Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia36730 Actinidia chinensis HOM05D005033 ORTHO05D007005 2.7e-58 228.4 112 100.0
Actinidia22298 Actinidia chinensis HOM05D005033 ORTHO05D007005 1.2e-53 213.0 105 100.0
Dinv31275 Davidia involucrata HOM05D005033 ORTHO05D007005 6.7e-49 197.2 105 91.4
Hma1.2p1_0446F.1_g154670 Hydrangea macrophylla HOM05D005033 ORTHO05D007005 1.1e-48 196.4 105 91.4
GSVIVG01034665001 Vitis vinifera HOM05D005033 ORTHO05D007005 1.1e-48 196.4 105 90.5
CSS0041797 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 1.3e-47 193.0 105 88.6
PGR083G2464 Punica granatum HOM05D005033 ORTHO05D007005 1.6e-47 192.6 105 85.7
Atru.chr13.2088 Acer truncatum HOM05D005033 ORTHO05D007005 2.4e-46 188.7 105 83.8
CSS0020475 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 4.1e-46 188.0 105 86.7
Duzib130G0002 Durio zibethinus HOM05D005033 ORTHO05D007005 1.2e-45 186.4 105 84.8
Duzib138G0857 Durio zibethinus HOM05D005033 ORTHO05D007005 1.5e-45 186.0 105 83.8
TWI34G0149 Tripterygium wilfordii HOM05D005033 ORTHO05D007005 2.0e-45 185.7 105 82.9
ClCG09G006560 Citrullus lanatus HOM05D005033 ORTHO05D007005 2.6e-45 185.3 105 81.0
Cc02_g10440 Coffea canephora HOM05D005033 ORTHO05D007005 2.6e-45 185.3 105 81.9
Oeu027297.1 Olea europaea HOM05D005033 ORTHO05D007005 2.6e-45 185.3 104 83.7
Thecc.01G170700 Theobroma cacao HOM05D005033 ORTHO05D007005 3.4e-45 184.9 105 82.9
MELO3C019859.2 Cucumis melo HOM05D005033 ORTHO05D007005 4.5e-45 184.5 105 80.0
CsaV3_2G032850 Cucumis sativus L. HOM05D005033 ORTHO05D007005 4.5e-45 184.5 105 80.0
MD07G1075700 Malus domestica HOM05D005033 ORTHO05D007005 5.9e-45 184.1 105 83.8
Potri.010G232500 Populus trichocarpa HOM05D005033 ORTHO05D007005 5.9e-45 184.1 105 82.9
Prupe.2G096600 Prunus persica HOM05D005033 ORTHO05D007005 5.9e-45 184.1 105 82.9
Cpa.g.sc116.23 Carica papaya HOM05D005033 ORTHO05D007005 7.6e-45 183.7 105 82.9
Gohir.A07G183600 Gossypium hirsutum HOM05D005033 ORTHO05D007005 7.6e-45 183.7 105 81.9
Gohir.D07G190300 Gossypium hirsutum HOM05D005033 ORTHO05D007005 7.6e-45 183.7 105 81.9
Gorai.001G212400 Gossypium raimondii HOM05D005033 ORTHO05D007005 7.6e-45 183.7 105 81.9
Lj5g0024582 Lotus japonicus HOM05D005033 ORTHO05D007005 1.0e-44 183.3 105 82.9
Nitab4.5_0006512g0050 Nicotiana tabacum HOM05D005033 ORTHO05D007005 1.7e-44 182.6 107 83.2
TAR633G0665 Trochodendron aralioides HOM05D005033 ORTHO05D007005 1.7e-44 182.6 105 83.8
Ca_10465_v3 Cicer arietinum L. HOM05D005033 ORTHO05D007005 2.2e-44 182.2 105 81.9
MD13G1165600 Malus domestica HOM05D005033 ORTHO05D007005 2.2e-44 182.2 105 81.0
Potri.008G029100 Populus trichocarpa HOM05D005033 ORTHO05D007005 2.2e-44 182.2 105 81.9
Nitab4.5_0004816g0020 Nicotiana tabacum HOM05D005033 ORTHO05D007005 2.9e-44 181.8 107 82.2
