Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia36714 Actinidia chinensis HOM05D003920 ORTHO05D004877 6.4e-159 563.9 263 100.0
Actinidia31057 Actinidia chinensis HOM05D003920 ORTHO05D004877 2.7e-125 452.2 303 75.2
Rhsim07G0054700 Rhododendron simsii HOM05D003920 ORTHO05D004877 1.3e-90 337.0 351 52.1
Dinv43454 Davidia involucrata HOM05D003920 ORTHO05D004877 2.4e-89 332.8 361 50.1
Actinidia24671 Actinidia chinensis HOM05D003920 ORTHO05D004877 1.0e-87 327.4 244 67.2
Peaxi162Scf00428g00618 Petunia axillaris HOM05D003920 ORTHO05D004877 7.2e-86 321.2 359 47.6
Manes.10G144700 Manihot esculenta HOM05D003920 ORTHO05D004877 3.0e-84 315.8 361 47.4
PSO339G5616 Papaver somniferum HOM05D003920 ORTHO05D004877 3.0e-84 315.8 363 47.4
PSO384G3532 Papaver somniferum HOM05D003920 ORTHO05D004877 6.7e-84 314.7 363 47.4
vmacro13655 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 6.7e-84 314.7 420 44.3
Nn2g15431 Nelumbo nucifera HOM05D003920 ORTHO05D004877 8.8e-84 314.3 352 48.0
FvH4_7g00890 Fragaria vesca HOM05D003920 ORTHO05D004877 2.0e-83 313.2 362 49.2
FAN06G2354 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.0e-83 313.2 362 49.2
ECA248G0446 Erigeron canadensis HOM05D003920 ORTHO05D004877 3.3e-83 312.4 346 50.3
HanXRQChr01g0016141 Helianthus annuus HOM05D003920 ORTHO05D004877 5.7e-83 311.6 346 48.8
Aqoxy2G00138 Aquilegia oxysepala HOM05D003920 ORTHO05D004877 7.5e-83 311.2 361 48.8
MD02G1313900 Malus domestica HOM05D003920 ORTHO05D004877 9.7e-83 310.8 361 48.2
Peaxi162Scf00407g00639 Petunia axillaris HOM05D003920 ORTHO05D004877 1.3e-82 310.5 359 46.2
Sabra09G0046300 Salix brachista HOM05D003920 ORTHO05D004877 3.7e-82 308.9 357 47.6
Psat5g204200 Pisum sativum HOM05D003920 ORTHO05D004877 1.4e-81 307.0 357 46.5
MD07G1008500 Malus domestica HOM05D003920 ORTHO05D004877 1.8e-81 306.6 361 47.9
Nn7g36164 Nelumbo nucifera HOM05D003920 ORTHO05D004877 2.4e-81 306.2 352 47.2
Potri.001G268200 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.2e-80 303.9 359 46.2
Potri.009G062600 Populus trichocarpa HOM05D003920 ORTHO05D004877 1.6e-80 303.5 359 47.6
Prupe.2G011700 Prunus persica HOM05D003920 ORTHO05D004877 2.0e-80 303.1 366 47.5
Sabra16G0164300 Salix brachista HOM05D003920 ORTHO05D004877 2.0e-80 303.1 361 47.4
Sc10g0000010 Simmondsia chinensis HOM05D003920 ORTHO05D004877 2.7e-80 302.8 323 49.5
Ca_27172_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 7.7e-80 301.2 357 45.4
Lj9C630T11 Lonicera japonica HOM05D003920 ORTHO05D004877 7.7e-80 301.2 321 51.4
Medtr3g028190 Medicago truncatula HOM05D003920 ORTHO05D004877 1.0e-79 300.8 357 45.7
CAN.G709.1 Capsicum annuum HOM05D003920 ORTHO05D004877 2.2e-79 299.7 349 48.4
Gohir.A08G027700 Gossypium hirsutum HOM05D003920 ORTHO05D004877 6.5e-79 298.1 360 46.9
Lalb_Chr01g0015291 Lupinus albus HOM05D003920 ORTHO05D004877 6.5e-79 298.1 356 45.8
Sopen10g011530 Solanum pennellii HOM05D003920 ORTHO05D004877 1.9e-78 296.6 360 46.9
Glyma.15G272400 Glycine max HOM05D003920 ORTHO05D004877 3.2e-78 295.8 362 44.2
