Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.01g001690 Amaranthus hybridus HOM05D006241 ORTHO05D007842 2.6e-45 184.9 84 100.0
AUR62015196 Chenopodium quinoa HOM05D006241 ORTHO05D007842 3.0e-17 91.7 84 58.3
Ah.01g013010 Amaranthus hybridus HOM05D006241 ORTHO05D007842 3.9e-17 91.3 78 59.0
AUR62017658 Chenopodium quinoa HOM05D006241 ORTHO05D007842 2.0e-13 79.0 36 86.1
Hund08526 Selenicereus undatus HOM05D006241 ORTHO05D007842 1.7e-12 75.9 36 83.3
Psat7g177480 Pisum sativum HOM05D006241 ORTHO05D007842 4.1e-11 71.2 36 77.8
Cc10_g00830 Coffea canephora HOM05D006241 ORTHO05D007842 5.4e-11 70.9 36 80.6
FAN20G1861 Fragaria x ananassa HOM05D006241 ORTHO05D007842 9.2e-11 70.1 73 52.1
Nitab4.5_0000588g0230 Nicotiana tabacum HOM05D006241 ORTHO05D007842 9.2e-11 70.1 36 80.6
QL02p013848 Quercus lobata HOM05D006241 ORTHO05D007842 9.2e-11 70.1 36 80.6
Actinidia17033 Actinidia chinensis HOM05D006241 ORTHO05D007842 1.2e-10 69.7 38 76.3
Migut.N03197 Erythranthe guttata HOM05D006241 ORTHO05D007842 1.2e-10 69.7 36 77.8
Glyma.11G099500 Glycine max HOM05D006241 ORTHO05D007842 1.2e-10 69.7 36 75.0
Lj3g0010530 Lotus japonicus HOM05D006241 ORTHO05D007842 1.2e-10 69.7 36 77.8
RcHm_v2.0_Chr6g0304101 Rosa chinensis HOM05D006241 ORTHO05D007842 1.6e-10 69.3 36 80.6
THA.LOC109116669 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 1.6e-10 69.3 36 86.1
TWI12G0416 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.1e-10 68.9 36 75.0
TWI56G0163 Tripterygium wilfordii HOM05D006241 ORTHO05D007842 2.1e-10 68.9 36 75.0
Prupe.1G355800 Prunus persica HOM05D006241 ORTHO05D007842 2.7e-10 68.6 36 75.0
Cfa014051 Carpinus fangiana HOM05D006241 ORTHO05D007842 3.5e-10 68.2 36 75.0
FvH4_2g37630 Fragaria vesca HOM05D006241 ORTHO05D007842 3.5e-10 68.2 36 75.0
Nn6g31777 Nelumbo nucifera HOM05D006241 ORTHO05D007842 3.5e-10 68.2 38 73.7
PSO357G0248 Papaver somniferum HOM05D006241 ORTHO05D007842 3.5e-10 68.2 36 75.0
THA.LOC104811457 Tarenaya hassleriana HOM05D006241 ORTHO05D007842 3.5e-10 68.2 36 83.3
Dinv39579 Davidia involucrata HOM05D006241 ORTHO05D007842 4.6e-10 67.8 38 73.7
PSO170G5266 Papaver somniferum HOM05D006241 ORTHO05D007842 4.6e-10 67.8 36 75.0
CAN.G311.105 Capsicum annuum HOM05D006241 ORTHO05D007842 6.0e-10 67.4 36 77.8
FAN15G0812 Fragaria x ananassa HOM05D006241 ORTHO05D007842 6.0e-10 67.4 36 75.0
Glyma.12G025500 Glycine max HOM05D006241 ORTHO05D007842 6.0e-10 67.4 36 75.0
TAR376G1175 Trochodendron aralioides HOM05D006241 ORTHO05D007842 6.0e-10 67.4 36 75.0
Actinidia15484 Actinidia chinensis HOM05D006241 ORTHO05D007842 7.8e-10 67.0 38 71.1
arahy.Tifrunner.gnm1.ann1.1F1YZI Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-10 67.0 36 75.0
arahy.Tifrunner.gnm1.ann1.1NSU2H Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-10 67.0 36 75.0
arahy.Tifrunner.gnm1.ann1.4R2MNP Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-10 67.0 36 75.0
arahy.Tifrunner.gnm1.ann1.L8CN1K Arachis hypogaea HOM05D006241 ORTHO05D007842 7.8e-10 67.0 36 75.0
PGR031G1817 Punica granatum HOM05D006241 ORTHO05D007842 7.8e-10 67.0 37 73.0
CSS0008517 Camellia sinensis var. sinensis HOM05D006241 ORTHO05D007842 1.0e-09 66.6 38 71.1
CiPaw.08G071900 Carya illinoinensis HOM05D006241 ORTHO05D007842 1.0e-09 66.6 36 72.2