MSTRG.405 Avicennia marina HOM05D005033 ORTHO05D007005 3.8e-44 181.4 105 81.9
Eucgr.J01030 Eucalyptus grandis HOM05D005033 ORTHO05D007005 3.8e-44 181.4 105 83.8
DCAR_019312 Daucus carota HOM05D005033 ORTHO05D007005 6.5e-44 180.6 105 80.0
Nn8g40819 Nelumbo nucifera HOM05D005033 ORTHO05D007005 6.5e-44 180.6 105 83.8
CSS0012290 Camellia sinensis var. sinensis HOM05D005033 ORTHO05D007005 1.1e-43 179.9 101 86.1
Glyma.10G200300 Glycine max HOM05D005033 ORTHO05D007005 1.4e-43 179.5 105 80.0
Peaxi162Scf00450g00616 Petunia axillaris HOM05D005033 ORTHO05D007005 1.4e-43 179.5 105 81.0
Glyma.20G190200 Glycine max HOM05D005033 ORTHO05D007005 1.9e-43 179.1 105 81.0
Lalb_Chr21g0313111 Lupinus albus HOM05D005033 ORTHO05D007005 3.2e-43 178.3 105 79.0
EL10Ac3g05920 Beta vulgaris HOM05D005033 ORTHO05D007005 5.5e-43 177.6 105 79.0
VMungo0720G2563 Vigna mungo HOM05D005033 ORTHO05D007005 5.5e-43 177.6 105 80.0
Lj4A576G37 Lonicera japonica HOM05D005033 ORTHO05D007005 7.2e-43 177.2 105 80.0
Sc09g0005810 Simmondsia chinensis HOM05D005033 ORTHO05D007005 7.2e-43 177.2 100 83.0
AUR62018476 Chenopodium quinoa HOM05D005033 ORTHO05D007005 9.3e-43 176.8 105 78.1
Sabra10G0180300 Salix brachista HOM05D005033 ORTHO05D007005 9.3e-43 176.8 109 78.9
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 9.3e-43 176.8 105 79.0
Solyc05g008190.3 Solanum lycopersicum HOM05D005033 ORTHO05D007005 1.2e-42 176.4 105 80.0
Sopen05g004030 Solanum pennellii HOM05D005033 ORTHO05D007005 1.2e-42 176.4 105 80.0
PGSC0003DMG400030544 Solanum tuberosum HOM05D005033 ORTHO05D007005 1.2e-42 176.4 105 80.0
arahy.Tifrunner.gnm1.ann1.BLA122 Arachis hypogaea HOM05D005033 ORTHO05D007005 1.6e-42 176.0 105 79.0
Psat6g174240 Pisum sativum HOM05D005033 ORTHO05D007005 1.6e-42 176.0 107 78.5
CANSAT11G2161 Cannabis sativa HOM05D005033 ORTHO05D007005 2.1e-42 175.6 105 80.0
Lj4A548T13 Lonicera japonica HOM05D005033 ORTHO05D007005 2.1e-42 175.6 105 76.2
Medtr1g090877 Medicago truncatula HOM05D005033 ORTHO05D007005 2.1e-42 175.6 105 79.0
Haze_05486 Corylus avellana HOM05D005033 ORTHO05D007005 4.6e-42 174.5 112 73.2
Nitab4.5_0004816g0100 Nicotiana tabacum HOM05D005033 ORTHO05D007005 4.6e-42 174.5 107 79.4
Phvul.007G144800 Phaseolus vulgaris HOM05D005033 ORTHO05D007005 6.1e-42 174.1 105 77.1
CAN.G1334.3 Capsicum annuum HOM05D005033 ORTHO05D007005 1.3e-41 172.9 105 78.1
COL.COLO4_07176 Corchorus olitorius HOM05D005033 ORTHO05D007005 1.3e-41 172.9 105 77.1
FAN10G0702 Fragaria x ananassa HOM05D005033 ORTHO05D007005 5.1e-41 171.0 105 76.2
Manes.04G062300 Manihot esculenta HOM05D005033 ORTHO05D007005 5.1e-41 171.0 105 74.3
CDE08G1035 Ceratophyllum demersum HOM05D005033 ORTHO05D007005 8.7e-41 170.2 107 75.7
FAN01G1898 Fragaria x ananassa HOM05D005033 ORTHO05D007005 1.1e-40 169.9 106 74.5
TPR.G37792 Trifolium pratense HOM05D005033 ORTHO05D007005 1.9e-40 169.1 107 76.6