Gohir.D08G038400 Gossypium hirsutum HOM05D003920 ORTHO05D004877 4.2e-78 295.4 360 46.7
Lj3g0003225 Lotus japonicus HOM05D003920 ORTHO05D004877 5.5e-78 295.0 358 45.3
VMungo1080G0709 Vigna mungo HOM05D003920 ORTHO05D004877 7.2e-78 294.7 362 44.5
DCAR_003208 Daucus carota HOM05D003920 ORTHO05D004877 1.2e-77 293.9 359 47.1
Solyc10g038000.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 2.1e-77 293.1 360 46.7
Eucgr.J01264 Eucalyptus grandis HOM05D003920 ORTHO05D004877 2.7e-77 292.7 362 44.8
Gorai.004G036900 Gossypium raimondii HOM05D003920 ORTHO05D004877 2.7e-77 292.7 360 46.4
Phvul.005G019900 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 3.6e-77 292.4 362 43.9
TPR.G12140 Trifolium pratense HOM05D003920 ORTHO05D004877 3.6e-77 292.4 370 44.3
Thhalv10010518m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 4.7e-77 292.0 339 46.6
Ciclev10031666m.g Citrus clementina HOM05D003920 ORTHO05D004877 6.1e-77 291.6 309 50.5
Migut.N01471 Erythranthe guttata HOM05D003920 ORTHO05D004877 6.1e-77 291.6 344 45.9
CSS0030964 Camellia sinensis var. sinensis HOM05D003920 ORTHO05D004877 8.0e-77 291.2 327 49.5
Glyma.08G153800 Glycine max HOM05D003920 ORTHO05D004877 1.0e-76 290.8 362 43.4
Solyc01g087030.3 Solanum lycopersicum HOM05D003920 ORTHO05D004877 1.4e-76 290.4 358 43.9
arahy.Tifrunner.gnm1.ann1.Z50281 Arachis hypogaea HOM05D003920 ORTHO05D004877 2.3e-76 289.7 358 46.1
Sed0011667 Sechium edule HOM05D003920 ORTHO05D004877 2.3e-76 289.7 358 45.3
BraA08t33064Z Brassica rapa HOM05D003920 ORTHO05D004877 3.0e-76 289.3 328 47.6
Nitab4.5_0000634g0100 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.0e-76 289.3 378 42.1
Sp5g00030 Schrenkiella parvula HOM05D003920 ORTHO05D004877 5.2e-76 288.5 253 56.1
TWI73G0359 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 5.2e-76 288.5 387 42.9
Thhalv10023829m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 6.8e-76 288.1 328 48.2
Sopen01g034110 Solanum pennellii HOM05D003920 ORTHO05D004877 6.8e-76 288.1 358 43.6
TAR369G0176 Trochodendron aralioides HOM05D003920 ORTHO05D004877 8.8e-76 287.7 363 44.6
PGR044G2195 Punica granatum HOM05D003920 ORTHO05D004877 1.5e-75 287.0 363 44.4
BcaC07g37767 Brassica carinata HOM05D003920 ORTHO05D004877 2.0e-75 286.6 332 46.7
CARHR291420 Cardamine hirsuta HOM05D003920 ORTHO05D004877 5.7e-75 285.0 343 45.5
CDE04G0006 Ceratophyllum demersum HOM05D003920 ORTHO05D004877 1.3e-74 283.9 350 45.1
MSTRG.5016 Avicennia marina HOM05D003920 ORTHO05D004877 1.7e-74 283.5 316 48.4
Nitab4.5_0011837g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.7e-74 282.3 371 42.0
COL.COLO4_23923 Corchorus olitorius HOM05D003920 ORTHO05D004877 6.3e-74 281.6 322 47.8
Sp1g00020 Schrenkiella parvula HOM05D003920 ORTHO05D004877 1.4e-73 280.4 353 43.9
ATR0605G260 Amborella trichopoda HOM05D003920 ORTHO05D004877 2.4e-73 279.6 349 44.4
arahy.Tifrunner.gnm1.ann1.LBVL0K Arachis hypogaea HOM05D003920 ORTHO05D004877 3.1e-73 279.3 357 44.5
SEGI_34678 Sequoiadendron giganteum HOM05D003920 ORTHO05D004877 4.1e-73 278.9 331 46.8
