Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia32089 Actinidia chinensis HOM05D005996 ORTHO05D007507 0.0e+00 1663.7 1113 100.0
Dinv04976 Davidia involucrata HOM05D005996 ORTHO05D007507 1.6e-280 969.9 1139 67.1
Rhsim05G0064300 Rhododendron simsii HOM05D005996 ORTHO05D007507 3.8e-261 905.6 1195 61.2
vmacro17393 Vaccinium macrocarpon HOM05D005996 ORTHO05D007507 1.8e-250 870.2 1199 60.3
Dinv41983 Davidia involucrata HOM05D005996 ORTHO05D007507 1.0e-245 854.4 1050 69.9
GSVIVG01024119001 Vitis vinifera HOM05D005996 ORTHO05D007507 2.8e-224 783.1 1062 64.5
QL11p046997 Quercus lobata HOM05D005996 ORTHO05D007507 3.5e-222 776.2 1123 63.0
Cfa005165 Carpinus fangiana HOM05D005996 ORTHO05D007507 8.8e-210 734.9 1122 61.1
Haze_02211 Corylus avellana HOM05D005996 ORTHO05D007507 2.0e-209 733.8 1169 59.5
CiPaw.06G125900 Carya illinoinensis HOM05D005996 ORTHO05D007507 1.7e-208 730.7 1143 54.7
TWI75G0427 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.2e-208 730.3 1120 60.6
Thecc.02G069400 Theobroma cacao HOM05D005996 ORTHO05D007507 3.1e-207 726.5 1070 62.4
Duzib052G0584 Durio zibethinus HOM05D005996 ORTHO05D007507 4.4e-201 706.1 1072 61.8
Cc02_g16690 Coffea canephora HOM05D005996 ORTHO05D007507 2.8e-195 686.8 1117 57.2
Sabra04G0111800 Salix brachista HOM05D005996 ORTHO05D007507 3.1e-194 683.3 1162 50.6
Potri.004G166600 Populus trichocarpa HOM05D005996 ORTHO05D007507 8.9e-194 681.8 1129 59.2
Oeu046116.1 Olea europaea HOM05D005996 ORTHO05D007507 9.5e-188 661.8 1119 55.5
Nitab4.5_0000283g0180 Nicotiana tabacum HOM05D005996 ORTHO05D007507 4.7e-187 659.4 1132 58.9
Manes.11G088413 Manihot esculenta HOM05D005996 ORTHO05D007507 1.4e-183 647.9 1129 54.7
Manes.11G088257 Manihot esculenta HOM05D005996 ORTHO05D007507 1.7e-181 641.0 1136 54.3
MD05G1113900 Malus domestica HOM05D005996 ORTHO05D007507 3.0e-181 640.2 1134 58.3
Cpa.g.sc37.207 Carica papaya HOM05D005996 ORTHO05D007507 3.9e-181 639.8 1124 52.7
CsaV3_2G015630 Cucumis sativus L. HOM05D005996 ORTHO05D007507 1.5e-180 637.9 1123 57.0
Nn5g29328 Nelumbo nucifera HOM05D005996 ORTHO05D007507 6.2e-179 632.5 1134 57.8
FvH4_2g02240 Fragaria vesca HOM05D005996 ORTHO05D007507 4.9e-176 622.9 1121 57.1
Peaxi162Scf00362g01048 Petunia axillaris HOM05D005996 ORTHO05D007507 2.4e-175 620.5 1125 57.7
Eucgr.I01366 Eucalyptus grandis HOM05D005996 ORTHO05D007507 2.1e-174 617.5 1139 52.0
DCAR_022928 Daucus carota HOM05D005996 ORTHO05D007507 2.7e-174 617.1 1141 55.5
RcHm_v2.0_Chr6g0245931 Rosa chinensis HOM05D005996 ORTHO05D007507 6.0e-174 615.9 1118 57.6
ClCG11G003680 Citrullus lanatus HOM05D005996 ORTHO05D007507 7.8e-174 615.5 1115 57.0
FAN24G2882 Fragaria x ananassa HOM05D005996 ORTHO05D007507 8.6e-173 612.1 1121 56.6
VMungo1127G0707 Vigna mungo HOM05D005996 ORTHO05D007507 1.5e-172 611.3 1136 55.5