FvH4_7g06900 Fragaria vesca HOM05D005033 ORTHO05D007005 2.5e-40 168.7 105 75.2
FAN06G3772 Fragaria x ananassa HOM05D005033 ORTHO05D007005 2.5e-40 168.7 107 73.8
FAN03G1010 Fragaria x ananassa HOM05D005033 ORTHO05D007005 4.3e-40 167.9 105 75.2
RcHm_v2.0_Chr1g0336741 Rosa chinensis HOM05D005033 ORTHO05D007005 7.4e-40 167.2 105 75.2
AL3G21930 Arabidopsis lyrata HOM05D005033 ORTHO05D007005 1.3e-39 166.4 105 72.4
CARHR085050 Cardamine hirsuta HOM05D005033 ORTHO05D007005 1.3e-39 166.4 105 72.4
BcaC05g29453 Brassica carinata HOM05D005033 ORTHO05D004473 2.2e-39 165.6 107 70.1
A05p38630 Brassica napus HOM05D005033 ORTHO05D004473 2.2e-39 165.6 107 70.1
C05p57510 Brassica napus HOM05D005033 ORTHO05D004473 2.2e-39 165.6 107 70.1
BolC5t34408H Brassica oleracea HOM05D005033 ORTHO05D004473 2.2e-39 165.6 107 70.1
BraA05t22654Z Brassica rapa HOM05D005033 ORTHO05D007005 2.2e-39 165.6 107 70.1
Sp3g08810 Schrenkiella parvula HOM05D005033 ORTHO05D007005 2.2e-39 165.6 107 70.1
Hund09612 Selenicereus undatus HOM05D005033 ORTHO05D007005 2.8e-39 165.2 105 75.2
THA.LOC104826968 Tarenaya hassleriana HOM05D005033 ORTHO05D007005 2.8e-39 165.2 105 71.4
ATR0598G298 Amborella trichopoda HOM05D005033 ORTHO05D007005 3.7e-39 164.9 107 71.0
AT3G10530 Arabidopsis thaliana HOM05D005033 ORTHO05D007005 3.7e-39 164.9 105 71.4
Carub.0003s0977 Capsella rubella HOM05D005033 ORTHO05D007005 3.7e-39 164.9 105 70.5
Sed0023623 Sechium edule HOM05D005033 ORTHO05D007005 3.7e-39 164.9 105 73.3
A01p41690 Brassica napus HOM05D005033 ORTHO05D004473 4.8e-39 164.5 107 70.1
BraA01t04244Z Brassica rapa HOM05D005033 ORTHO05D007005 4.8e-39 164.5 107 70.1
Aa31LG4G2160 Aethionema arabicum HOM05D005033 ORTHO05D007005 1.1e-38 163.3 105 70.5
BolC1t05387H Brassica oleracea HOM05D005033 ORTHO05D007005 1.1e-38 163.3 107 69.2
CiPaw.12G008100 Carya illinoinensis HOM05D005033 ORTHO05D007005 1.1e-38 163.3 106 75.5
Ah.01g017010 Amaranthus hybridus HOM05D005033 ORTHO05D007005 1.4e-38 162.9 105 70.5
BcaNung06294 Brassica carinata HOM05D005033 ORTHO05D007005 1.8e-38 162.5 107 68.2
ECA236G1450 Erigeron canadensis HOM05D005033 ORTHO05D007005 2.4e-38 162.2 105 71.4
BcaNung04933 Brassica carinata HOM05D005033 ORTHO05D007005 4.1e-38 161.4 107 68.2
Lsat_1_v5_gn_5_142541 Lactuca sativa HOM05D005033 ORTHO05D007005 4.1e-38 161.4 105 71.4
QL05p060417 Quercus lobata HOM05D005033 ORTHO05D007005 1.2e-37 159.8 106 72.6
Aqoxy7G00894 Aquilegia oxysepala HOM05D005033 ORTHO05D007005 1.5e-37 159.5 105 71.4
BcaB04g21233 Brassica carinata HOM05D005033 ORTHO05D007005 2.0e-37 159.1 107 68.2
Aqoxy6G00730 Aquilegia oxysepala HOM05D005033 ORTHO05D007005 3.4e-37 158.3 105 71.4
HPP92_022999 Vanilla planifolia HOM05D005033 ORTHO05D007005 5.9e-37 157.5 105 69.5
