Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia36094 Actinidia chinensis HOM05D005169 ORTHO05D006436 9.3e-121 436.8 208 100.0
Dinv33480 Davidia involucrata HOM05D005169 ORTHO05D006436 1.3e-53 213.8 175 65.7
vmacro05837 Vaccinium macrocarpon HOM05D005169 ORTHO05D006436 1.7e-50 203.4 176 64.8
Dinv35078 Davidia involucrata HOM05D005169 ORTHO05D006436 2.5e-49 199.5 174 62.1
CSS0037801 Camellia sinensis var. sinensis HOM05D005169 ORTHO05D006436 3.1e-47 192.6 166 65.1
Haze_14687 Corylus avellana HOM05D005169 ORTHO05D006436 6.4e-45 184.9 180 56.1
Cfa007415 Carpinus fangiana HOM05D005169 ORTHO05D006436 3.2e-44 182.6 175 56.6
Rhsim10G0020400 Rhododendron simsii HOM05D005169 ORTHO05D006256 7.0e-44 181.4 172 60.5
CiPaw.03G039400 Carya illinoinensis HOM05D005169 ORTHO05D006436 2.7e-43 179.5 174 55.2
TAR622G1423 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.5e-41 173.7 170 54.1
COL.COLO4_28998 Corchorus olitorius HOM05D005169 ORTHO05D006436 6.2e-40 168.3 189 50.3
TAR629G1679 Trochodendron aralioides HOM05D005169 ORTHO05D006436 1.4e-39 167.2 172 51.7
Lju41C36T6 Lonicera japonica HOM05D005169 ORTHO05D006436 1.5e-38 163.7 180 52.8
Gorai.006G030600 Gossypium raimondii HOM05D005169 ORTHO05D006436 4.4e-38 162.2 157 56.1
Potri.001G349700 Populus trichocarpa HOM05D005169 ORTHO05D006436 1.3e-37 160.6 178 47.8
Gohir.D09G026600 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.7e-37 160.2 157 56.1
QL02p075994 Quercus lobata HOM05D005169 ORTHO05D006436 2.9e-37 159.5 190 52.6
MELO3C021551.2 Cucumis melo HOM05D005169 ORTHO05D006436 1.9e-36 156.8 137 60.6
Hma1.2p1_0858F.1_g229310 Hydrangea macrophylla HOM05D005169 ORTHO05D006436 1.9e-36 156.8 181 50.3
Gohir.A09G026900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 2.4e-36 156.4 147 56.5
CsaV3_5G027330 Cucumis sativus L. HOM05D005169 ORTHO05D005030 4.1e-36 155.6 137 59.9
ClCG09G019030 Citrullus lanatus HOM05D005169 ORTHO05D006436 1.2e-35 154.1 139 59.7
Cc07_g02080 Coffea canephora HOM05D005169 ORTHO05D006436 1.3e-34 150.6 176 53.4
Nitab4.5_0002416g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.7e-34 150.2 157 49.7
Prupe.3G286300 Prunus persica HOM05D005169 ORTHO05D006436 1.7e-34 150.2 157 47.1
MD17G1033200 Malus domestica HOM05D005169 ORTHO05D006436 5.1e-34 148.7 148 53.4
Thecc.04G011300 Theobroma cacao HOM05D005169 ORTHO05D006436 5.1e-34 148.7 163 53.4
Nitab4.5_0002306g0060 Nicotiana tabacum HOM05D005169 ORTHO05D006436 1.1e-33 147.5 153 49.7
Psat1g056600 Pisum sativum HOM05D005169 ORTHO05D006436 5.6e-33 145.2 144 49.3
Peaxi162Scf00700g00522 Petunia axillaris HOM05D005169 ORTHO05D006436 7.3e-33 144.8 145 52.4
THA.LOC104821080 Tarenaya hassleriana HOM05D005169 ORTHO05D006436 7.3e-33 144.8 167 49.7
Gohir.A11G067000 Gossypium hirsutum HOM05D005169 ORTHO05D006436 1.2e-32 144.1 134 56.7
Sabra16G0229100 Salix brachista HOM05D005169 ORTHO05D006436 1.2e-32 144.1 174 48.3
Medtr6g406210 Medicago truncatula HOM05D005169 ORTHO05D006436 1.6e-32 143.7 145 50.3
Oeu014861.1 Olea europaea HOM05D005169 ORTHO05D006436 2.8e-32 142.9 130 56.2