Duzib248G0011 Durio zibethinus HOM05D005996 ORTHO05D007507 4.3e-172 609.8 1121 56.8
ECA234G3379 Erigeron canadensis HOM05D005996 ORTHO05D007507 4.3e-172 609.8 1095 57.0
MSTRG.16865 Avicennia marina HOM05D005996 ORTHO05D007507 3.6e-171 606.7 1133 57.5
Glyma.09G218800 Glycine max HOM05D005996 ORTHO05D007507 1.4e-170 604.7 1088 57.9
Glyma.12G033700 Glycine max HOM05D005996 ORTHO05D007507 3.1e-170 603.6 1092 57.5
CANSAT25G2790 Cannabis sativa HOM05D005996 ORTHO05D007507 5.2e-170 602.8 1125 57.8
Lsat_1_v5_gn_4_74240 Lactuca sativa HOM05D005996 ORTHO05D007507 2.0e-169 600.9 1118 56.7
Gohir.D13G094700 Gossypium hirsutum HOM05D005996 ORTHO05D007507 5.8e-169 599.4 1122 56.8
Gorai.001G246900 Gossypium raimondii HOM05D005996 ORTHO05D007507 6.4e-168 595.9 1122 56.7
COL.COLO4_17237 Corchorus olitorius HOM05D005996 ORTHO05D007507 1.9e-167 594.3 1033 58.9
Gohir.A13G098800 Gossypium hirsutum HOM05D005996 ORTHO05D007507 3.2e-167 593.6 1122 56.6
Lj5C186G10 Lonicera japonica HOM05D005996 ORTHO05D007507 5.4e-167 592.8 1091 57.7
Sed0010933 Sechium edule HOM05D005996 ORTHO05D007507 5.4e-167 592.8 1125 56.6
Atru.chr5.3202 Acer truncatum HOM05D005996 ORTHO05D007507 1.3e-163 581.6 1138 56.2
CAN.G588.14 Capsicum annuum HOM05D005996 ORTHO05D007507 1.8e-162 577.8 1130 56.0
Sc08g0001200 Simmondsia chinensis HOM05D005996 ORTHO05D007507 1.1e-159 568.5 1126 55.5
MELO3C020773.2 Cucumis melo HOM05D005996 ORTHO05D007507 4.2e-159 566.6 1124 55.8
arahy.Tifrunner.gnm1.ann1.YQYF3H Arachis hypogaea HOM05D005996 ORTHO05D007507 7.1e-159 565.8 1149 54.4
arahy.Tifrunner.gnm1.ann1.XDQA6W Arachis hypogaea HOM05D005996 ORTHO05D007507 1.0e-157 562.0 1150 54.3
Migut.B00160 Erythranthe guttata HOM05D005996 ORTHO05D007507 2.1e-155 554.3 1117 55.0
Prupe.8G158300 Prunus persica HOM05D005996 ORTHO05D007507 3.1e-154 550.4 1148 53.7
Phvul.011G036300 Phaseolus vulgaris HOM05D005996 ORTHO05D007507 1.6e-150 538.1 1134 53.4
Ah.01g018430 Amaranthus hybridus HOM05D005996 ORTHO05D007507 2.1e-150 537.7 830 61.4
PGR142G2892 Punica granatum HOM05D005996 ORTHO05D007507 2.7e-150 537.3 1134 53.8
Sed0023130 Sechium edule HOM05D005996 ORTHO05D007507 3.5e-150 537.0 1056 51.3
EL10Ac9g22244 Beta vulgaris HOM05D005996 ORTHO05D007507 1.8e-149 534.6 823 64.6
SGA_v2.0_scaffold58G20447 Striga asiatica HOM05D005996 ORTHO05D007507 8.7e-149 532.3 1147 50.0
Sp7g32590 Schrenkiella parvula HOM05D005996 ORTHO05D007507 3.3e-148 530.4 1121 54.0
PSO170G2255 Papaver somniferum HOM05D005996 ORTHO05D007507 4.3e-148 530.0 1146 52.7
Solyc01g111020.3 Solanum lycopersicum HOM05D005996 ORTHO05D007507 5.6e-148 529.6 1183 53.2
CSS0029020 Camellia sinensis var. sinensis HOM05D005996 ORTHO05D007507 7.4e-148 529.3 601 81.0
PSO700G0013 Papaver somniferum HOM05D005996 ORTHO05D007507 7.4e-148 529.3 1164 52.6
Lj3g0021328 Lotus japonicus HOM05D005996 ORTHO05D007507 1.3e-147 528.5 1096 55.1