SGA_v2.0_scaffold167G38446 Striga asiatica HOM05D003920 ORTHO05D004877 9.1e-73 277.7 332 46.1
MBI04_g13623_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D004877 3.5e-72 275.8 351 43.9
unitig_85.g27216 Utricularia gibba HOM05D003920 ORTHO05D004877 4.5e-72 275.4 337 44.5
TAR633G1074 Trochodendron aralioides HOM05D003920 ORTHO05D004877 5.9e-72 275.0 341 46.0
DCAR_022405 Daucus carota HOM05D003920 ORTHO05D004877 1.3e-71 273.9 359 44.3
SalBow5G4770 Salvia bowleyana HOM05D003920 ORTHO05D004877 1.7e-71 273.5 336 44.0
AT3G08505 Arabidopsis thaliana HOM05D003920 ORTHO05D004877 5.0e-71 271.9 326 44.5
A08p28590 Brassica napus HOM05D003920 ORTHO05D004877 1.5e-70 270.4 324 45.7
QL04p007133 Quercus lobata HOM05D003920 ORTHO05D004877 1.5e-70 270.4 322 45.7
AL3G19480 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 2.5e-70 269.6 321 44.9
Zm00001eb381600 Zea mays HOM05D003920 ORTHO05D004877 1.2e-69 267.3 365 42.7
Sp3g06990 Schrenkiella parvula HOM05D003920 ORTHO05D004877 2.1e-69 266.5 337 43.9
HPP92_005768 Vanilla planifolia HOM05D003920 ORTHO05D004877 2.8e-69 266.2 363 42.4
Thhalv10021103m.g Eutrema salsugineum HOM05D003920 ORTHO05D004877 4.0e-68 262.3 336 42.9
Gorai.004G173300 Gossypium raimondii HOM05D003920 ORTHO05D004877 4.0e-68 262.3 355 42.8
THA.LOC104827426 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 8.9e-68 261.2 347 41.5
MSTRG.20593 Avicennia marina HOM05D003920 ORTHO05D004877 1.3e-66 257.3 312 46.2
RcHm_v2.0_Chr1g0315781 Rosa chinensis HOM05D003920 ORTHO05D004877 1.3e-66 257.3 328 45.1
CARHR082810 Cardamine hirsuta HOM05D003920 ORTHO05D004877 1.7e-66 256.9 320 42.2
BcaB03g11569 Brassica carinata HOM05D003920 ORTHO05D004877 2.8e-66 256.1 298 45.6
Aa31LG10G17420 Aethionema arabicum HOM05D003920 ORTHO05D004877 3.7e-66 255.8 423 38.1
AUR62009376 Chenopodium quinoa HOM05D003920 ORTHO05D004877 3.7e-66 255.8 335 42.1
THA.LOC104819067 Tarenaya hassleriana HOM05D003920 ORTHO05D004877 4.9e-66 255.4 357 40.9
BcaC09g47976 Brassica carinata HOM05D003920 ORTHO05D004877 1.1e-65 254.2 309 44.3
BraA03t12740Z Brassica rapa HOM05D003920 ORTHO05D004877 1.8e-65 253.4 296 46.3
Pp3c5_25680 Physcomitrium patens HOM05D003920 ORTHO05D004877 1.8e-65 253.4 339 41.0
FAN03G2194 Fragaria x ananassa HOM05D003920 ORTHO05D004877 2.4e-65 253.1 328 44.5
FAN01G3017 Fragaria x ananassa HOM05D003920 ORTHO05D004877 7.0e-65 251.5 328 44.5
Atru.chr11.2647 Acer truncatum HOM05D003920 ORTHO05D004877 2.0e-64 250.0 314 44.6
EL10Ac2g04315 Beta vulgaris HOM05D003920 ORTHO05D004877 2.0e-64 250.0 334 42.2
A03p35650 Brassica napus HOM05D003920 ORTHO05D004877 2.0e-64 250.0 284 46.8
Haze_03212 Corylus avellana HOM05D003920 ORTHO05D004877 3.5e-64 249.2 322 44.1
SGA_v2.0_scaffold24G10678 Striga asiatica HOM05D003920 ORTHO05D004877 4.5e-64 248.8 288 43.1
BolC3t16599H Brassica oleracea HOM05D003920 ORTHO05D004877 5.9e-64 248.4 294 46.6
BraA01t04343Z Brassica rapa HOM05D003920 ORTHO05D004877 7.8e-64 248.1 308 43.2
Carub.0003s0765 Capsella rubella HOM05D003920 ORTHO05D004877 1.0e-63 247.7 330 42.4