Lalb_Chr17g0337811 Lupinus albus HOM05D006241 ORTHO05D007842 1.0e-09 66.6 37 73.0
Atru.chr13.161 Acer truncatum HOM05D006241 ORTHO05D007842 1.3e-09 66.2 36 69.4
CANSAT54G0965 Cannabis sativa HOM05D006241 ORTHO05D007842 1.3e-09 66.2 36 72.2
DCAR_016755 Daucus carota HOM05D006241 ORTHO05D007842 1.3e-09 66.2 37 81.1
MD08G1003800 Malus domestica HOM05D006241 ORTHO05D007842 1.3e-09 66.2 36 72.2
MD15G1003400 Malus domestica HOM05D006241 ORTHO05D007842 1.3e-09 66.2 36 72.2
VMungo1127G1075 Vigna mungo HOM05D006241 ORTHO05D007842 1.3e-09 66.2 34 76.5
Medtr4g075160 Medicago truncatula HOM05D006241 ORTHO05D007842 1.7e-09 65.9 71 49.3
SGA_v2.0_scaffold25G11191 Striga asiatica HOM05D006241 ORTHO05D007842 1.7e-09 65.9 36 72.2
ATR0661G361 Amborella trichopoda HOM05D006241 ORTHO05D007842 2.3e-09 65.5 36 72.2
Aqoxy6G01804 Aquilegia oxysepala HOM05D006241 ORTHO05D007842 2.3e-09 65.5 39 76.9
CARHR069760 Cardamine hirsuta HOM05D006241 ORTHO05D007842 3.0e-09 65.1 36 72.2
MELO3C017010.2 Cucumis melo HOM05D006241 ORTHO05D007842 3.0e-09 65.1 34 79.4
HanXRQChr17g0555751 Helianthus annuus HOM05D006241 ORTHO05D007842 3.0e-09 65.1 36 72.2
Manes.18G006720 Manihot esculenta HOM05D006241 ORTHO05D007842 3.0e-09 65.1 36 72.2
Phvul.011G027800 Phaseolus vulgaris HOM05D006241 ORTHO05D007842 3.0e-09 65.1 34 76.5
Potri.002G012700 Populus trichocarpa HOM05D006241 ORTHO05D007842 3.0e-09 65.1 36 72.2
CiPaw.07G140100 Carya illinoinensis HOM05D006241 ORTHO05D007842 3.9e-09 64.7 36 69.4
DCAR_013903 Daucus carota HOM05D006241 ORTHO05D007842 3.9e-09 64.7 34 76.5
Gohir.A01G107600 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.9e-09 64.7 36 72.2
HanXRQChr17g0554651 Helianthus annuus HOM05D006241 ORTHO05D007842 3.9e-09 64.7 36 69.4
Manes.05G136000 Manihot esculenta HOM05D006241 ORTHO05D007842 3.9e-09 64.7 36 72.2
Ca_19011_v3 Cicer arietinum L. HOM05D006241 ORTHO05D007842 5.1e-09 64.3 35 77.1
Potri.005G248600 Populus trichocarpa HOM05D006241 ORTHO05D007842 5.1e-09 64.3 36 72.2
SalBow6G4847 Salvia bowleyana HOM05D006241 ORTHO05D007842 5.1e-09 64.3 71 50.7
PGSC0003DMG400009898 Solanum tuberosum HOM05D006241 ORTHO05D007842 5.1e-09 64.3 36 72.2
Dinv31923 Davidia involucrata HOM05D006241 ORTHO05D007842 6.6e-09 63.9 36 72.2
Sabra05G0192000 Salix brachista HOM05D006241 ORTHO05D007842 6.6e-09 63.9 36 69.4
unitig_746.g26818 Utricularia gibba HOM05D003604 ORTHO05D000209 6.6e-09 63.9 50 60.0
Gohir.D01G094000 Gossypium hirsutum HOM05D006241 ORTHO05D007842 8.7e-09 63.5 36 72.2
Gorai.002G119300 Gossypium raimondii HOM05D006241 ORTHO05D007842 8.7e-09 63.5 36 72.2
Nn5g30908 Nelumbo nucifera HOM05D006241 ORTHO05D007842 8.7e-09 63.5 36 72.2
ClCG05G015200 Citrullus lanatus HOM05D006241 ORTHO05D007842 1.1e-08 63.2 33 78.8
CsaV3_4G037120 Cucumis sativus L. HOM05D006241 ORTHO05D007842 1.1e-08 63.2 34 76.5
Duzib116G0823 Durio zibethinus HOM05D006241 ORTHO05D007842 1.1e-08 63.2 36 72.2
AL2G36270 Arabidopsis lyrata HOM05D006241 ORTHO05D007842 1.5e-08 62.8 34 73.5
AT1G76200 Arabidopsis thaliana HOM05D006241 ORTHO05D007842 1.5e-08 62.8 34 73.5
Eucgr.F01733 Eucalyptus grandis HOM05D006241 ORTHO05D007842 1.5e-08 62.8 36 72.2
Thecc.08G056300 Theobroma cacao HOM05D006241 ORTHO05D007842 1.5e-08 62.8 36 69.4