Aqoxy5G01766 Aquilegia oxysepala HOM05D005996 ORTHO05D007507 4.8e-147 526.6 1130 55.0
AL7G16380 Arabidopsis lyrata HOM05D005996 ORTHO05D007507 1.8e-146 524.6 1139 53.8
FAN20G0865 Fragaria x ananassa HOM05D005996 ORTHO05D007507 9.0e-146 522.3 1122 53.7
AT4G34830 Arabidopsis thaliana HOM05D005996 ORTHO05D007507 1.2e-145 521.9 1133 53.6
FAN15G0761 Fragaria x ananassa HOM05D005996 ORTHO05D007507 5.8e-145 519.6 1125 53.8
BcaNung00650 Brassica carinata HOM05D005996 ORTHO05D007507 3.2e-143 513.8 826 65.0
FAN27G2880 Fragaria x ananassa HOM05D005996 ORTHO05D007507 7.1e-143 512.7 1122 54.1
Sopen01g053080 Solanum pennellii HOM05D005996 ORTHO05D007507 7.1e-143 512.7 1210 51.6
Ciclev10027915m.g Citrus clementina HOM05D005996 ORTHO05D007507 1.2e-142 511.9 715 73.4
Ca_19076_v3 Cicer arietinum L. HOM05D005996 ORTHO05D007507 8.7e-141 505.8 965 47.9
Hund06298 Selenicereus undatus HOM05D005996 ORTHO05D007507 8.7e-141 505.8 928 56.0
Medtr4g072990 Medicago truncatula HOM05D005996 ORTHO05D007507 1.1e-140 505.4 1140 52.8
Nitab4.5_0000980g0320 Nicotiana tabacum HOM05D005996 ORTHO05D007507 7.6e-137 492.7 1133 53.0
TPR.G39263 Trifolium pratense HOM05D005996 ORTHO05D007507 3.8e-136 490.3 1085 53.5
TAR628G0048 Trochodendron aralioides HOM05D005996 ORTHO05D007507 5.0e-136 490.0 742 58.0
HanXRQChr10g0296321 Helianthus annuus HOM05D005996 ORTHO05D007507 2.5e-135 487.6 1139 52.7
Lalb_Chr01g0001941 Lupinus albus HOM05D005996 ORTHO05D007507 3.0e-133 480.7 841 64.2
AUR62010338 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.7e-131 473.8 773 64.3
Psat7g180560 Pisum sativum HOM05D005996 ORTHO05D007507 4.2e-127 460.3 1045 54.2
Thhalv10024275m.g Eutrema salsugineum HOM05D005996 ORTHO05D007507 4.8e-123 446.8 1125 51.8
THA.LOC104807280 Tarenaya hassleriana HOM05D005996 ORTHO05D007507 1.5e-121 441.8 1130 50.5
BolC1t00389H Brassica oleracea HOM05D005996 ORTHO05D007507 7.7e-121 439.5 1157 49.7
C01p03970 Brassica napus HOM05D005996 ORTHO05D007507 1.0e-120 439.1 1102 50.8
Os10g0181200 Oryza sativa ssp. japonica HOM05D005996 ORTHO05D007507 1.0e-120 439.1 693 65.4
BraA01t00353Z Brassica rapa HOM05D005996 ORTHO05D007507 2.5e-119 434.5 1168 48.6
MBI09_g26149_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.2e-118 432.2 1016 54.4
A01p03690 Brassica napus HOM05D005996 ORTHO05D007507 1.8e-117 428.3 1174 49.0
ATR0955G004 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.6e-116 424.5 753 64.8
HPP92_022112 Vanilla planifolia HOM05D005996 ORTHO05D007507 4.4e-116 423.7 834 52.8
Carub.0007s0547 Capsella rubella HOM05D005996 ORTHO05D007507 5.7e-116 423.3 821 61.1
Aa31LG2G15710 Aethionema arabicum HOM05D005996 ORTHO05D007507 7.0e-114 416.4 1136 48.9
BcaNung04307 Brassica carinata HOM05D005996 ORTHO05D007507 1.4e-77 295.8 262 56.1
PGSC0003DMG400001599 Solanum tuberosum HOM05D005996 ORTHO05D007507 1.1e-66 259.6 760 44.6
