Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia39219 Actinidia chinensis HOM05D001739 ORTHO05D021162 1.1e-128 463.4 239 100.0
Actinidia09323 Actinidia chinensis HOM05D001739 ORTHO05D006605 2.0e-42 176.8 111 84.7
vmacro07843 Vaccinium macrocarpon HOM05D001739 ORTHO05D006605 3.5e-31 139.4 151 57.0
Rhsim03G0025300 Rhododendron simsii HOM05D001739 ORTHO05D006605 5.8e-26 122.1 137 56.9
Rhsim03G0025600 Rhododendron simsii HOM05D001724 ORTHO05D021162 5.8e-26 122.1 125 62.4
Rhsim09G0183000 Rhododendron simsii HOM05D001739 ORTHO05D021162 8.4e-25 118.2 125 60.8
CSS0037723 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D006605 1.1e-24 117.9 148 50.7
Dinv07243 Davidia involucrata HOM05D001739 ORTHO05D021162 1.1e-24 117.9 153 50.3
Dinv12499 Davidia involucrata HOM05D001739 ORTHO05D006605 1.9e-24 117.1 152 50.7
Rhsim09G0183100 Rhododendron simsii HOM05D001739 ORTHO05D006605 1.8e-22 110.5 102 63.7
Rhsim03G0026000 Rhododendron simsii HOM05D001739 ORTHO05D007662 3.7e-20 102.8 177 43.5
Rhsim03G0026800 Rhododendron simsii HOM05D006106 ORTHO05D007662 1.1e-19 101.3 89 65.2
Rhsim09G0172800 Rhododendron simsii HOM05D001739 ORTHO05D021162 5.5e-16 89.0 115 52.2
Rhsim03G0025700 Rhododendron simsii HOM05D006106 ORTHO05D007662 2.2e-12 77.0 86 58.1
GSVIVG01033265001 Vitis vinifera HOM05D001739 ORTHO05D006605 2.2e-12 77.0 149 41.6
TAR623G1060 Trochodendron aralioides HOM05D001739 ORTHO05D006605 2.8e-12 76.6 173 38.2
Hma1.2p1_1041F.1_g250990 Hydrangea macrophylla HOM05D001739 ORTHO05D006605 4.8e-12 75.9 169 37.9
QL07p000806 Quercus lobata HOM05D001739 ORTHO05D006605 1.8e-11 73.9 142 38.0
MSTRG.19857 Avicennia marina HOM05D001739 ORTHO05D006605 2.4e-11 73.6 88 48.9
TWI74G0913 Tripterygium wilfordii HOM05D001739 ORTHO05D006605 4.1e-11 72.8 121 41.3
Lju124C42G12 Lonicera japonica HOM05D001739 ORTHO05D006605 9.0e-11 71.6 166 36.7
Manes.09G020800 Manihot esculenta HOM05D001739 ORTHO05D006605 1.2e-10 71.2 148 38.5
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 2.0e-10 70.5 144 36.1
FAN02G3624 Fragaria x ananassa HOM05D001739 ORTHO05D006605 2.0e-10 70.5 89 44.9
Potri.006G050000 Populus trichocarpa HOM05D001739 ORTHO05D006605 2.0e-10 70.5 132 38.6
Prupe.7G058600 Prunus persica HOM05D001739 ORTHO05D006605 2.6e-10 70.1 88 44.3
Peaxi162Scf00130g00214 Petunia axillaris HOM05D001739 ORTHO05D006605 3.4e-10 69.7 115 42.6
Migut.J01753 Erythranthe guttata HOM05D001739 ORTHO05D006605 4.5e-10 69.3 108 39.8
FAN05G1753 Fragaria x ananassa HOM05D001739 ORTHO05D006605 4.5e-10 69.3 89 44.9
Haze_19847 Corylus avellana HOM05D006106 ORTHO05D007662 2.2e-09 67.0 135 36.3
Cfa016809 Carpinus fangiana HOM05D001739 ORTHO05D006605 3.8e-09 66.2 132 38.6
Hma1.2p1_3124F.1_g332890 Hydrangea macrophylla HOM05D001739 ORTHO05D006605 5.0e-09 65.9 164 36.0
CiPaw.09G038800 Carya illinoinensis HOM05D001739 ORTHO05D006605 6.5e-09 65.5 131 35.9
FvH4_6g24030 Fragaria vesca HOM05D001739 ORTHO05D006605 6.5e-09 65.5 89 44.9
FAN14G2551 Fragaria x ananassa HOM05D001739 ORTHO05D006605 6.5e-09 65.5 89 44.9