Lsat_1_v5_gn_1_107981 Lactuca sativa HOM05D003920 ORTHO05D004877 1.0e-63 247.7 307 45.3
Thecc.01G412100 Theobroma cacao HOM05D003920 ORTHO05D004877 2.3e-63 246.5 327 43.1
BcaC01g04265 Brassica carinata HOM05D003920 ORTHO05D004877 2.9e-63 246.1 285 47.0
BcaB04g21254 Brassica carinata HOM05D003920 ORTHO05D004877 3.8e-63 245.7 325 42.5
C03p43290 Brassica napus HOM05D003920 ORTHO05D004877 5.0e-63 245.4 282 47.2
Cc02_g27790 Coffea canephora HOM05D003920 ORTHO05D004877 2.1e-61 240.0 329 41.9
Gohir.D08G166100 Gossypium hirsutum HOM05D003920 ORTHO05D004877 6.1e-61 238.4 232 51.7
AL5G46410 Arabidopsis lyrata HOM05D003920 ORTHO05D004877 4.0e-60 235.7 319 41.7
BcaC07g39147 Brassica carinata HOM05D003920 ORTHO05D004877 9.8e-59 231.1 289 43.3
BolC8t48154H Brassica oleracea HOM05D003920 ORTHO05D004877 8.3e-58 228.0 298 42.3
A08p10660 Brassica napus HOM05D003920 ORTHO05D004877 1.4e-57 227.3 296 42.6
Carub.0005s3016 Capsella rubella HOM05D003920 ORTHO05D004877 3.2e-57 226.1 319 39.8
CsaV3_7G031170 Cucumis sativus L. HOM05D003920 ORTHO05D004877 3.2e-57 226.1 328 42.4
MELO3C023541.2 Cucumis melo HOM05D003920 ORTHO05D004877 5.4e-57 225.3 328 42.4
Zm00001eb252860 Zea mays HOM05D003920 ORTHO05D004877 1.6e-56 223.8 325 41.2
BolC8t49780H Brassica oleracea HOM05D003920 ORTHO05D004877 1.3e-55 220.7 297 41.8
Lj7A569G59 Lonicera japonica HOM05D003920 ORTHO05D004877 6.6e-55 218.4 233 52.8
Peaxi162Scf00148g00610 Petunia axillaris HOM05D003920 ORTHO05D004877 1.9e-54 216.9 264 45.8
Nitab4.5_0000254g0170 Nicotiana tabacum HOM05D003920 ORTHO05D004877 3.3e-54 216.1 212 52.4
SMO203G0245 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 4.3e-54 215.7 319 38.9
Aa31LG5G18640 Aethionema arabicum HOM05D003920 ORTHO05D004877 2.0e-51 206.8 245 46.1
Oeu039134.1 Olea europaea HOM05D003920 ORTHO05D004877 3.4e-51 206.1 108 87.0
Manes.07G005000 Manihot esculenta HOM05D003920 ORTHO05D004877 1.1e-49 201.1 297 39.4
GSVIVG01032073001 Vitis vinifera HOM05D003920 ORTHO05D004877 3.2e-49 199.5 108 83.3
TWI53G1741 Tripterygium wilfordii HOM05D003920 ORTHO05D004877 1.0e-47 194.5 282 40.1
Mapoly0042s0020 Marchantia polymorpha HOM05D003920 ORTHO05D004877 1.7e-47 193.7 127 63.0
ClCG09G004250 Citrullus lanatus HOM05D003920 ORTHO05D004877 5.6e-46 188.7 208 49.5
Nitab4.5_0001299g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.1e-44 184.5 328 37.5
C08p21410 Brassica napus HOM05D003920 ORTHO05D004877 5.2e-44 182.2 217 43.3
Potri.004G134400 Populus trichocarpa HOM05D003920 ORTHO05D004877 6.8e-44 181.8 284 37.7
Hund03665 Selenicereus undatus HOM05D003920 ORTHO05D004877 2.9e-42 176.4 318 36.2
unitig_26.g8826 Utricularia gibba HOM05D003920 ORTHO05D004877 3.7e-42 176.0 234 41.5
PGR044G2672 Punica granatum HOM05D003920 ORTHO05D004877 8.3e-42 174.9 211 43.1
arahy.Tifrunner.gnm1.ann1.3CZ6TN Arachis hypogaea HOM05D003920 ORTHO05D004877 1.4e-41 174.1 215 43.7
AUR62023057 Chenopodium quinoa HOM05D003920 ORTHO05D004877 1.9e-41 173.7 291 37.1
arahy.Tifrunner.gnm1.ann1.NHZH5I Arachis hypogaea HOM05D003920 ORTHO05D004877 4.1e-41 172.6 212 43.9