Gohir.D11G070900 Gossypium hirsutum HOM05D005169 ORTHO05D006436 3.6e-32 142.5 133 56.4
Gorai.007G076200 Gossypium raimondii HOM05D005169 ORTHO05D006436 3.6e-32 142.5 133 56.4
TWI56G0416 Tripterygium wilfordii HOM05D005169 ORTHO05D006436 3.6e-32 142.5 157 52.9
Sed0004184 Sechium edule HOM05D005169 ORTHO05D006436 4.7e-32 142.1 147 53.1
Atru.chr6.2317 Acer truncatum HOM05D005169 ORTHO05D006256 1.1e-31 141.0 159 51.6
HanXRQChr07g0198841 Helianthus annuus HOM05D005169 ORTHO05D006436 1.4e-31 140.6 133 57.1
Nn3g16854 Nelumbo nucifera HOM05D005169 ORTHO05D006436 1.8e-31 140.2 178 48.9
Lsat_1_v5_gn_4_182740 Lactuca sativa HOM05D005169 ORTHO05D006436 3.1e-31 139.4 151 53.0
Peaxi162Scf00129g00124 Petunia axillaris HOM05D005169 ORTHO05D006436 1.2e-30 137.5 164 50.0
Solyc12g062840.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.6e-30 136.3 137 52.6
HanXRQChr09g0266101 Helianthus annuus HOM05D005169 ORTHO05D006436 3.4e-30 136.0 146 52.7
Psat1g056720 Pisum sativum HOM05D005169 ORTHO05D006436 5.8e-30 135.2 147 46.3
MSTRG.3296 Avicennia marina HOM05D005169 ORTHO05D006436 7.6e-30 134.8 164 47.0
C09p62450 Brassica napus HOM05D005169 ORTHO05D006436 7.6e-30 134.8 175 45.1
ECA232G1653 Erigeron canadensis HOM05D005169 ORTHO05D006436 7.6e-30 134.8 128 51.6
Manes.15G165700 Manihot esculenta HOM05D005169 ORTHO05D006436 7.6e-30 134.8 152 51.3
PSO017G2305 Papaver somniferum HOM05D005169 ORTHO05D006436 7.6e-30 134.8 165 46.7
Lsat_1_v5_gn_2_91781 Lactuca sativa HOM05D005169 ORTHO05D006436 1.3e-29 134.0 134 54.5
PGSC0003DMG400000520 Solanum tuberosum HOM05D005169 ORTHO05D006436 2.2e-29 133.3 168 47.0
CARHR075420 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.4e-29 131.3 178 44.9
PGR142G3938 Punica granatum HOM05D005169 ORTHO05D006436 1.4e-28 130.6 153 51.6
BraA10t44462Z Brassica rapa HOM05D005169 ORTHO05D006436 1.9e-28 130.2 196 42.3
FAN09G4345 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.9e-28 130.2 171 45.0
Oeu062928.1 Olea europaea HOM05D005169 ORTHO05D006436 1.9e-28 130.2 163 50.3
MBI16_g27097_MAGBIO Magnolia biondii HOM05D005169 ORTHO05D006436 2.4e-28 129.8 140 49.3
BolC9t59083H Brassica oleracea HOM05D005169 ORTHO05D006436 3.2e-28 129.4 195 41.5
AT3G01516 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 4.2e-28 129.0 179 43.6
PSO478G0492 Papaver somniferum HOM05D005169 ORTHO05D006436 5.4e-28 128.6 211 39.8
A10p23980 Brassica napus HOM05D005169 ORTHO05D006436 7.1e-28 128.3 196 42.3
Lalb_Chr06g0175951 Lupinus albus HOM05D005169 ORTHO05D006436 7.1e-28 128.3 147 50.3
Ciclev10016934m.g Citrus clementina HOM05D005169 ORTHO05D006436 9.2e-28 127.9 135 51.9
SGA_v2.0_scaffold135G34886 Striga asiatica HOM05D005169 ORTHO05D006436 1.2e-27 127.5 130 52.3
Aa31LG5G10650 Aethionema arabicum HOM05D005169 ORTHO05D006436 1.6e-27 127.1 115 60.0
Oeu043043.1 Olea europaea HOM05D005169 ORTHO05D006436 1.6e-27 127.1 161 48.4
Solyc02g086760.1 Solanum lycopersicum HOM05D005169 ORTHO05D006436 2.1e-27 126.7 180 43.9
Sopen02g031520 Solanum pennellii HOM05D005169 ORTHO05D006436 2.1e-27 126.7 173 44.5
