Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia40228 Actinidia chinensis HOM05D000151 ORTHO05D000074 6.5e-105 384.0 188 100.0
Actinidia20872 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.7e-36 155.6 87 78.2
Actinidia25882 Actinidia chinensis HOM05D000151 ORTHO05D000074 3.1e-22 109.4 89 55.1
Rhsim03G0188400 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.0e-22 107.8 84 56.0
Actinidia20871 Actinidia chinensis HOM05D002301 ORTHO05D002316 2.7e-18 96.3 48 79.2
Cfa018639 Carpinus fangiana HOM05D000151 ORTHO05D000074 3.2e-11 72.8 87 47.1
Rhsim03G0187300 Rhododendron simsii HOM05D002159 ORTHO05D005625 3.2e-11 72.8 85 44.7
TAR636G0046 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.4e-11 72.0 73 46.6
TAR636G1120 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.7e-10 69.7 73 46.6
TAR636G1620 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.0e-10 68.6 71 45.1
TAR636G2284 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.0e-10 68.6 71 45.1
TAR636G2694 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.0e-10 68.6 71 45.1
TAR636G3198 Trochodendron aralioides HOM05D000151 ORTHO05D000074 6.0e-10 68.6 71 45.1
TAR636G2770 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.0e-09 67.8 92 38.0
TWI14G1327 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 1.3e-09 67.4 87 35.6
TAR636G2641 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.3e-09 67.4 75 46.7
Gohir.A09G216560 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.8e-09 67.0 79 45.6
MD13G1047500 Malus domestica HOM05D000151 ORTHO05D000074 1.8e-09 67.0 88 40.9
Aqoxy7G00553 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.9e-09 65.9 74 40.5
TAR376G0686 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-09 65.9 86 37.2
TAR636G2287 Trochodendron aralioides HOM05D000151 ORTHO05D000074 3.9e-09 65.9 70 44.3
Actinidia09337 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.1e-09 65.5 68 44.1
Prupe.2G253900 Prunus persica HOM05D000151 ORTHO05D000074 5.1e-09 65.5 91 41.8
TAR636G0534 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.1e-09 65.5 75 44.0
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.7e-09 65.1 71 39.4
QL04p009939 Quercus lobata HOM05D000151 ORTHO05D000074 6.7e-09 65.1 97 33.0
Aqoxy3G01208 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.7e-09 64.7 81 42.0
MD01G1199400 Malus domestica HOM05D000151 ORTHO05D000074 1.1e-08 64.3 67 41.8
MD10G1043600 Malus domestica HOM05D000151 ORTHO05D000074 1.1e-08 64.3 73 46.6
Prupe.1G208900 Prunus persica HOM05D000151 ORTHO05D000074 1.1e-08 64.3 69 46.4
Dinv28404 Davidia involucrata HOM05D000151 ORTHO05D000074 1.5e-08 63.9 71 42.3
TAR362G0800 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.5e-08 63.9 74 43.2
Aqoxy5G01389 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-08 63.5 78 41.0
Lj2C483T3 Lonicera japonica HOM05D000151 ORTHO05D000074 1.9e-08 63.5 85 38.8
Prupe.5G168600 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-08 63.2 82 43.9
Prupe.5G168800 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-08 63.2 102 39.2
Prupe.5G169100 Prunus persica HOM05D000151 ORTHO05D000074 2.5e-08 63.2 102 39.2
Prupe.1G273900 Prunus persica HOM05D000151 ORTHO05D000074 3.3e-08 62.8 70 45.7
Hma1.2p1_2038F.1_g312030 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.3e-08 62.4 69 43.5
TAR636G0604 Trochodendron aralioides HOM05D000151 ORTHO05D000074 5.6e-08 62.0 72 44.4
TWI23G0668 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.4e-08 61.6 86 38.4
Lj2P486T20 Lonicera japonica HOM05D000151 ORTHO05D000074 9.6e-08 61.2 64 46.9
MD07G1264900 Malus domestica HOM05D000151 ORTHO05D000074 9.6e-08 61.2 76 35.5
Thecc.04G266200 Theobroma cacao HOM05D000151 ORTHO05D000074 9.6e-08 61.2 76 40.8
TAR636G1766 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.6e-08 61.2 72 43.1
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.6e-07 60.5 71 38.0
Aqoxy7G01873 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.6e-07 60.5 82 34.1
Gohir.A09G216520 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.6e-07 60.5 74 43.2
QL04p010068 Quercus lobata HOM05D002214 ORTHO05D007367 1.6e-07 60.5 75 40.0
QL04p012551 Quercus lobata HOM05D000151 ORTHO05D000074 1.6e-07 60.5 82 35.4
