0019 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
PGR042G2040 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
PGR119G1189 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
PGR119G1452 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
PGR119G1528 Punica granatum HOM05D000014 ORTHO05D000093 8.0e-20 100.5 89 52.8
Oeu038457.1 Olea europaea HOM05D000014 ORTHO05D000016 1.4e-19 99.8 90 51.1
Ah.05g176490 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.8e-19 99.4 90 52.2
Oeu019854.1 Olea europaea HOM05D000014 ORTHO05D000016 4.0e-19 98.2 86 53.5
Ah.09g227080 Amaranthus hybridus HOM05D000014 ORTHO05D000016 5.2e-19 97.8 89 51.7
Oeu014083.1 Olea europaea HOM05D000014 ORTHO05D000016 6.8e-19 97.4 103 46.6
Ah.05g175580 Amaranthus hybridus HOM05D000014 ORTHO05D000016 1.5e-18 96.3 90 51.1
TWI18G1427 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 5.7e-18 94.4 86 51.2
TWI23G1233 Tripterygium wilfordii HOM05D000014 ORTHO05D000016 3.7e-17 91.7 86 50.0
Ca_03019_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.8e-16 89.4 87 48.3
Ca_19963_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 7.0e-16 87.4 87 47.1
Ca_03809_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 1.6e-15 86.3 87 47.1
Ca_06635_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.6e-15 86.3 87 47.1
Ca_09584_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.6e-15 86.3 89 48.3
Ca_23138_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 7.7e-15 84.0 87 47.1
Ca_23063_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-14 83.6 87 46.0
Ca_27944_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.3e-14 83.2 87 44.8
Ca_19616_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.7e-14 82.8 86 46.5
SGA_v2.0_scaffold162G37885 Striga asiatica HOM05D000014 ORTHO05D000016 1.7e-14 82.8 84 44.0
Ca_26849_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.2e-14 82.4 87 44.8
Ca_05333_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.9e-14 82.0 87 46.0
Ca_19712_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 2.9e-14 82.0 91 44.0
Ca_26650_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000093 3.8e-14 81.6 87 44.8
HanXRQChr05g0135921 Helianthus annuus HOM05D000014 ORTHO05D000016 8.5e-14 80.5 90 43.3
TPR.G29200 Trifolium pratense HOM05D000014 ORTHO05D000016 1.1e-13 80.1 91 45.1
Ca_13638_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 5.5e-13 77.8 89 43.8
TPR.G27569 Trifolium pratense HOM05D000014 ORTHO05D000016 5.5e-13 77.8 91 45.1
Manes.02G026950 Manihot esculenta HOM05D000014 ORTHO05D000016 9.5e-13 77.0 89 43.8
Manes.06G029160 Manihot esculenta HOM05D000014 ORTHO05D000016 9.5e-13 77.0 85 44.7
Manes.07G008991 Manihot esculenta HOM05D000014 ORTHO05D000016 9.5e-13 77.0 87 43.7
Ca_03652_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.2e-12 76.6 83 44.6
Ca_03067_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-12 75.9 87 42.5
Ca_19559_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 2.1e-12 75.9 96 40.6
Manes.02G221020 Manihot esculenta HOM05D000014 ORTHO05D000016 3.6e-12 75.1 85 43.5
Manes.05G137052 Manihot esculenta HOM05D000014 ORTHO05D000016 3.6e-12 75.1 85 43.5
Manes.08G086511 Manihot esculenta HOM05D000014 ORTHO05D000016 3.6e-12 75.1 85 43.5