Nitab4.5_0004786g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 7.1e-41 171.8 343 35.6
vmacro08182 Vaccinium macrocarpon HOM05D003920 ORTHO05D004877 9.2e-41 171.4 296 37.2
Phvul.011G110100 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 1.2e-40 171.0 91 80.2
Sabra04G0083700 Salix brachista HOM05D003920 ORTHO05D004877 1.2e-40 171.0 249 40.2
Cre06.g278136 Chlamydomonas reinhardtii HOM05D003920 ORTHO05D004877 2.3e-39 166.8 245 37.6
Glyma.15G273000 Glycine max HOM05D003920 ORTHO05D004877 3.9e-39 166.0 137 57.7
TPR.G12281 Trifolium pratense HOM05D003920 ORTHO05D004877 3.9e-39 166.0 302 34.1
Medtr3g028170 Medicago truncatula HOM05D003920 ORTHO05D004877 1.1e-38 164.5 311 34.7
Nitab4.5_0003190g0010 Nicotiana tabacum HOM05D003920 ORTHO05D004877 1.5e-38 164.1 188 48.9
Lj3g0002246 Lotus japonicus HOM05D003920 ORTHO05D004877 2.5e-38 163.3 111 61.3
Glyma.08G154100 Glycine max HOM05D003920 ORTHO05D004877 5.6e-38 162.2 313 34.5
VMungo1080G1751 Vigna mungo HOM05D003920 ORTHO05D004877 7.3e-38 161.8 181 45.3
Phvul.005G020000 Phaseolus vulgaris HOM05D003920 ORTHO05D004877 2.1e-37 160.2 138 54.3
Lalb_Chr20g0108061 Lupinus albus HOM05D003920 ORTHO05D004877 3.6e-37 159.5 310 33.5
Lalb_Chr01g0015331 Lupinus albus HOM05D003920 ORTHO05D004877 2.4e-36 156.8 199 41.7
Ca_14370_v3 Cicer arietinum L. HOM05D003920 ORTHO05D004877 8.9e-36 154.8 108 64.8
Psat5g204240 Pisum sativum HOM05D003920 ORTHO05D004877 2.6e-35 153.3 214 38.3
AagrBONN_evm.TU.Sc2ySwM_344.3645 Anthoceros agrestis HOM05D003920 ORTHO05D004877 2.9e-34 149.8 325 30.2
Gohir.A08G145200 Gossypium hirsutum HOM05D003920 ORTHO05D004877 1.4e-33 147.5 292 34.6
PRCOL_00005356 Prasinoderma coloniale HOM05D003920 ORTHO05D004877 2.1e-29 133.7 242 34.3
arahy.Tifrunner.gnm1.ann1.HIY6S0 Arachis hypogaea HOM05D003920 ORTHO05D004877 8.1e-29 131.7 203 37.4
arahy.Tifrunner.gnm1.ann1.YQ2HRW Arachis hypogaea HOM05D003920 ORTHO05D004877 4.4e-27 125.9 93 58.1
QL04p005704 Quercus lobata HOM05D003920 ORTHO05D004877 3.5e-16 89.7 64 64.1
TPR.G31394 Trifolium pratense HOM05D002628 ORTHO05D002785 1.6e-13 80.9 95 41.1
QL04p032014 Quercus lobata HOM05D003920 ORTHO05D004877 2.1e-13 80.5 38 86.8
QL04p032319 Quercus lobata HOM05D003920 ORTHO05D004877 4.8e-13 79.3 48 70.8
SMO203G0166 Selaginella moellendorffii HOM05D003920 ORTHO05D004877 3.4e-11 73.2 70 47.1
Cc02_g27780 Coffea canephora HOM05D003920 ORTHO05D017698 2.2e-10 70.5 41 80.5
BolC8t48153H Brassica oleracea HOM05D003920 ORTHO05D017698 1.4e-09 67.8 44 72.7
BolC8t49779H Brassica oleracea HOM05D003920 ORTHO05D017698 1.6e-08 64.3 40 75.0
BraA08t34788Z Brassica rapa HOM05D003920 ORTHO05D017698 1.6e-08 64.3 40 75.0
QL93p2025_0050 Quercus lobata HOM05D003920 ORTHO05D337666 2.7e-08 63.5 235 28.5
MBI17_g06171_MAGBIO Magnolia biondii HOM05D003920 ORTHO05D017698 1.0e-07 61.6 82 46.3
QL05p013448 Quercus lobata HOM05D001342 ORTHO05D017698 2.5e-06 57.0 44 63.6


User provided reference genes

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