Cfa000099 Carpinus fangiana HOM05D000151 ORTHO05D000074 2.1e-07 60.1 80 40.0
Nn6g31857 Nelumbo nucifera HOM05D000151 ORTHO05D000074 2.1e-07 60.1 67 44.8
Prupe.3G068500 Prunus persica HOM05D000151 ORTHO05D000074 2.1e-07 60.1 89 41.6
QL04p009931 Quercus lobata HOM05D000151 ORTHO05D000074 2.1e-07 60.1 80 35.0
Rhsim02G0249600 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-07 60.1 86 36.0
Rhsim08G0250200 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.1e-07 60.1 72 44.4
TWI23G0161 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.1e-07 60.1 70 38.6
CANSAT11G0748 Cannabis sativa HOM05D000151 ORTHO05D000074 2.8e-07 59.7 76 42.1
QL04p010169 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-07 59.7 75 38.7
QL04p013569 Quercus lobata HOM05D000151 ORTHO05D000074 2.8e-07 59.7 80 35.0
FvH4_1g17880 Fragaria vesca HOM05D000151 ORTHO05D000074 3.7e-07 59.3 82 41.5
Nn1g04501 Nelumbo nucifera HOM05D000151 ORTHO05D000074 3.7e-07 59.3 69 40.6
Prupe.1G009400 Prunus persica HOM05D000151 ORTHO05D000074 3.7e-07 59.3 91 37.4
Dinv12042 Davidia involucrata HOM05D000151 ORTHO05D000074 4.8e-07 58.9 80 40.0
Dinv28382 Davidia involucrata HOM05D000151 ORTHO05D000074 4.8e-07 58.9 46 52.2
FvH4_7g29280 Fragaria vesca HOM05D000151 ORTHO05D000074 6.2e-07 58.5 109 32.1
FAN06G3143 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.2e-07 58.5 109 32.1
FAN06G3752 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.2e-07 58.5 109 32.1
FAN19G1598 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.2e-07 58.5 67 43.3
QL06p052453 Quercus lobata HOM05D000151 ORTHO05D000074 6.2e-07 58.5 76 38.2
Atru.chr9.2350 Acer truncatum HOM05D000151 ORTHO05D000074 8.1e-07 58.2 68 41.2
Aqoxy7G03844 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 8.1e-07 58.2 93 36.6
Haze_17430 Corylus avellana HOM05D000151 ORTHO05D000074 8.1e-07 58.2 70 45.7
FAN03G1312 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.1e-07 58.2 109 32.1
FAN10G0230 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.1e-07 58.2 109 32.1
FAN17G0578 Fragaria x ananassa HOM05D000151 ORTHO05D000074 8.1e-07 58.2 85 37.6
Manes.07G048800 Manihot esculenta HOM05D000151 ORTHO05D000074 8.1e-07 58.2 76 42.1
PSO170G4594 Papaver somniferum HOM05D000151 ORTHO05D000074 8.1e-07 58.2 123 30.9
Aqoxy7G00582 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.1e-06 57.8 71 38.0
CAN.G1804.2 Capsicum annuum HOM05D000151 ORTHO05D000074 1.1e-06 57.8 84 41.7
CiPaw.01G271700 Carya illinoinensis HOM05D000151 ORTHO05D000074 1.1e-06 57.8 93 35.5
QL04p012604 Quercus lobata HOM05D000151 ORTHO05D000074 1.1e-06 57.8 80 33.8
TAR636G2826 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.1e-06 57.8 70 41.4
Aqoxy2G00256 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.4e-06 57.4 83 33.7
FAN19G0534 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.4e-06 57.4 82 40.2
FAN28G0096 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.4e-06 57.4 82 40.2
Manes.07G048850 Manihot esculenta HOM05D000151 ORTHO05D000074 1.4e-06 57.4 76 42.1
QL04p009594 Quercus lobata HOM05D000151 ORTHO05D000074 1.4e-06 57.4 81 32.1
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.8e-06 57.0 72 40.3
Prupe.6G184200 Prunus persica HOM05D000151 ORTHO05D000074 1.8e-06 57.0 76 36.8
QL04p009567 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 80 32.5
QL04p012573 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 73 37.0
QL04p013607 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 73 37.0
QL06p052352 Quercus lobata HOM05D000151 ORTHO05D000074 1.8e-06 57.0 57 47.4
Sed0010460 Sechium edule HOM05D000151 ORTHO05D000074 1.8e-06 57.0 71 38.0
Aqoxy3G02149 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 56.6 90 37.8
Aqoxy3G03918 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.4e-06 56.6 90 37.8
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 2.4e-06 56.6 156 28.8
FvH4_4g29110 Fragaria vesca HOM05D000151 ORTHO05D000074 2.4e-06 56.6 85 37.6
Manes.18G008400 Manihot esculenta HOM05D000151 ORTHO05D000074 2.4e-06 56.6 69 40.6
Rhsim02G0229700 Rhododendron simsii HOM05D000151 ORTHO05D000074 2.4e-06 56.6 66 39.4
TWI23G0906 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 2.4e-06 56.6 66 42.4