Manes.12G095501 Manihot esculenta HOM05D000014 ORTHO05D000016 3.6e-12 75.1 85 43.5
TPR.G27441 Trifolium pratense HOM05D000014 ORTHO05D000016 3.6e-12 75.1 91 44.0
Manes.04G064966 Manihot esculenta HOM05D000014 ORTHO05D000016 1.4e-11 73.2 81 44.4
VMungo0720G1022 Vigna mungo HOM05D000014 ORTHO05D000016 1.8e-11 72.8 84 40.5
VMungo1127G0663 Vigna mungo HOM05D000014 ORTHO05D000016 1.8e-11 72.8 84 40.5
Ca_23501_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 3.0e-11 72.0 84 41.7
Manes.04G051445 Manihot esculenta HOM05D000014 ORTHO05D000016 3.0e-11 72.0 85 42.4
Manes.08G076205 Manihot esculenta HOM05D000014 ORTHO05D000016 6.8e-11 70.9 85 41.2
Cpa.g.c44326 Carica papaya HOM05D000014 ORTHO05D000016 1.5e-10 69.7 89 42.7
ClCG04G001660 Citrullus lanatus HOM05D000014 ORTHO05D000016 5.7e-10 67.8 81 44.4
PSO170G5595 Papaver somniferum HOM05D000014 ORTHO05D000016 7.5e-10 67.4 84 41.7
PSO339G1122 Papaver somniferum HOM05D000014 ORTHO05D000016 7.5e-10 67.4 86 39.5
TPR.G23123 Trifolium pratense HOM05D000014 ORTHO05D000016 7.5e-10 67.4 76 46.1
PSO832G2008 Papaver somniferum HOM05D000014 ORTHO05D000016 9.8e-10 67.0 86 37.2
Oeu018779.1 Olea europaea HOM05D000014 ORTHO05D000016 1.3e-09 66.6 51 54.9
PSO447G0129 Papaver somniferum HOM05D000014 ORTHO05D000016 1.3e-09 66.6 85 38.8
VMungo0251G1094 Vigna mungo HOM05D000004 ORTHO05D000016 1.3e-09 66.6 84 36.9
PSO017G4594 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-09 66.2 86 38.4
PSO832G2079 Papaver somniferum HOM05D000014 ORTHO05D000016 2.2e-09 65.9 83 38.6
PSO210G1244 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-09 65.5 84 38.1
PSO384G1063 Papaver somniferum HOM05D000014 ORTHO05D000016 2.8e-09 65.5 86 38.4
PSO339G5061 Papaver somniferum HOM05D000014 ORTHO05D000016 3.7e-09 65.1 86 38.4
PSO764G0254 Papaver somniferum HOM05D000014 ORTHO05D000016 3.7e-09 65.1 84 40.5
Manes.17G023144 Manihot esculenta HOM05D000014 ORTHO05D000016 8.3e-09 63.9 82 42.7
PSO017G2550 Papaver somniferum HOM05D000014 ORTHO05D000016 8.3e-09 63.9 84 38.1
PSO674G0086 Papaver somniferum HOM05D000014 ORTHO05D000016 8.3e-09 63.9 84 40.5
PSO170G1623 Papaver somniferum HOM05D000014 ORTHO05D000016 1.1e-08 63.5 86 37.2
AUR62024032 Chenopodium quinoa HOM05D008689 ORTHO05D000016 1.4e-08 63.2 90 34.4
Hund08079 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.4e-08 63.2 82 40.2
FvH4_4g15808 Fragaria vesca HOM05D000014 ORTHO05D000016 1.8e-08 62.8 70 41.4
FvH4_6g00252 Fragaria vesca HOM05D000014 ORTHO05D000016 1.8e-08 62.8 70 41.4
PSO017G7079 Papaver somniferum HOM05D000014 ORTHO05D000016 2.4e-08 62.4 86 37.2
TPR.G21512 Trifolium pratense HOM05D000014 ORTHO05D000016 2.4e-08 62.4 58 51.7
MD15G1306600 Malus domestica HOM05D000014 ORTHO05D000016 3.1e-08 62.0 88 37.5
PSO170G2292 Papaver somniferum HOM05D000014 ORTHO05D000016 3.1e-08 62.0 86 38.4
PSO339G5834 Papaver somniferum HOM05D000014 ORTHO05D000016 3.1e-08 62.0 94 37.2
PSO384G4105 Papaver somniferum HOM05D000014 ORTHO05D000016 3.1e-08 62.0 86 37.2
FvH4_1g29771 Fragaria vesca HOM05D000014 ORTHO05D000016 4.1e-08 61.6 75 38.7
PSO782G2329 Papaver somniferum HOM05D000014 ORTHO05D000016 4.1e-08 61.6 86 37.2
Atru.chr10.776 Acer truncatum HOM05D000014 ORTHO05D000016 5.4e-08 61.2 82 37.8
