Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia36698 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.3e-208 729.6 381 100.0
Actinidia14324 Actinidia chinensis HOM05D004019 ORTHO05D005136 7.6e-36 155.6 80 97.5
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 5.1e-24 116.3 123 63.4
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 1.1e-21 108.6 123 59.3
Hma1.2p1_0140F.1_g063770 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 2.4e-21 107.5 123 58.5
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 3.1e-21 107.1 123 59.3
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 9.0e-21 105.5 123 58.5
Lj8C607G10 Lonicera japonica HOM05D004019 ORTHO05D005136 2.0e-20 104.4 123 57.7
vmacro08818 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 2.6e-20 104.0 123 58.5
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 5.8e-20 102.8 123 56.9
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 5.8e-20 102.8 123 56.9
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 1.0e-19 102.1 142 51.4
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.3e-19 101.7 123 56.1
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 1.3e-19 101.7 123 56.1
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 1.7e-19 101.3 123 55.3
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 2.2e-19 100.9 142 50.7
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 2.9e-19 100.5 123 54.5
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 2.9e-19 100.5 197 42.6
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 4.9e-19 99.8 123 55.3
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 4.9e-19 99.8 123 55.3
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 6.5e-19 99.4 197 40.6
Peaxi162Scf00105g00818 Petunia axillaris HOM05D004019 ORTHO05D005136 6.5e-19 99.4 122 54.9
VMungo1309G1295 Vigna mungo HOM05D004019 ORTHO05D005136 1.1e-18 98.6 123 54.5
FAN20G1524 Fragaria x ananassa HOM05D004019 ORTHO05D005136 1.4e-18 98.2 123 54.5
Oeu063261.5 Olea europaea HOM05D004019 ORTHO05D005136 1.9e-18 97.8 120 55.0
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 3.2e-18 97.1 123 54.5
Phvul.009G099400 Phaseolus vulgaris HOM05D004019 ORTHO05D005136 3.2e-18 97.1 123 53.7
vmacro11105 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 3.2e-18 97.1 93 65.6
Haze_21654 Corylus avellana HOM05D004019 ORTHO05D005136 4.2e-18 96.7 123 53.7
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 4.2e-18 96.7 123 53.7
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 5.5e-18 96.3 142 47.2
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 7.1e-18 95.9 123 52.8
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 7.1e-18 95.9 142 48.6
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 9.3e-18 95.5 123 52.8
Gohir.D05G051300 Gossypium hirsutum HOM05D004019 ORTHO05D005136 1.2e-17 95.1 123 53.7
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 1.2e-17 95.1 123 53.7
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 1.2e-17 95.1 143 47.6
Manes.03G064200 Manihot esculenta HOM05D004019 ORTHO05D005136 2.1e-17 94.4 123 52.8
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 2.7e-17 94.0 142 49.3
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 2.7e-17 94.0 123 52.0
Hma1.2p1_0140F.1_g063780 Hydrangea macrophylla HOM05D004019 ORTHO05D005136 3.5e-17 93.6 93 62.4
Solyc08g068010.2 Solanum lycopersicum HOM05D004019 ORTHO05D005136 3.5e-17 93.6 122 51.6
DCAR_006256 Daucus carota HOM05D004019 ORTHO05D005136 4.6e-17 93.2 123 52.0
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 4.6e-17 93.2 143 48.3
QL12p030977 Quercus lobata HOM05D004019 ORTHO05D005136 4.6e-17 93.2 123 52.0
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 4.6e-17 93.2 123 52.0
Gohir.A05G049350 Gossypium hirsutum HOM05D004019 ORTHO05D005136 6.0e-17 92.8 123 52.8
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 1.3e-16 91.7 197 38.1
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 1.8e-16 91.3 123 50.4
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 2.3e-16 90.9 123 51.2
MELO3C003655.2 Cucumis melo HOM05D004019 ORTHO05D005136 3.0e-16 90.5 120 50.8
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 3.0e-16 90.5 120 50.8
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 5.1e-16 89.7 123 50.4
Actinidia23592 Actinidia chinensis HOM05D004019 ORTHO05D005136 5.1e-16 89.7 162 44.4
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 8.7e-16 89.0 123 49.6
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 1.1e-15 88.6 120 50.0
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 1.1e-15 88.6 122 49.2
unitig_747.g21875 Utricularia gibba HOM05D004019 ORTHO05D005136 1.1e-15 88.6 119 49.6
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 1.5e-15 88.2 123 49.6
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 1.5e-15 88.2 197 39.1
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 1.5e-15 88.2 123 49.6
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 1.9e-15 87.8 116 50.9
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 4.3e-15 86.7 114 53.5
Ah.12g060340 Amaranthus hybridus HOM05D004019 ORTHO05D005136 2.1e-14 84.3 143 42.0