Aqoxy7G01870 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 3.1e-06 56.2 72 34.7
Dinv28402 Davidia involucrata HOM05D000151 ORTHO05D000074 3.1e-06 56.2 50 44.0
FAN12G3793 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-06 56.2 85 37.6
FAN19G2647 Fragaria x ananassa HOM05D000151 ORTHO05D000074 3.1e-06 56.2 123 36.6
Lj2C484T9 Lonicera japonica HOM05D000151 ORTHO05D000074 3.1e-06 56.2 84 36.9
TWI23G1102 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 3.1e-06 56.2 80 33.8
Cc06_g19480 Coffea canephora HOM05D000151 ORTHO05D000074 4.0e-06 55.8 62 40.3
Haze_25246 Corylus avellana HOM05D000151 ORTHO05D000074 4.0e-06 55.8 72 43.1
Hma1.2p1_0792F.1_g218540 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 4.0e-06 55.8 88 37.5
Rhsim03G0175900 Rhododendron simsii HOM05D002642 ORTHO05D002834 4.0e-06 55.8 87 37.9
RcHm_v2.0_Chr2g0092531 Rosa chinensis HOM05D000151 ORTHO05D000074 4.0e-06 55.8 108 33.3
PGSC0003DMG400012149 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.0e-06 55.8 86 41.9
TWI23G0794 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 4.0e-06 55.8 66 39.4
Aqoxy2G01395 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.3e-06 55.5 70 37.1
Aqoxy7G03315 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.3e-06 55.5 74 39.2
Aqoxy7G03892 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 5.3e-06 55.5 72 36.1
CANSAT21G2560 Cannabis sativa HOM05D000151 ORTHO05D000074 5.3e-06 55.5 64 42.2
Cfa000098 Carpinus fangiana HOM05D000151 ORTHO05D022277 5.3e-06 55.5 73 38.4
Haze_06926 Corylus avellana HOM05D000151 ORTHO05D000074 5.3e-06 55.5 73 38.4
CsaV3_3G005870 Cucumis sativus L. HOM05D000151 ORTHO05D034718 5.3e-06 55.5 70 40.0
Dinv28380 Davidia involucrata HOM05D006127 ORTHO05D007465 5.3e-06 55.5 46 50.0
Dinv35548 Davidia involucrata HOM05D000151 ORTHO05D000074 5.3e-06 55.5 75 40.0
Hma1.2p1_0367F.1_g137170 Hydrangea macrophylla HOM05D000151 ORTHO05D000074 5.3e-06 55.5 79 36.7
TWI23G1227 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.3e-06 55.5 71 36.6
Atru.chr9.2200 Acer truncatum HOM05D000151 ORTHO05D000074 6.9e-06 55.1 86 33.7
Aqoxy3G03919 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 6.9e-06 55.1 65 43.1
Haze_06933 Corylus avellana HOM05D000151 ORTHO05D000074 6.9e-06 55.1 73 38.4
FAN03G0557 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.9e-06 55.1 75 38.7
FAN15G1730 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.9e-06 55.1 70 41.4
FAN15G2038 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.9e-06 55.1 70 41.4
FAN22G1937 Fragaria x ananassa HOM05D000151 ORTHO05D000074 6.9e-06 55.1 85 36.5
Manes.05G141800 Manihot esculenta HOM05D000151 ORTHO05D000074 6.9e-06 55.1 76 34.2
QL11p010874 Quercus lobata HOM05D000151 ORTHO05D000074 6.9e-06 55.1 79 36.7
Aqoxy2G01390 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.0e-06 54.7 69 37.7
Aqoxy3G02113 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.0e-06 54.7 73 35.6
Aqoxy7G00538 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 9.0e-06 54.7 37 56.8
Haze_17426 Corylus avellana HOM05D000566 ORTHO05D000686 9.0e-06 54.7 79 38.0
FvH4_1g04110 Fragaria vesca HOM05D000151 ORTHO05D000074 9.0e-06 54.7 79 39.2
FvH4_2g19380 Fragaria vesca HOM05D000151 ORTHO05D000074 9.0e-06 54.7 70 41.4
FAN17G2430 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-06 54.7 67 37.3
FAN20G0623 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-06 54.7 66 42.4
FAN24G1140 Fragaria x ananassa HOM05D000151 ORTHO05D000074 9.0e-06 54.7 66 42.4
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 9.0e-06 54.7 79 38.0
Gorai.006G238900 Gossypium raimondii HOM05D000151 ORTHO05D000074 9.0e-06 54.7 105 32.4
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 9.0e-06 54.7 79 38.0
PSO210G7353 Papaver somniferum HOM05D000151 ORTHO05D000074 9.0e-06 54.7 79 36.7
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 9.0e-06 54.7 82 37.8
Rhsim02G0249500 Rhododendron simsii HOM05D000151 ORTHO05D000074 9.0e-06 54.7 75 37.3
RcHm_v2.0_Chr2g0108321 Rosa chinensis HOM05D000151 ORTHO05D000074 9.0e-06 54.7 82 39.0
RcHm_v2.0_Chr4g0442931 Rosa chinensis HOM05D000151 ORTHO05D000074 9.0e-06 54.7 68 41.2


User provided reference genes

Program Settings