Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia34706 Actinidia chinensis HOM05D006840 ORTHO05D008588 6.9e-72 273.9 138 100.0
Actinidia31085 Actinidia chinensis HOM05D006840 ORTHO05D008588 1.7e-30 136.3 122 65.6
Rhsim06G0181200 Rhododendron simsii HOM05D006840 ORTHO05D008588 6.8e-27 124.4 122 59.0
GSVIVG01019072001 Vitis vinifera HOM05D006840 ORTHO05D008588 2.0e-26 122.9 122 57.4
Nn7g37259 Nelumbo nucifera HOM05D006840 ORTHO05D008588 2.6e-26 122.5 122 56.6
CSS0048734 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 4.4e-26 121.7 122 55.7
MD04G1245900 Malus domestica HOM05D006840 ORTHO05D008588 5.7e-26 121.3 122 57.4
Oeu020467.1 Olea europaea HOM05D006840 ORTHO05D008588 9.8e-26 120.6 122 56.6
MBI07_g00615_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 1.7e-25 119.8 135 52.6
Eucgr.B01421 Eucalyptus grandis HOM05D006840 ORTHO05D008588 2.2e-25 119.4 122 54.9
CSS0032443 Camellia sinensis var. sinensis HOM05D006840 ORTHO05D008588 2.9e-25 119.0 122 54.9
Gohir.D08G247000 Gossypium hirsutum HOM05D006840 ORTHO05D008588 2.9e-25 119.0 122 54.9
Gorai.004G263500 Gossypium raimondii HOM05D006840 ORTHO05D008588 2.9e-25 119.0 122 54.9
MD12G1264100 Malus domestica HOM05D006840 ORTHO05D008588 2.9e-25 119.0 122 54.9
QL01p049413 Quercus lobata HOM05D006840 ORTHO05D008588 2.9e-25 119.0 121 55.4
Duzib106G1767 Durio zibethinus HOM05D006840 ORTHO05D008588 3.7e-25 118.6 122 53.3
Potri.013G085300 Populus trichocarpa HOM05D006840 ORTHO05D008588 4.9e-25 118.2 122 54.9
Manes.13G004800 Manihot esculenta HOM05D006840 ORTHO05D008588 6.3e-25 117.9 122 54.9
arahy.Tifrunner.gnm1.ann1.1ED5VS Arachis hypogaea HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 54.1
arahy.Tifrunner.gnm1.ann1.SXK3FV Arachis hypogaea HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 54.1
AUR62000298 Chenopodium quinoa HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 55.7
AUR62006644 Chenopodium quinoa HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 55.7
Cc09_g03780 Coffea canephora HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 55.7
Gohir.A08G226600 Gossypium hirsutum HOM05D006840 ORTHO05D008588 8.3e-25 117.5 122 54.1
Prupe.6G362300 Prunus persica HOM05D006840 ORTHO05D008588 1.1e-24 117.1 122 54.1
Sabra13G0078300 Salix brachista HOM05D006840 ORTHO05D008588 1.1e-24 117.1 122 54.1
Ciclev10013335m.g Citrus clementina HOM05D006840 ORTHO05D008588 1.4e-24 116.7 122 54.9
Lj1g0027213 Lotus japonicus HOM05D006840 ORTHO05D008588 1.8e-24 116.3 122 52.5
SGA_v2.0_scaffold62G21495 Striga asiatica HOM05D006840 ORTHO05D008588 1.8e-24 116.3 122 53.3
DCAR_028385 Daucus carota HOM05D006840 ORTHO05D008588 3.2e-24 115.5 122 54.9
Glyma.18G243000 Glycine max HOM05D006840 ORTHO05D008588 3.2e-24 115.5 122 54.1
Lj1A575G23 Lonicera japonica HOM05D006840 ORTHO05D008588 3.2e-24 115.5 129 55.8
RcHm_v2.0_Chr3g0447741 Rosa chinensis HOM05D006840 ORTHO05D008588 5.4e-24 114.8 122 53.3
PGR119G2059 Punica granatum HOM05D006840 ORTHO05D008588 7.0e-24 114.4 122 54.1
Atru.BG.274.p Acer truncatum HOM05D006840 ORTHO05D008588 9.2e-24 114.0 121 53.7
CiPaw.08G114500 Carya illinoinensis HOM05D006840 ORTHO05D008588 9.2e-24 114.0 122 51.6