Duzib041G0756 Durio zibethinus HOM05D006241 ORTHO05D007842 1.9e-08 62.4 36 69.4
TAR381G1678 Trochodendron aralioides HOM05D006241 ORTHO05D007842 1.9e-08 62.4 38 68.4
COL.COLO4_21601 Corchorus olitorius HOM05D006241 ORTHO05D007842 2.5e-08 62.0 34 73.5
MBI19_g35281_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 2.5e-08 62.0 29 79.3
MBI19_g43741_MAGBIO Magnolia biondii HOM05D006241 ORTHO05D007842 2.5e-08 62.0 73 45.2
HPP92_021050 Vanilla planifolia HOM05D006241 ORTHO05D007842 2.5e-08 62.0 71 47.9
Gohir.A05G180800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 3.3e-08 61.6 36 69.4
Gorai.009G189100 Gossypium raimondii HOM05D006241 ORTHO05D007842 3.3e-08 61.6 36 69.4
Aa31LG4G6300 Aethionema arabicum HOM05D006241 ORTHO05D007842 4.3e-08 61.2 36 69.4
Thhalv10019410m.g Eutrema salsugineum HOM05D006241 ORTHO05D007842 4.3e-08 61.2 36 69.4
Duzib093G0667 Durio zibethinus HOM05D006241 ORTHO05D007842 5.6e-08 60.8 36 69.4
Sed0002381 Sechium edule HOM05D006241 ORTHO05D007842 5.6e-08 60.8 33 75.8
Cpa.g.sc222.6 Carica papaya HOM05D006241 ORTHO05D007842 9.6e-08 60.1 34 73.5
Lalb_Chr10g0094931 Lupinus albus HOM05D006241 ORTHO05D007842 9.6e-08 60.1 39 64.1
CDE05G0950 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.2e-07 59.7 36 66.7
CDE05G1511 Ceratophyllum demersum HOM05D006241 ORTHO05D007842 1.2e-07 59.7 36 66.7
Gohir.D05G183800 Gossypium hirsutum HOM05D006241 ORTHO05D007842 1.2e-07 59.7 36 66.7
Carub.0002s2310 Capsella rubella HOM05D006241 ORTHO05D007842 1.6e-07 59.3 31 71.0
Sp5g31350 Schrenkiella parvula HOM05D006241 ORTHO05D007842 1.6e-07 59.3 31 71.0
Lsat_1_v5_gn_8_133721 Lactuca sativa HOM05D006241 ORTHO05D007842 2.8e-07 58.5 36 69.4
Sabra07G0051400 Salix brachista HOM05D006241 ORTHO05D349851 3.6e-07 58.2 36 63.9
Ciclev10010113m.g Citrus clementina HOM05D006241 ORTHO05D007842 4.7e-07 57.8 35 65.7
BcaB02g07055 Brassica carinata HOM05D006241 ORTHO05D007842 6.2e-07 57.4 36 63.9
AagrBONN_evm.TU.Sc2ySwM_117.850 Anthoceros agrestis HOM05D006241 ORTHO05D007842 1.1e-06 56.6 38 57.9
BcaB05g24973 Brassica carinata HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
BcaC08g47115 Brassica carinata HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
BcaC08g47119 Brassica carinata HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
BcaC08g47281 Brassica carinata HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
A07p41770 Brassica napus HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
C06p50150 Brassica napus HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
BolC6t40055H Brassica oleracea HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
BraA07t31707Z Brassica rapa HOM05D006241 ORTHO05D007842 1.8e-06 55.8 31 64.5
Os05g0122900 Oryza sativa ssp. japonica HOM05D006241 ORTHO05D007842 3.1e-06 55.1 34 70.6
Zm00001eb294120 Zea mays HOM05D006241 ORTHO05D007842 4.0e-06 54.7 36 63.9
Zm00001eb356460 Zea mays HOM05D006241 ORTHO05D007842 4.0e-06 54.7 36 63.9
A07p28590 Brassica napus HOM05D006241 ORTHO05D007842 5.2e-06 54.3 36 61.1
BraA07t30500Z Brassica rapa HOM05D006241 ORTHO05D007842 5.2e-06 54.3 36 61.1


User provided reference genes

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