CAN.G676.32 Capsicum annuum HOM05D001739 ORTHO05D006605 1.1e-08 64.7 79 51.9
Psat6g118760 Pisum sativum HOM05D001739 ORTHO05D006605 1.4e-08 64.3 132 35.6
HanXRQChr10g0296671 Helianthus annuus HOM05D001739 ORTHO05D006605 1.9e-08 63.9 141 36.9
Thecc.05G152600 Theobroma cacao HOM05D001739 ORTHO05D006605 2.5e-08 63.5 88 42.0
HanXRQChr02g0038201 Helianthus annuus HOM05D001739 ORTHO05D006605 3.2e-08 63.2 121 38.0
Lj5g0016851 Lotus japonicus HOM05D001739 ORTHO05D006605 3.2e-08 63.2 139 38.8
RcHm_v2.0_Chr3g0482611 Rosa chinensis HOM05D001739 ORTHO05D006605 3.2e-08 63.2 132 37.9
Rhsim09G0173100 Rhododendron simsii HOM05D000115 ORTHO05D004134 4.2e-08 62.8 123 45.5
Glyma.02G185000 Glycine max HOM05D001739 ORTHO05D006605 5.5e-08 62.4 141 39.7
Nitab4.5_0009615g0010 Nicotiana tabacum HOM05D001739 ORTHO05D006605 5.5e-08 62.4 128 38.3
Rhsim09G0182900 Rhododendron simsii HOM05D001739 ORTHO05D021162 7.2e-08 62.0 71 54.9
Lsat_1_v5_gn_9_30560 Lactuca sativa HOM05D001739 ORTHO05D006605 9.4e-08 61.6 130 36.2
Nitab4.5_0000586g0090 Nicotiana tabacum HOM05D001739 ORTHO05D006605 9.4e-08 61.6 134 36.6
Cc06_g17620 Coffea canephora HOM05D001739 ORTHO05D006605 1.2e-07 61.2 145 33.8
Cpa.g.sc33.205 Carica papaya HOM05D001739 ORTHO05D006605 1.6e-07 60.8 118 38.1
arahy.Tifrunner.gnm1.ann1.R22IQ0 Arachis hypogaea HOM05D001739 ORTHO05D006605 2.1e-07 60.5 155 34.2
Ca_26352_v3 Cicer arietinum L. HOM05D001739 ORTHO05D006605 2.7e-07 60.1 117 41.9
ClCG10G015770 Citrullus lanatus HOM05D001739 ORTHO05D006605 2.7e-07 60.1 126 38.1
TPR.G29097 Trifolium pratense HOM05D001739 ORTHO05D006605 6.1e-07 58.9 151 33.8
VMungo0720G2535 Vigna mungo HOM05D001739 ORTHO05D006605 6.1e-07 58.9 131 38.2
arahy.Tifrunner.gnm1.ann1.LXN0TE Arachis hypogaea HOM05D001739 ORTHO05D006605 7.9e-07 58.5 155 33.5
Phvul.007G252200 Phaseolus vulgaris HOM05D001739 ORTHO05D006605 7.9e-07 58.5 121 39.7
DCAR_009063 Daucus carota HOM05D001739 ORTHO05D006605 1.0e-06 58.2 128 37.5
SalBow6G2278 Salvia bowleyana HOM05D001739 ORTHO05D006605 1.0e-06 58.2 116 34.5
Sed0004072 Sechium edule HOM05D001739 ORTHO05D006605 1.0e-06 58.2 125 34.4
Medtr1g053255 Medicago truncatula HOM05D001739 ORTHO05D006605 1.4e-06 57.8 132 36.4
Sabra06G0034900 Salix brachista HOM05D001739 ORTHO05D006605 1.4e-06 57.8 128 37.5
Solyc04g015940.3 Solanum lycopersicum HOM05D001739 ORTHO05D006605 1.4e-06 57.8 75 49.3
Gohir.D11G329500 Gossypium hirsutum HOM05D001739 ORTHO05D006605 1.8e-06 57.4 155 31.6
SGA_v2.0_scaffold105G30404 Striga asiatica HOM05D001739 ORTHO05D006605 1.8e-06 57.4 140 37.1
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 2.3e-06 57.0 136 35.3
Nn7g36309 Nelumbo nucifera HOM05D001739 ORTHO05D006605 2.3e-06 57.0 127 36.2
Atru.chr1.1111 Acer truncatum HOM05D001739 ORTHO05D006605 5.1e-06 55.8 60 53.3
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 5.1e-06 55.8 136 29.4
Ah.13g076500 Amaranthus hybridus HOM05D001739 ORTHO05D006605 6.7e-06 55.5 145 31.7


User provided reference genes

Program Settings