Migut.F02113 Erythranthe guttata HOM05D006840 ORTHO05D008588 9.2e-24 114.0 122 54.1
FvH4_6g00410 Fragaria vesca HOM05D006840 ORTHO05D008588 9.2e-24 114.0 120 54.2
FAN09G3232 Fragaria x ananassa HOM05D006840 ORTHO05D008588 9.2e-24 114.0 120 54.2
Phvul.008G053500 Phaseolus vulgaris HOM05D006840 ORTHO05D008588 1.2e-23 113.6 122 53.3
Glyma.09G249400 Glycine max HOM05D006840 ORTHO05D008588 1.6e-23 113.2 122 53.3
CsaV3_1G044150 Cucumis sativus L. HOM05D006840 ORTHO05D008588 2.0e-23 112.8 122 54.1
PSO357G0633 Papaver somniferum HOM05D006840 ORTHO05D008588 2.0e-23 112.8 122 53.3
EL10Ac4g09995 Beta vulgaris HOM05D006840 ORTHO05D008588 3.5e-23 112.1 122 52.5
MELO3C010008.2 Cucumis melo HOM05D006840 ORTHO05D008588 4.6e-23 111.7 122 53.3
Peaxi162Scf00529g00710 Petunia axillaris HOM05D006840 ORTHO05D008588 5.9e-23 111.3 122 52.5
PSO170G0121 Papaver somniferum HOM05D006840 ORTHO05D008588 1.0e-22 110.5 122 51.6
TWI36G0520 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.0e-22 110.5 122 51.6
TWI75G0198 Tripterygium wilfordii HOM05D006840 ORTHO05D008588 1.0e-22 110.5 122 52.5
Lalb_Chr03g0038681 Lupinus albus HOM05D006840 ORTHO05D008588 1.3e-22 110.2 120 51.7
Nitab4.5_0009290g0020 Nicotiana tabacum HOM05D006840 ORTHO05D008588 1.7e-22 109.8 122 51.6
VMungo1383G2163 Vigna mungo HOM05D006840 ORTHO05D008588 2.3e-22 109.4 121 52.1
Nitab4.5_0000083g0050 Nicotiana tabacum HOM05D006840 ORTHO05D008588 2.9e-22 109.0 122 50.8
Sc06g0005020 Simmondsia chinensis HOM05D006840 ORTHO05D008588 2.9e-22 109.0 127 48.0
Sed0002286 Sechium edule HOM05D006840 ORTHO05D008588 3.9e-22 108.6 122 51.6
Hund21908 Selenicereus undatus HOM05D006840 ORTHO05D008588 3.9e-22 108.6 122 51.6
Sopen04g025500 Solanum pennellii HOM05D006840 ORTHO05D008588 3.9e-22 108.6 122 52.5
Solyc04g056580.3 Solanum lycopersicum HOM05D006840 ORTHO05D008588 5.0e-22 108.2 122 51.6
MSTRG.27397 Avicennia marina HOM05D006840 ORTHO05D008588 1.1e-21 107.1 122 52.5
CAN.G642.5 Capsicum annuum HOM05D006840 ORTHO05D008588 1.1e-21 107.1 122 50.8
vmacro12041 Vaccinium macrocarpon HOM05D006840 ORTHO05D008588 1.5e-21 106.7 134 51.5
Lsat_1_v5_gn_0_18400 Lactuca sativa HOM05D006840 ORTHO05D008588 1.9e-21 106.3 122 50.0
CANSAT54G1191 Cannabis sativa HOM05D006840 ORTHO05D008588 2.5e-21 105.9 122 47.5
Cpa.g.sc39.39 Carica papaya HOM05D006840 ORTHO05D008588 2.5e-21 105.9 117 52.1
Psat3g102720 Pisum sativum HOM05D006840 ORTHO05D008588 2.5e-21 105.9 122 50.8
PGSC0003DMG400010521 Solanum tuberosum HOM05D006840 ORTHO05D008588 2.5e-21 105.9 122 50.8
HanXRQChr15g0492181 Helianthus annuus HOM05D006840 ORTHO05D008588 3.3e-21 105.5 122 51.6
ECA232G2794 Erigeron canadensis HOM05D006840 ORTHO05D008588 7.3e-21 104.4 122 48.4
TPR.G23771 Trifolium pratense HOM05D006840 ORTHO05D008588 9.5e-21 104.0 122 50.0
HanXRQChr15g0491491 Helianthus annuus HOM05D006840 ORTHO05D008588 1.6e-20 103.2 122 50.0
Thhalv10018969m.g Eutrema salsugineum HOM05D006840 ORTHO05D008588 2.8e-20 102.4 121 47.9
Carub.0002s1076 Capsella rubella HOM05D006840 ORTHO05D008588 3.6e-20 102.1 121 48.8
AL2G20230 Arabidopsis lyrata HOM05D006840 ORTHO05D008588 4.7e-20 101.7 121 47.9
