Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 4.5e-208 727.6 354 100.0
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 1.6e-120 436.8 399 58.9
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 7.1e-113 411.4 328 64.0
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 1.7e-106 390.2 373 57.4
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 6.5e-106 388.3 279 70.6
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 1.5e-102 377.1 313 61.3
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 3.2e-97 359.4 350 55.1
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 1.8e-95 353.6 383 50.7
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 3.0e-95 352.8 301 57.1
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 3.3e-94 349.4 381 52.8
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 4.3e-94 349.0 315 58.4
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 5.7e-94 348.6 349 52.7
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 4.8e-93 345.5 298 59.4
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 8.2e-93 344.7 380 51.3
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 8.2e-93 344.7 353 53.8
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 1.1e-92 344.4 294 61.9
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 1.1e-92 344.4 298 59.4
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 3.1e-92 342.8 340 55.3
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 3.1e-92 342.8 345 53.3
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 4.1e-92 342.4 353 52.7
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 5.3e-92 342.0 315 57.1
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.2e-91 340.9 368 50.8
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.5e-91 340.5 316 57.0
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 3.4e-91 339.3 369 49.6
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 4.5e-91 339.0 294 59.9
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 4.5e-91 339.0 359 52.1
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 4.5e-91 339.0 358 50.6
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 5.9e-91 338.6 321 53.9
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 7.7e-91 338.2 310 55.2
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 7.7e-91 338.2 369 49.1
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 7.7e-91 338.2 294 56.8
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.7e-90 337.0 322 54.7
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 2.2e-90 336.7 379 50.4
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 5.0e-90 335.5 315 55.2
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 5.0e-90 335.5 297 58.9
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 6.5e-90 335.1 316 56.6
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 1.1e-89 334.3 372 49.2
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 3.2e-89 332.8 276 61.2
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 3.6e-88 329.3 351 53.3
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 4.7e-88 328.9 291 58.4
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 6.1e-88 328.6 310 55.8
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 1.0e-87 327.8 338 53.8
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 1.0e-87 327.8 355 51.0
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.4e-87 327.4 290 57.9
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.4e-87 327.4 300 55.0
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 2.3e-87 326.6 293 57.7
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 6.7e-87 325.1 300 54.3
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 8.8e-87 324.7 297 57.9
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 8.8e-87 324.7 351 51.9
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 4.4e-86 322.4 297 58.2
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 5.7e-86 322.0 329 53.2
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 7.4e-86 321.6 354 50.6
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 1.7e-85 320.5 283 57.6
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 3.7e-85 319.3 325 52.6
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 2.4e-84 316.6 320 52.8
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 4.1e-84 315.8 292 53.8
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 7.0e-84 315.1 391 47.3
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 9.1e-84 314.7 376 48.7
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 2.6e-83 313.2 324 51.9
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.6e-83 313.2 289 56.4
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 1.3e-82 310.8 287 56.4
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 1.7e-82 310.5 288 55.6
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 3.8e-82 309.3 323 49.8
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 1.4e-81 307.4 304 52.3
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 9.4e-81 304.7 304 52.0
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 6.1e-80 302.0 298 56.0
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 1.4e-79 300.8 312 51.0
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 3.0e-79 299.7 276 57.2
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 3.0e-79 299.7 287 54.0
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 5.2e-79 298.9 320 50.6
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 1.1e-78 297.7 286 52.1
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 1.5e-78 297.4 338 50.3
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 2.6e-78 296.6 249 62.2
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 5.7e-78 295.4 284 52.8
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.7e-77 293.9 293 50.9
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 8.2e-77 291.6 297 52.5
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 1.1e-76 291.2 285 50.5
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 1.1e-76 291.2 369 47.7
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 2.6e-75 286.6 289 52.2
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 2.6e-75 286.6 289 52.2
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 5.9e-75 285.4 300 50.3
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 7.7e-75 285.0 299 52.2
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 7.7e-75 285.0 298 50.7
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 7.2e-73 278.5 294 49.7
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 1.4e-71 274.2 236 58.9
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 4.1e-68 262.7 291 47.1
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 1.5e-65 254.2 290 45.9
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 9.4e-65 251.5 305 46.6
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 2.7e-64 250.0 271 49.8
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 8.3e-61 238.4 216 56.9
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 3.1e-60 236.5 254 51.6
Hma1.2p1_0271F.1_g108750 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 6.1e-56 222.2 151 73.5
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 3.1e-47 193.4 319 37.9
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 2.7e-43 180.3 310 34.8
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 2.3e-42 177.2 314 34.7
Atru.chr5.3567 Acer truncatum HOM05D007297 ORTHO05D009352 2.1e-40 170.6 126 65.9
Hma1.2p1_1276F.1_g272150 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 9.8e-38 161.8 115 72.2
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 4.6e-35 152.9 289 32.2
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.0e-34 151.8 226 39.8
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 1.7e-29 134.4 111 60.4
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 9.2e-28 128.6 287 30.3
Hma1.2p1_0367F.1_g137160 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 2.3e-26 124.0 86 73.3
Hma1.2p1_1819F.1_g304100 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 5.2e-23 112.8 74 77.0
AL7G47220 Arabidopsis lyrata HOM05D007297 ORTHO05D009352 3.8e-21 106.7 101 56.4
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 3.3e-17 93.6 212 28.8
Hma1.2p1_0422F.1_g150110 Hydrangea macrophylla HOM05D007297 ORTHO05D009352 4.7e-16 89.7 51 78.4
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 6.4e-13 79.3 124 39.5
Cpa.g.sc2396.1 Carica papaya HOM05D007297 ORTHO05D009352 6.9e-07 59.3 102 40.2
Eucgr.L00579 Eucalyptus grandis HOM05D007297 ORTHO05D009352 3.4e-06 57.0 28 82.1


User provided reference genes

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