Migut.K01374 Erythranthe guttata HOM05D005169 ORTHO05D006436 3.5e-27 125.9 133 50.4
Thhalv10021959m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 3.5e-27 125.9 182 41.8
Lalb_Chr21g0319501 Lupinus albus HOM05D005169 ORTHO05D006436 4.6e-27 125.6 144 47.9
Migut.H00106 Erythranthe guttata HOM05D005169 ORTHO05D006436 6.0e-27 125.2 142 52.1
AL3G10640 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 7.8e-27 124.8 176 42.0
SGA_v2.0_scaffold30G12455 Striga asiatica HOM05D005169 ORTHO05D006436 7.8e-27 124.8 145 51.0
CANSAT64G1588 Cannabis sativa HOM05D005169 ORTHO05D006436 3.0e-26 122.9 140 51.4
C09p75080 Brassica napus HOM05D005169 ORTHO05D006436 3.9e-26 122.5 188 43.1
BolC5t35156H Brassica oleracea HOM05D005169 ORTHO05D006436 3.9e-26 122.5 188 43.1
FAN14G0546 Fragaria x ananassa HOM05D005169 ORTHO05D006436 3.9e-26 122.5 160 43.1
SHI27192 Sapria himalayana HOM05D005169 ORTHO05D006436 3.9e-26 122.5 140 47.1
Carub.0003s0056 Capsella rubella HOM05D005169 ORTHO05D006436 6.6e-26 121.7 176 43.8
CARHR198620 Cardamine hirsuta HOM05D005169 ORTHO05D006436 8.7e-26 121.3 173 42.2
BcaC05g30410 Brassica carinata HOM05D005169 ORTHO05D006436 1.1e-25 120.9 188 42.6
AUR62023410 Chenopodium quinoa HOM05D005169 ORTHO05D006436 1.1e-25 120.9 171 44.4
TPR.G35382 Trifolium pratense HOM05D005169 ORTHO05D006436 1.1e-25 120.9 112 52.7
RcHm_v2.0_Chr2g0172251 Rosa chinensis HOM05D005169 ORTHO05D006436 1.9e-25 120.2 152 46.7
AUR62013741 Chenopodium quinoa HOM05D005169 ORTHO05D006436 2.5e-25 119.8 172 44.8
FAN05G4915 Fragaria x ananassa HOM05D005169 ORTHO05D006436 2.5e-25 119.8 127 48.8
FvH4_6g50860 Fragaria vesca HOM05D005169 ORTHO05D006436 4.3e-25 119.0 178 40.4
A05p44490 Brassica napus HOM05D005169 ORTHO05D006436 5.6e-25 118.6 188 40.4
BraA05t23207Z Brassica rapa HOM05D005169 ORTHO05D006436 5.6e-25 118.6 188 40.4
Nitab4.5_0014517g0010 Nicotiana tabacum HOM05D005169 ORTHO05D006436 5.6e-25 118.6 161 44.7
EL10Ac1g00764 Beta vulgaris HOM05D005169 ORTHO05D006436 7.3e-25 118.2 147 47.6
Sp3g00540 Schrenkiella parvula HOM05D005169 ORTHO05D006436 7.3e-25 118.2 178 42.7
FAN05G3636 Fragaria x ananassa HOM05D005169 ORTHO05D006436 1.2e-24 117.5 159 44.0
PSO170G4554 Papaver somniferum HOM05D005169 ORTHO05D006436 1.2e-24 117.5 198 39.4
Glyma.05G006400 Glycine max HOM05D005169 ORTHO05D006436 3.6e-24 115.9 131 43.5
SalBow7G2461 Salvia bowleyana HOM05D005169 ORTHO05D006436 3.6e-24 115.9 134 50.0
Sp6g29350 Schrenkiella parvula HOM05D005169 ORTHO05D006436 3.6e-24 115.9 215 36.3
BcaC03g13455 Brassica carinata HOM05D005169 ORTHO05D006436 3.1e-23 112.8 139 46.8
DCAR_015051 Daucus carota HOM05D005169 ORTHO05D006436 3.1e-23 112.8 152 44.1
BcaC05g30449 Brassica carinata HOM05D005169 ORTHO05D006436 4.0e-23 112.5 188 41.0
Glyma.19G006800 Glycine max HOM05D005169 ORTHO05D006436 6.9e-23 111.7 162 40.1
Ah.05g173110 Amaranthus hybridus HOM05D005169 ORTHO05D006436 9.0e-23 111.3 158 43.0
AL6G25460 Arabidopsis lyrata HOM05D005169 ORTHO05D006436 2.0e-22 110.2 209 36.4
PSO144G0121 Papaver somniferum HOM05D005169 ORTHO05D006436 3.4e-22 109.4 198 37.9