TAR628G0092 Trochodendron aralioides HOM05D005996 ORTHO05D007507 2.5e-63 248.4 163 76.1
AUR62016883 Chenopodium quinoa HOM05D005996 ORTHO05D007507 3.6e-62 244.6 693 49.5
TWI75G0933 Tripterygium wilfordii HOM05D005996 ORTHO05D007507 2.2e-59 235.3 273 49.8
Hma1.2p1_0032F.1_g019730 Hydrangea macrophylla HOM05D005996 ORTHO05D007507 8.7e-56 223.4 271 85.6
CDE09G0530 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 5.1e-48 197.6 316 71.8
SMO340G0075 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 2.5e-47 195.3 703 45.8
Zm00001eb027100 Zea mays HOM05D005996 ORTHO05D007507 1.6e-46 192.6 298 67.4
CARHR243120 Cardamine hirsuta HOM05D005996 ORTHO05D007507 4.0e-45 188.0 685 43.9
Actinidia21406 Actinidia chinensis HOM05D005996 ORTHO05D007507 4.5e-44 184.5 171 64.3
AagrBONN_evm.TU.Sc2ySwM_228.2051 Anthoceros agrestis HOM05D005996 ORTHO05D007507 9.3e-42 176.8 698 56.0
Nitab4.5_0000980g0280 Nicotiana tabacum HOM05D005996 ORTHO05D007507 1.6e-41 176.0 123 71.5
Pp3c12_14320 Physcomitrium patens HOM05D005996 ORTHO05D007507 2.3e-40 172.2 271 41.0
Pp3c10_19570 Physcomitrium patens HOM05D005996 ORTHO05D007507 1.1e-39 169.9 276 38.8
Mapoly0039s0079 Marchantia polymorpha HOM05D005996 ORTHO05D007507 1.2e-36 159.8 272 37.1
Mapoly0039s0078 Marchantia polymorpha HOM05D005996 ORTHO05D007507 2.6e-36 158.7 238 43.3
CDE09G0259 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 7.1e-34 150.6 162 49.4
ATR0913G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 2.1e-33 149.1 317 66.2
CDE09G0218 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 4.6e-33 147.9 128 60.9
MBI09_g44523_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 3.4e-28 131.7 113 61.1
SEGI_22573 Sequoiadendron giganteum HOM05D005996 ORTHO05D007507 7.6e-28 130.6 138 52.2
CBR_g66762 Chara braunii HOM05D005996 ORTHO05D007507 3.5e-25 121.7 285 31.9
ATR0074G001 Amborella trichopoda HOM05D005996 ORTHO05D007507 6.0e-25 120.9 107 57.9
Pp3c7_22430 Physcomitrium patens HOM05D005996 ORTHO05D007507 5.1e-24 117.9 652 49.1
SMO240G0032 Selaginella moellendorffii HOM05D005996 ORTHO05D007507 4.8e-22 111.3 94 56.4
CDE09G0717 Ceratophyllum demersum HOM05D005996 ORTHO05D007507 1.2e-20 106.7 100 77.0
MCO09G858 Micromonas commoda HOM05D005996 ORTHO05D007507 1.6e-17 96.3 255 31.8
Ciclev10028828m.g Citrus clementina HOM05D005996 ORTHO05D007507 6.3e-14 84.3 377 28.9
QL11p047023 Quercus lobata HOM05D005996 ORTHO05D007507 2.5e-10 72.4 107 47.7
SMO106G0001 Selaginella moellendorffii HOM05D013590 ORTHO05D015741 2.1e-09 69.3 74 47.3
MBI09_g46961_MAGBIO Magnolia biondii HOM05D005996 ORTHO05D007507 1.0e-08 67.0 39 82.1
SMO301G0041 Selaginella moellendorffii HOM05D013590 ORTHO05D015741 8.2e-06 57.4 59 49.2


User provided reference genes

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