Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia31647 Actinidia chinensis HOM05D006049 ORTHO05D007199 1.1e-232 809.7 419 100.0
Actinidia13628 Actinidia chinensis HOM05D006049 ORTHO05D007199 1.4e-62 244.6 488 42.0
vmacro06870 Vaccinium macrocarpon HOM05D006049 ORTHO05D007199 5.0e-41 172.9 445 36.4
CSS0039931 Camellia sinensis var. sinensis HOM05D006049 ORTHO05D007199 4.1e-35 153.3 446 34.8
CSS0012358 Camellia sinensis var. sinensis HOM05D006049 ORTHO05D007199 6.0e-34 149.4 203 53.2
Dinv21874 Davidia involucrata HOM05D006049 ORTHO05D007199 3.6e-31 140.2 197 49.2
Dinv34516 Davidia involucrata HOM05D002347 ORTHO05D007199 8.1e-31 139.0 491 31.0
DCAR_020159 Daucus carota HOM05D006049 ORTHO05D007199 1.4e-27 128.3 518 30.5
Cfa001175 Carpinus fangiana HOM05D006049 ORTHO05D007199 4.0e-22 110.2 302 33.4
Lj1A971T59 Lonicera japonica HOM05D006049 ORTHO05D007199 2.2e-20 104.4 302 32.5
QL08p065409 Quercus lobata HOM05D006049 ORTHO05D007199 2.9e-20 104.0 296 32.1
Haze_17387 Corylus avellana HOM05D006049 ORTHO05D007199 3.8e-20 103.6 302 32.5
Oeu023789.1 Olea europaea HOM05D006049 ORTHO05D007199 7.8e-18 95.9 297 33.0
Nitab4.5_0000071g0320 Nicotiana tabacum HOM05D006049 ORTHO05D007199 3.0e-17 94.0 382 29.8
Peaxi162Scf00304g00826 Petunia axillaris HOM05D006049 ORTHO05D007199 3.9e-17 93.6 306 30.4
GSVIVG01032875001 Vitis vinifera HOM05D006049 ORTHO05D007199 5.1e-17 93.2 365 30.1
CiPaw.02G199600 Carya illinoinensis HOM05D006049 ORTHO05D007199 8.7e-17 92.4 360 27.8
FvH4_7g26360 Fragaria vesca HOM05D006049 ORTHO05D007199 8.7e-17 92.4 342 29.8
FAN01G2405 Fragaria x ananassa HOM05D006049 ORTHO05D007199 8.7e-17 92.4 342 29.2
FAN06G4040 Fragaria x ananassa HOM05D006049 ORTHO05D007199 1.5e-16 91.7 342 29.5
Cc02_g04990 Coffea canephora HOM05D006049 ORTHO05D007199 4.3e-16 90.1 299 30.1
TAR633G2188 Trochodendron aralioides HOM05D006049 ORTHO05D007199 5.6e-16 89.7 313 30.7
FAN03G3258 Fragaria x ananassa HOM05D006049 ORTHO05D007199 1.6e-15 88.2 342 28.7
RcHm_v2.0_Chr1g0372921 Rosa chinensis HOM05D006049 ORTHO05D007199 1.6e-15 88.2 354 28.8
MD01G1172700 Malus domestica HOM05D006049 ORTHO05D007199 2.1e-15 87.8 348 28.2
Hma1.2p1_0264F.1_g105720 Hydrangea macrophylla HOM05D006049 ORTHO05D007199 3.6e-15 87.0 215 39.1
MD07G1239000 Malus domestica HOM05D006049 ORTHO05D007199 1.4e-14 85.1 350 28.6
Gohir.A13G008800 Gossypium hirsutum HOM05D006049 ORTHO05D007199 2.4e-14 84.3 310 28.7
Nitab4.5_0005479g0030 Nicotiana tabacum HOM05D006049 ORTHO05D007199 2.4e-14 84.3 357 29.7
Gorai.013G010200 Gossypium raimondii HOM05D006049 ORTHO05D007199 3.1e-14 84.0 308 28.9
Thecc.10G188200 Theobroma cacao HOM05D006049 ORTHO05D007199 4.0e-14 83.6 302 29.5
Gohir.D13G009500 Gossypium hirsutum HOM05D006049 ORTHO05D007199 5.3e-14 83.2 308 28.9
Solyc03g095250.3 Solanum lycopersicum HOM05D006049 ORTHO05D007199 2.6e-13 80.9 286 31.5
TWI53G0196 Tripterygium wilfordii HOM05D006049 ORTHO05D007199 2.6e-13 80.9 185 37.8
Atru.chr12.223 Acer truncatum HOM05D006049 ORTHO05D007199 5.8e-13 79.7 517 27.7
Ciclev10030611m.g Citrus clementina HOM05D006049 ORTHO05D007199 1.3e-12 78.6 203 32.5
Peaxi162Scf00073g02032 Petunia axillaris HOM05D006049 ORTHO05D007199 1.7e-12 78.2 306 29.1
MBI03_g15319_MAGBIO Magnolia biondii HOM05D006049 ORTHO05D007199 2.2e-12 77.8 188 35.6