Sc16g0007930 Simmondsia chinensis HOM05D005169 ORTHO05D006436 5.8e-22 108.6 129 46.5
TPR.G10806 Trifolium pratense HOM05D005169 ORTHO05D006436 5.8e-22 108.6 96 58.3
Cpa.g.sc3104.1 Carica papaya HOM05D005169 ORTHO05D006436 1.7e-21 107.1 132 50.8
Carub.0006s1286 Capsella rubella HOM05D005169 ORTHO05D006436 2.4e-20 103.2 224 33.0
BcaNung03104 Brassica carinata HOM05D005169 ORTHO05D006436 7.1e-20 101.7 211 35.1
Sopen12g026520 Solanum pennellii HOM05D005169 ORTHO05D006436 7.1e-20 101.7 119 47.9
ATR0730G202 Amborella trichopoda HOM05D005169 ORTHO05D006436 1.2e-19 100.9 122 47.5
DCAR_021693 Daucus carota HOM05D005169 ORTHO05D006436 2.7e-19 99.8 121 46.3
AT5G14690 Arabidopsis thaliana HOM05D005169 ORTHO05D006436 6.0e-19 98.6 215 31.6
BraA02t05235Z Brassica rapa HOM05D005169 ORTHO05D006436 1.7e-18 97.1 170 37.6
Thhalv10014646m.g Eutrema salsugineum HOM05D005169 ORTHO05D006436 1.7e-18 97.1 213 32.4
Duzib147G0144 Durio zibethinus HOM05D005169 ORTHO05D006436 2.3e-18 96.7 118 48.3
Aa31LG11G14770 Aethionema arabicum HOM05D005169 ORTHO05D006436 2.5e-17 93.2 196 34.7
Os01g0638800 Oryza sativa ssp. japonica HOM05D005169 ORTHO05D006436 1.4e-15 87.4 140 38.6
HPP92_024720 Vanilla planifolia HOM05D005169 ORTHO05D006436 5.3e-15 85.5 125 41.6
CDE07G0703 Ceratophyllum demersum HOM05D005169 ORTHO05D006436 4.5e-14 82.4 110 40.9
Ah.03g141220 Amaranthus hybridus HOM05D005169 ORTHO05D006436 1.3e-13 80.9 74 54.1
unitig_899.g15487 Utricularia gibba HOM05D005169 ORTHO05D006436 1.3e-13 80.9 127 38.6
MD09G1031300 Malus domestica HOM05D005169 ORTHO05D006436 2.2e-13 80.1 98 45.9
Zm00001eb157680 Zea mays HOM05D005169 ORTHO05D006436 2.9e-13 79.7 159 36.5
HPP92_008039 Vanilla planifolia HOM05D005169 ORTHO05D006436 1.9e-12 77.0 159 35.8
SEGI_19138 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 9.3e-12 74.7 179 32.4
SEGI_21704 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 9.3e-12 74.7 172 32.6
C02p07220 Brassica napus HOM05D005169 ORTHO05D006436 2.7e-11 73.2 76 50.0
BolC2t06654H Brassica oleracea HOM05D005169 ORTHO05D006436 2.7e-11 73.2 76 50.0
Zm00001eb296260 Zea mays HOM05D005169 ORTHO05D006436 3.5e-11 72.8 127 39.4
BcaC08g44071 Brassica carinata HOM05D005169 ORTHO05D006436 7.4e-09 65.1 53 58.5
VMungo0464G1178 Vigna mungo HOM05D005169 ORTHO05D006436 7.4e-09 65.1 139 32.4
BcaC04g22405 Brassica carinata HOM05D005169 ORTHO05D006436 9.6e-09 64.7 53 58.5
C09p19720 Brassica napus HOM05D005169 ORTHO05D006436 9.6e-09 64.7 53 58.5
arahy.Tifrunner.gnm1.ann1.SA5TEJ Arachis hypogaea HOM05D005169 ORTHO05D006436 4.8e-08 62.4 156 28.8
SEGI_22807 Sequoiadendron giganteum HOM05D005169 ORTHO05D006436 4.8e-08 62.4 125 28.0
arahy.Tifrunner.gnm1.ann1.HH7AL9 Arachis hypogaea HOM05D005169 ORTHO05D006436 2.4e-07 60.1 159 28.9
Phvul.004G012300 Phaseolus vulgaris HOM05D005169 ORTHO05D006436 3.1e-07 59.7 126 32.5
CDE06G1771 Ceratophyllum demersum HOM05D000110 ORTHO05D000024 3.4e-06 56.2 50 56.0


User provided reference genes

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