BcaC03g14685 Brassica carinata HOM05D006840 ORTHO05D008588 6.1e-20 101.3 121 47.9
A02p13110 Brassica napus HOM05D006840 ORTHO05D008588 6.1e-20 101.3 121 47.9
BraA02t06367Z Brassica rapa HOM05D006840 ORTHO05D008588 6.1e-20 101.3 121 47.9
HPP92_000447 Vanilla planifolia HOM05D006840 ORTHO05D008588 1.4e-19 100.1 122 48.4
ClCG03G011690 Citrullus lanatus HOM05D006840 ORTHO05D008588 1.8e-19 99.8 145 45.5
Medtr7g080220 Medicago truncatula HOM05D006840 ORTHO05D008588 1.8e-19 99.8 123 48.0
Aa31LG2G2360 Aethionema arabicum HOM05D006840 ORTHO05D008588 2.3e-19 99.4 121 47.9
Sp5g19910 Schrenkiella parvula HOM05D006840 ORTHO05D008588 2.3e-19 99.4 121 47.9
BcaB05g24097 Brassica carinata HOM05D006840 ORTHO05D008588 3.1e-19 99.0 121 47.1
CARHR056840 Cardamine hirsuta HOM05D006840 ORTHO05D008588 3.1e-19 99.0 122 47.5
Os01g0912700 Oryza sativa ssp. japonica HOM05D006840 ORTHO05D008588 3.1e-19 99.0 124 49.2
C02p21250 Brassica napus HOM05D006840 ORTHO05D008588 4.0e-19 98.6 121 47.1
BolC2t08265H Brassica oleracea HOM05D006840 ORTHO05D008588 4.0e-19 98.6 121 47.1
AT1G65230 Arabidopsis thaliana HOM05D006840 ORTHO05D008588 6.8e-19 97.8 121 46.3
ATR0215G001 Amborella trichopoda HOM05D006840 ORTHO05D008588 8.9e-19 97.4 114 49.1
THA.LOC104821923 Tarenaya hassleriana HOM05D006840 ORTHO05D008588 1.2e-18 97.1 121 47.9
Lj1A595G27 Lonicera japonica HOM05D006840 ORTHO05D008588 6.4e-17 91.3 157 42.7
Zm00001eb365000 Zea mays HOM05D006840 ORTHO05D008588 6.4e-17 91.3 125 46.4
SalBow1G4059 Salvia bowleyana HOM05D006840 ORTHO05D008588 1.1e-16 90.5 110 47.3
SEGI_09257 Sequoiadendron giganteum HOM05D006840 ORTHO05D008588 1.1e-16 90.5 120 45.0
unitig_22.g5732 Utricularia gibba HOM05D006840 ORTHO05D008588 4.1e-16 88.6 123 47.2
Aqoxy5G00025 Aquilegia oxysepala HOM05D006840 ORTHO05D008588 5.6e-13 78.2 41 90.2
Dinv29090 Davidia involucrata HOM05D006840 ORTHO05D008588 1.2e-12 77.0 41 90.2
SMO353G0271 Selaginella moellendorffii HOM05D006840 ORTHO05D008588 1.2e-12 77.0 120 42.5
Pp3c9_3810 Physcomitrium patens HOM05D006840 ORTHO05D008588 8.1e-12 74.3 122 38.5
Mapoly0031s0189 Marchantia polymorpha HOM05D006840 ORTHO05D008588 3.1e-11 72.4 134 38.1
Thecc.05G192600 Theobroma cacao HOM05D006840 ORTHO05D008588 3.1e-11 72.4 41 80.5
MBI19_g03256_MAGBIO Magnolia biondii HOM05D006840 ORTHO05D008588 5.2e-11 71.6 41 85.4
Cfa006254 Carpinus fangiana HOM05D006840 ORTHO05D008588 1.2e-10 70.5 41 78.0
Haze_04572 Corylus avellana HOM05D006840 ORTHO05D008588 1.2e-10 70.5 41 78.0
FAN02G1048 Fragaria x ananassa HOM05D006840 ORTHO05D008588 1.5e-10 70.1 39 84.6
FAN05G5535 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.4e-10 68.9 39 82.1
FAN14G4782 Fragaria x ananassa HOM05D006840 ORTHO05D008588 3.4e-10 68.9 39 82.1
Ca_07995_v3 Cicer arietinum L. HOM05D006840 ORTHO05D008588 5.8e-10 68.2 41 73.2
CDE02G0188 Ceratophyllum demersum HOM05D006840 ORTHO05D008588 3.7e-09 65.5 39 79.5
AagrBONN_evm.TU.Sc2ySwM_228.2548 Anthoceros agrestis HOM05D006840 ORTHO05D008588 4.6e-07 58.5 121 36.4
CBR_g8822 Chara braunii HOM05D006840 ORTHO05D008588 8.6e-06 54.3 41 56.1


User provided reference genes

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