Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.8e-298 1028.5 521 100.0
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.1e-189 665.6 516 63.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 3.1e-189 665.6 516 63.2
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 3.1e-189 665.6 513 63.0
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 9.0e-189 664.1 513 62.8
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 2.3e-184 649.4 516 61.6
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.1e-184 648.3 516 61.4
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 5.1e-184 648.3 516 61.4
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.5e-183 646.0 516 61.0
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.3e-182 643.7 516 61.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 1.3e-182 643.7 513 61.0
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 2.1e-182 642.9 527 60.0
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 2.1e-182 642.9 510 61.2
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 1.1e-181 640.6 516 60.5
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 1.4e-181 640.2 513 60.8
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.1e-181 639.0 503 61.6
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 6.9e-181 637.9 516 60.9
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.5e-180 636.7 516 61.4
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 2.0e-180 636.3 458 66.8
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 2.6e-180 636.0 512 60.7
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 3.4e-180 635.6 513 60.2
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.5e-180 635.2 513 60.4
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 5.8e-180 634.8 513 60.6
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 9.9e-180 634.0 514 59.1
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-179 633.6 513 60.4
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.3e-179 633.6 519 59.0
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.3e-179 633.6 513 60.2
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 3.8e-179 632.1 507 60.0
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 4.9e-179 631.7 495 61.6
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.1e-178 630.6 510 59.8
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 2.5e-178 629.4 501 61.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 5.5e-178 628.2 520 60.0
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 7.1e-178 627.9 520 59.0
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 9.3e-178 627.5 501 60.5
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 1.2e-177 627.1 524 58.2
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.6e-177 626.7 514 59.3
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 4.6e-177 625.2 516 59.1
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 4.6e-177 625.2 512 59.4
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.0e-176 624.0 501 60.7
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 1.0e-176 624.0 498 60.8
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-176 623.6 514 58.9
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.8e-176 623.2 515 58.8
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.1e-175 620.5 498 60.4
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.5e-175 620.2 508 58.9
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 2.5e-175 619.4 517 59.0
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 4.3e-175 618.6 515 58.3
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 9.6e-175 617.5 508 59.8
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 9.6e-175 617.5 512 60.4
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 1.3e-174 617.1 526 58.7
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.3e-174 617.1 515 58.4
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 1.6e-174 616.7 506 60.5
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.8e-174 615.9 499 59.3
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 4.8e-174 615.1 508 59.6
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 6.2e-174 614.8 500 60.2
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 8.2e-174 614.4 542 56.3
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 1.1e-173 614.0 508 58.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 1.8e-173 613.2 521 59.3
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 3.1e-173 612.5 521 58.5
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 3.1e-173 612.5 582 53.4
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 6.9e-173 611.3 514 58.0
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 9.0e-173 610.9 514 57.6
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 2.6e-172 609.4 511 58.1
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 2.6e-172 609.4 508 58.9
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 3.4e-172 609.0 513 58.1
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.5e-172 608.6 516 57.4
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 5.8e-172 608.2 490 59.4
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 1.0e-171 607.4 515 57.7
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.7e-171 606.7 521 57.4
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 6.5e-171 604.7 513 57.9
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 2.5e-170 602.8 510 57.3
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 3.2e-170 602.4 511 59.1
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.2e-169 600.5 506 57.3
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 1.6e-169 600.1 513 56.5
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 2.1e-169 599.7 513 56.5
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.1e-169 599.7 511 58.9
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.3e-168 596.3 516 57.4
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 6.7e-168 594.7 522 57.5
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 1.5e-167 593.6 512 56.2
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 1.9e-167 593.2 507 57.6
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.5e-167 592.8 518 57.7
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 7.4e-167 591.3 531 55.6
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 7.4e-167 591.3 512 56.2
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 7.4e-167 591.3 512 56.2
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 9.7e-167 590.9 527 55.8
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 2.4e-165 586.3 526 55.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 2.6e-164 582.8 522 55.2
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 8.5e-163 577.8 511 56.6
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.6e-161 573.5 531 54.4
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 2.7e-161 572.8 523 54.1
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 1.7e-158 563.5 496 54.6
DCAR_018674 Daucus carota HOM05D006476 ORTHO05D008178 6.9e-157 558.1 439 62.4
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.6e-156 556.2 498 56.0
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 6.7e-152 541.6 513 52.0
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 5.3e-149 531.9 436 60.1
Dinv12144 Davidia involucrata HOM05D006476 ORTHO05D008178 1.5e-146 523.9 352 69.0
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 6.1e-145 518.5 509 53.6
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.0e-144 517.7 516 51.0
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 3.3e-143 512.7 513 51.3
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 7.4e-143 511.5 514 51.6
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.1e-141 505.8 464 53.9
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 8.3e-134 481.5 426 56.3
Glyma.03G050400 Glycine max HOM05D006476 ORTHO05D008178 1.9e-130 470.3 413 57.6
Mapoly0062s0099 Marchantia polymorpha HOM05D006476 ORTHO05D008178 5.4e-109 399.1 389 49.9
Pp3c1_41280 Physcomitrium patens HOM05D006476 ORTHO05D008178 9.2e-109 398.3 422 47.6
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 1.4e-104 384.4 258 69.0
AagrBONN_evm.TU.Sc2ySwM_344.2114 Anthoceros agrestis HOM05D006476 ORTHO05D008178 3.1e-104 383.3 384 48.7
SEGI_26269 Sequoiadendron giganteum HOM05D006476 ORTHO05D008178 1.7e-102 377.5 388 49.0
SMO364G0439 Selaginella moellendorffii HOM05D006476 ORTHO05D008178 8.9e-96 355.1 443 41.5
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 1.5e-63 248.1 173 68.2
MD04G1164400 Malus domestica HOM05D006476 ORTHO05D008178 7.4e-50 202.6 122 77.0
Oeu061560.1 Olea europaea HOM05D006476 ORTHO05D008178 4.3e-42 176.8 140 54.3
MD04G1164300 Malus domestica HOM05D006476 ORTHO05D008178 1.0e-30 139.0 111 57.7
CBR_g7951 Chara braunii HOM05D006476 ORTHO05D008178 3.2e-29 134.0 310 27.7
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 2.5e-21 107.8 121 46.3
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 1.6e-12 78.6 88 40.9
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 1.3e-09 68.9 74 37.8
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 1.3e-09 68.9 74 37.8
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 1.3e-09 68.9 74 37.8
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 2.2e-09 68.2 53 56.6
MCO15G063 Micromonas commoda HOM05D006476 ORTHO05D008178 4.9e-09 67.0 114 32.5
PRCOL_00007100 Prasinoderma coloniale HOM05D006476 ORTHO05D008178 2.7e-07 61.2 100 31.0


User provided reference genes

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