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 3.7e-14 83.6 123 47.2
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 8.2e-14 82.4 150 42.0
Cpa.g.sc205.26 Carica papaya HOM05D004019 ORTHO05D005136 1.1e-13 82.0 123 49.6
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 1.1e-13 82.0 150 42.0
CSS0024914 Camellia sinensis var. sinensis HOM05D003810 ORTHO05D004416 1.4e-13 81.6 176 41.5
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 1.8e-13 81.3 120 50.0
Rhsim04G0009500 Rhododendron simsii HOM05D003810 ORTHO05D004416 2.4e-13 80.9 176 39.2
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 2.4e-13 80.9 124 50.0
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 3.1e-13 80.5 119 47.1
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 4.1e-13 80.1 198 36.9
Thhalv10000005m.g Eutrema salsugineum HOM05D004019 ORTHO05D005136 1.2e-12 78.6 124 48.4
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 1.2e-12 78.6 125 50.4
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 1.2e-12 78.6 197 34.5
Actinidia00838 Actinidia chinensis HOM05D003810 ORTHO05D004416 2.0e-12 77.8 176 38.1
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 2.0e-12 77.8 123 48.0
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 2.0e-12 77.8 124 48.4
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 2.6e-12 77.4 124 47.6
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 2.6e-12 77.4 124 47.6
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 2.6e-12 77.4 119 47.9
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 2.6e-12 77.4 119 47.1
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 3.4e-12 77.0 124 47.6
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 3.4e-12 77.0 124 47.6
Dinv40895 Davidia involucrata HOM05D003810 ORTHO05D004416 4.5e-12 76.6 177 38.4
Hund02996 Selenicereus undatus HOM05D004019 ORTHO05D005136 1.0e-11 75.5 119 46.2
Actinidia31247 Actinidia chinensis HOM05D004019 ORTHO05D005136 3.8e-11 73.6 59 71.2
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 3.8e-11 73.6 123 42.3
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 3.8e-11 73.6 124 46.0
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 5.0e-11 73.2 124 46.8
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 5.0e-11 73.2 124 46.0
GSVIVG01014785001 Vitis vinifera HOM05D003810 ORTHO05D004416 8.4e-11 72.4 176 35.8
Lj3C711T10 Lonicera japonica HOM05D003810 ORTHO05D004416 2.5e-10 70.9 181 37.0
vmacro09609 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.2e-10 70.5 136 39.7
vmacro22299 Vaccinium macrocarpon HOM05D003810 ORTHO05D004416 3.2e-10 70.5 136 39.7
AUR62038490 Chenopodium quinoa HOM05D004019 ORTHO05D005136 4.2e-10 70.1 93 49.5
Hma1.2p1_0193F.1_g084130 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 9.3e-10 68.9 184 35.3
Dinv10375 Davidia involucrata HOM05D003810 ORTHO05D004416 3.5e-09 67.0 221 33.0
Hma1.2p1_2995F.1_g331440 Hydrangea macrophylla HOM05D003810 ORTHO05D004416 1.3e-08 65.1 183 35.0
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 1.8e-08 64.7 58 60.3
TAR629G3163 Trochodendron aralioides HOM05D003810 ORTHO05D004416 1.8e-08 64.7 170 34.7
SGA_v2.0_scaffold146G36126 Striga asiatica HOM05D003810 ORTHO05D004416 3.0e-08 63.9 173 33.5
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 3.9e-08 63.5 58 62.1
Cc00_g20590 Coffea canephora HOM05D003810 ORTHO05D004416 1.5e-07 61.6 177 32.2
PSO063G0853 Papaver somniferum HOM05D003810 ORTHO05D004416 1.9e-07 61.2 209 32.5
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 2.5e-07 60.8 98 42.9
SEGI_05898 Sequoiadendron giganteum HOM05D004019 ORTHO05D005136 2.5e-07 60.8 58 56.9
PSO782G5597 Papaver somniferum HOM05D003810 ORTHO05D004416 3.3e-07 60.5 209 32.5
DCAR_017597 Daucus carota HOM05D003810 ORTHO05D004416 5.7e-07 59.7 221 31.2
CDE10G0547 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 7.4e-07 59.3 118 38.1
CsaV3_4G027560 Cucumis sativus L. HOM05D003810 ORTHO05D004416 7.4e-07 59.3 170 32.9
HanXRQChr05g0160211 Helianthus annuus HOM05D003810 ORTHO05D004416 7.4e-07 59.3 176 33.0
ECA246G2898 Erigeron canadensis HOM05D003810 ORTHO05D004416 9.7e-07 58.9 197 29.9
Medtr1g090110 Medicago truncatula HOM05D003810 ORTHO05D004416 9.7e-07 58.9 171 31.0
MBI15_g00877_MAGBIO Magnolia biondii HOM05D003810 ORTHO05D004416 1.3e-06 58.5 134 37.3
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 1.3e-06 58.5 59 54.2
Thecc.09G267400 Theobroma cacao HOM05D003810 ORTHO05D004416 1.6e-06 58.2 175 34.3
Nn2g14662 Nelumbo nucifera HOM05D003810 ORTHO05D004416 2.2e-06 57.8 177 34.5
CDE04G2581 Ceratophyllum demersum HOM05D003810 ORTHO05D004416 3.7e-06 57.0 216 31.9
ClCG04G003010 Citrullus lanatus HOM05D003810 ORTHO05D004416 3.7e-06 57.0 170 32.4
Sed0019869 Sechium edule HOM05D003810 ORTHO05D004416 3.7e-06 57.0 101 39.6
MSTRG.13036 Avicennia marina HOM05D003810 ORTHO05D004416 6.3e-06 56.2 177 36.2
COL.COLO4_25217 Corchorus olitorius HOM05D003810 ORTHO05D004416 6.3e-06 56.2 182 31.9
Duzib150G1314 Durio zibethinus HOM05D003810 ORTHO05D004416 6.3e-06 56.2 183 30.6
Actinidia37012 Actinidia chinensis HOM05D000802 ORTHO05D001074 8.2e-06 55.8 128 36.7


User provided reference genes

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