Sopen03g025250 Solanum pennellii HOM05D006049 ORTHO05D007199 6.4e-12 76.3 290 30.3
ECA232G0668 Erigeron canadensis HOM05D006049 ORTHO05D007199 1.1e-11 75.5 241 33.2
PGSC0003DMG400027591 Solanum tuberosum HOM05D006049 ORTHO05D007199 2.4e-11 74.3 363 27.0
Duzib114G0134 Durio zibethinus HOM05D006049 ORTHO05D007199 5.4e-11 73.2 285 28.8
Duzib066G0004 Durio zibethinus HOM05D006049 ORTHO05D007199 9.3e-11 72.4 206 34.0
Solyc06g048470.4 Solanum lycopersicum HOM05D006049 ORTHO05D007199 9.3e-11 72.4 341 27.3
Nitab4.5_0000103g0050 Nicotiana tabacum HOM05D006049 ORTHO05D007199 1.2e-10 72.0 142 37.3
Sopen06g014620 Solanum pennellii HOM05D006049 ORTHO05D007199 2.1e-10 71.2 341 27.9
Nn5g26751 Nelumbo nucifera HOM05D006049 ORTHO05D007199 2.7e-10 70.9 186 34.4
CAN.G297.3 Capsicum annuum HOM05D006049 ORTHO05D007199 3.5e-10 70.5 299 28.4
Oeu001366.1 Olea europaea HOM05D006049 ORTHO05D007199 6.0e-10 69.7 338 28.1
COL.COLO4_19501 Corchorus olitorius HOM05D006049 ORTHO05D007199 1.3e-09 68.6 285 28.8
Nitab4.5_0001130g0010 Nicotiana tabacum HOM05D006049 ORTHO05D007199 1.8e-09 68.2 142 36.6
CANSAT56G0215 Cannabis sativa HOM05D006049 ORTHO05D007199 2.3e-09 67.8 214 32.7
Glyma.04G225000 Glycine max HOM05D006049 ORTHO05D007199 2.3e-09 67.8 308 28.2
CAN.G174.3 Capsicum annuum HOM05D006049 ORTHO05D007199 3.0e-09 67.4 246 30.1
Glyma.06G139800 Glycine max HOM05D006049 ORTHO05D007199 5.1e-09 66.6 141 34.8
Lj1g0003515 Lotus japonicus HOM05D006049 ORTHO05D007199 5.1e-09 66.6 315 30.2
Lalb_Chr11g0067581 Lupinus albus HOM05D006049 ORTHO05D007199 1.1e-08 65.5 342 26.3
Medtr3g093470 Medicago truncatula HOM05D006049 ORTHO05D007199 1.5e-08 65.1 310 28.4
PGSC0003DMG401005259 Solanum tuberosum HOM05D006049 ORTHO05D007199 1.5e-08 65.1 142 35.2
FAN03G2503 Fragaria x ananassa HOM05D006049 ORTHO05D007199 1.9e-08 64.7 134 36.6
Cpa.g.sc19.31 Carica papaya HOM05D006049 ORTHO05D007199 4.3e-08 63.5 169 33.7
Ca_16844_v3 Cicer arietinum L. HOM05D006049 ORTHO05D007199 9.6e-08 62.4 143 32.9
MD01G1179000 Malus domestica HOM05D006049 ORTHO05D007199 9.6e-08 62.4 118 33.9
PSO339G0528 Papaver somniferum HOM05D006049 ORTHO05D007199 1.3e-07 62.0 199 28.1
Potri.019G064000 Populus trichocarpa HOM05D006049 ORTHO05D007199 1.6e-07 61.6 192 28.6
Lsat_1_v5_gn_9_60500 Lactuca sativa HOM05D006049 ORTHO05D007199 2.8e-07 60.8 117 33.3
Manes.10G001760 Manihot esculenta HOM05D006049 ORTHO05D007199 2.8e-07 60.8 167 31.7
Prupe.2G267800 Prunus persica HOM05D006049 ORTHO05D007199 4.8e-07 60.1 136 36.0
SGA_v2.0_scaffold60G20868 Striga asiatica HOM05D006049 ORTHO05D007199 6.2e-07 59.7 126 38.1
TWI73G0405 Tripterygium wilfordii HOM05D006049 ORTHO05D007199 8.1e-07 59.3 310 27.4
Gohir.D10G183800 Gossypium hirsutum HOM05D006049 ORTHO05D007199 1.1e-06 58.9 184 33.2
Sabra19G0079600 Salix brachista HOM05D006049 ORTHO05D007199 1.1e-06 58.9 192 27.6
arahy.Tifrunner.gnm1.ann1.E7873Y Arachis hypogaea HOM05D006049 ORTHO05D007199 1.8e-06 58.2 311 28.3
Lsat_1_v5_gn_8_10841 Lactuca sativa HOM05D006049 ORTHO05D007199 2.4e-06 57.8 110 39.1
Gorai.011G206000 Gossypium raimondii HOM05D006049 ORTHO05D007199 5.3e-06 56.6 184 33.2
Sabra19G0077200 Salix brachista HOM05D006049 ORTHO05D007199 5.3e-06 56.6 192 27.1


User provided reference genes

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