AUR62029875 Chenopodium quinoa HOM05D000014 ORTHO05D000016 5.4e-08 61.2 80 36.2
CsaV3_1G019570 Cucumis sativus L. HOM05D000014 ORTHO05D000016 5.4e-08 61.2 86 38.4
PSO541G0146 Papaver somniferum HOM05D000014 ORTHO05D000016 5.4e-08 61.2 86 36.0
MD10G1200800 Malus domestica HOM05D000014 ORTHO05D000016 7.0e-08 60.8 88 35.2
PSO210G1966 Papaver somniferum HOM05D000014 ORTHO05D000016 7.0e-08 60.8 85 36.5
PSO063G4722 Papaver somniferum HOM05D000014 ORTHO05D000016 9.2e-08 60.5 87 36.8
PSO170G1505 Papaver somniferum HOM05D000014 ORTHO05D000016 9.2e-08 60.5 86 38.4
PSO675G2717 Papaver somniferum HOM05D000014 ORTHO05D000016 9.2e-08 60.5 87 37.9
PSO782G3239 Papaver somniferum HOM05D000014 ORTHO05D000016 1.6e-07 59.7 85 37.6
TPR.G20931 Trifolium pratense HOM05D000014 ORTHO05D000016 2.0e-07 59.3 71 45.1
FvH4_1g27956 Fragaria vesca HOM05D000014 ORTHO05D000016 2.7e-07 58.9 70 40.0
FvH4_1g27931 Fragaria vesca HOM05D000014 ORTHO05D000016 3.5e-07 58.5 70 38.6
FvH4_1g27951 Fragaria vesca HOM05D000014 ORTHO05D000016 3.5e-07 58.5 70 38.6
FvH4_4g10092 Fragaria vesca HOM05D000014 ORTHO05D000016 3.5e-07 58.5 70 38.6
FvH4_4g17204 Fragaria vesca HOM05D000014 ORTHO05D000016 3.5e-07 58.5 70 38.6
FvH4_1g29494 Fragaria vesca HOM05D000014 ORTHO05D000093 4.5e-07 58.2 71 39.4
FvH4_7g25273 Fragaria vesca HOM05D000014 ORTHO05D000016 4.5e-07 58.2 70 38.6
PSO675G7994 Papaver somniferum HOM05D000014 ORTHO05D000016 4.5e-07 58.2 87 35.6
PSO699G0005 Papaver somniferum HOM05D000014 ORTHO05D000016 4.5e-07 58.2 85 37.6
FvH4_4g05352 Fragaria vesca HOM05D000014 ORTHO05D000016 5.9e-07 57.8 88 35.2
MD02G1206700 Malus domestica HOM05D000014 ORTHO05D000016 5.9e-07 57.8 90 33.3
PSO339G0240 Papaver somniferum HOM05D000014 ORTHO05D000016 5.9e-07 57.8 86 33.7
Ca_27479_v3 Cicer arietinum L. HOM05D000014 ORTHO05D000016 1.0e-06 57.0 87 34.5
AUR62044770 Chenopodium quinoa HOM05D008689 ORTHO05D000016 1.3e-06 56.6 85 34.1
CANSAT80G1312 Cannabis sativa HOM05D000014 ORTHO05D000016 1.7e-06 56.2 91 33.0
PSO063G6299 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-06 56.2 86 34.9
PSO832G2045 Papaver somniferum HOM05D000014 ORTHO05D000016 1.7e-06 56.2 86 33.7
Atru.chr12.2468 Acer truncatum HOM05D000014 ORTHO05D000016 2.3e-06 55.8 97 32.0
CANSAT78G2394 Cannabis sativa HOM05D000014 ORTHO05D000016 2.3e-06 55.8 91 33.0
CSS0008445 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 2.9e-06 55.5 88 33.0
PSO339G3833 Papaver somniferum HOM05D000014 ORTHO05D000016 2.9e-06 55.5 85 35.3
CSS0003442 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 3.8e-06 55.1 88 34.1
FvH4_3g19212 Fragaria vesca HOM05D000014 ORTHO05D000016 3.8e-06 55.1 87 33.3
arahy.Tifrunner.gnm1.ann1.9BJ40N Arachis hypogaea HOM05D015831 ORTHO05D000016 5.0e-06 54.7 88 34.1
PSO339G5796 Papaver somniferum HOM05D000014 ORTHO05D000016 5.0e-06 54.7 86 33.7
CSS0025281 Camellia sinensis var. sinensis HOM05D000014 ORTHO05D000093 6.6e-06 54.3 88 34.1
Oeu021836.2 Olea europaea HOM05D000014 ORTHO05D000016 6.6e-06 54.3 68 36.8
Cpa.g.sc38.92 Carica papaya HOM05D000014 ORTHO05D000016 8.6e-06 53.9 76 38.2
FvH4_1g28083 Fragaria vesca HOM05D000014 ORTHO05D000016 8.6e-06 53.9 86 33.7
PSO210G7727 Papaver somniferum HOM05D000014 ORTHO05D000016 8.6e-06 53.9 65 40.0


User provided reference genes

Program Settings