HanXRQChr04g0126221 Helianthus annuus HOM05D005033 ORTHO05D007005 1.3e-36 156.4 105 70.5
unitig_899.g15062 Utricularia gibba HOM05D005033 ORTHO05D007005 6.5e-36 154.1 105 70.5
Sed0004918 Sechium edule HOM05D005033 ORTHO05D007005 1.1e-35 153.3 96 69.8
Rhsim02G0215300 Rhododendron simsii HOM05D005033 ORTHO05D007005 1.9e-35 152.5 87 83.9
arahy.Tifrunner.gnm1.ann1.FAT33H Arachis hypogaea HOM05D005033 ORTHO05D007005 4.2e-35 151.4 158 52.5
Actinidia13190 Actinidia chinensis HOM05D005033 ORTHO05D007005 7.2e-35 150.6 76 96.1
PSO063G4428 Papaver somniferum HOM05D005033 ORTHO05D007005 9.4e-35 150.2 100 70.0
PSO339G5947 Papaver somniferum HOM05D005033 ORTHO05D007005 2.7e-34 148.7 100 70.0
Migut.F01668 Erythranthe guttata HOM05D005033 ORTHO05D007005 3.6e-34 148.3 105 71.4
Thhalv10020478m.g Eutrema salsugineum HOM05D005033 ORTHO05D007005 1.8e-33 146.0 105 61.9
AagrBONN_evm.TU.Sc2ySwM_362.274 Anthoceros agrestis HOM05D005033 ORTHO05D007005 2.0e-32 142.5 105 61.9
Zm00001eb272000 Zea mays HOM05D005033 ORTHO05D007005 9.7e-32 140.2 105 62.9
Os01g0183100 Oryza sativa ssp. japonica HOM05D005033 ORTHO05D007005 1.3e-31 139.8 107 58.9
Mapoly0082s0024 Marchantia polymorpha HOM05D005033 ORTHO05D007005 2.4e-30 135.6 105 60.0
SHI01926 Sapria himalayana HOM05D005033 ORTHO05D007005 4.1e-30 134.8 148 51.4
Ciclev10003719m.g Citrus clementina HOM05D005033 ORTHO05D007005 5.3e-30 134.4 105 66.7
CBR_g12704 Chara braunii HOM05D005033 ORTHO05D007005 1.3e-28 129.8 105 56.2
Pp3c1_3590 Physcomitrium patens HOM05D005033 ORTHO05D007005 2.2e-28 129.0 105 57.1
SMO367G1111 Selaginella moellendorffii HOM05D005033 ORTHO05D007005 1.4e-27 126.3 105 58.1
Cre12.g502800 Chlamydomonas reinhardtii HOM05D005033 ORTHO05D007005 2.7e-26 122.1 106 54.7
MCO04G094 Micromonas commoda HOM05D005033 ORTHO05D007005 3.0e-25 118.6 105 52.4
PSO591G0084 Papaver somniferum HOM05D005033 ORTHO05D007005 4.4e-24 114.8 76 71.1
vmacro04570 Vaccinium macrocarpon HOM05D005033 ORTHO05D007005 3.7e-23 111.7 106 59.4
PRCOL_00001195 Prasinoderma coloniale HOM05D005033 ORTHO05D007005 3.5e-21 105.1 106 50.9
Thhalv10016037m.g Eutrema salsugineum HOM05D005033 ORTHO05D007005 8.5e-20 100.5 88 56.8
Cfa025315 Carpinus fangiana HOM05D005033 ORTHO05D007005 1.4e-17 93.2 106 42.5
Ciclev10003777m.g Citrus clementina HOM05D005033 ORTHO05D007005 1.8e-17 92.8 53 81.1
Sc12g0008670 Simmondsia chinensis HOM05D005033 ORTHO05D007005 2.2e-15 85.9 48 85.4
MD08G1003300 Malus domestica HOM05D005033 ORTHO05D036613 5.9e-13 77.8 65 53.8
Prupe.1G365200 Prunus persica HOM05D005033 ORTHO05D007005 2.9e-12 75.5 77 51.9
Peaxi162Scf00159g00111 Petunia axillaris HOM05D005033 ORTHO05D007005 2.0e-08 62.8 34 85.3
RcHm_v2.0_Chr1g0336791 Rosa chinensis HOM05D005033 ORTHO05D036613 9.1e-06 53.9 34 70.6


User provided reference genes

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