Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28936 Actinidia chinensis HOM05D006606 ORTHO05D008429 2.5e-181 638.6 318 100.0
Rhsim02G0071700 Rhododendron simsii HOM05D006606 ORTHO05D008429 3.4e-154 548.5 319 84.6
Dinv22706 Davidia involucrata HOM05D006606 ORTHO05D008429 5.4e-152 541.2 320 84.7
CSS0008381 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 9.1e-152 540.4 303 87.8
CSS0041194 Camellia sinensis var. sinensis HOM05D006606 ORTHO05D008429 3.8e-150 535.0 303 86.8
GSVIVG01031662001 Vitis vinifera HOM05D006606 ORTHO05D008429 8.9e-147 523.9 310 83.9
Hma1.2p1_1286F.1_g273130 Hydrangea macrophylla HOM05D006606 ORTHO05D008429 3.4e-146 521.9 318 81.4
Nitab4.5_0006519g0030 Nicotiana tabacum HOM05D006606 ORTHO05D008429 6.3e-145 517.7 312 79.8
Cc03_g10820 Coffea canephora HOM05D006606 ORTHO05D008429 1.8e-144 516.2 292 84.6
TAR362G1133 Trochodendron aralioides HOM05D006606 ORTHO05D008429 1.8e-144 516.2 320 79.1
PGSC0003DMG401004586 Solanum tuberosum HOM05D006606 ORTHO05D008429 3.1e-144 515.4 317 78.5
Glyma.11G252500 Glycine max HOM05D006606 ORTHO05D008429 4.1e-144 515.0 310 80.3
Solyc12g098710.2 Solanum lycopersicum HOM05D006606 ORTHO05D008429 5.4e-144 514.6 317 78.5
Nitab4.5_0000978g0190 Nicotiana tabacum HOM05D006606 ORTHO05D008429 7.0e-144 514.2 312 79.5
Duzib041G0430 Durio zibethinus HOM05D006606 ORTHO05D008429 9.2e-144 513.8 315 78.7
Gohir.A02G065800 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.2e-143 513.5 310 80.3
Gohir.D02G071700 Gossypium hirsutum HOM05D006606 ORTHO05D008429 1.2e-143 513.5 310 79.7
Gorai.005G080900 Gossypium raimondii HOM05D006606 ORTHO05D008429 1.6e-143 513.1 310 79.7
CAN.G484.128 Capsicum annuum HOM05D006606 ORTHO05D008429 5.9e-143 511.1 312 78.8
RcHm_v2.0_Chr4g0410061 Rosa chinensis HOM05D006606 ORTHO05D008429 5.9e-143 511.1 305 81.6
Glyma.18G004400 Glycine max HOM05D006606 ORTHO05D008429 7.8e-143 510.8 312 80.1
CANSAT78G0692 Cannabis sativa HOM05D006606 ORTHO05D008429 1.3e-142 510.0 313 79.2
arahy.Tifrunner.gnm1.ann1.B1TKD1 Arachis hypogaea HOM05D006606 ORTHO05D008429 1.7e-142 509.6 314 77.4
Lalb_Chr23g0278211 Lupinus albus HOM05D006606 ORTHO05D008429 2.3e-142 509.2 291 83.2
Thecc.08G146500 Theobroma cacao HOM05D006606 ORTHO05D008429 2.3e-142 509.2 317 78.5
Cpa.g.sc8.304 Carica papaya HOM05D006606 ORTHO05D008429 3.8e-142 508.4 309 80.3
Potri.014G146900 Populus trichocarpa HOM05D006606 ORTHO05D008429 3.8e-142 508.4 303 81.5
Nn1g09788 Nelumbo nucifera HOM05D006606 ORTHO05D008429 8.6e-142 507.3 321 78.5
FAN12G1058 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.1e-141 506.9 305 81.3
FAN12G2609 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.1e-141 506.9 305 81.3
Cfa008709 Carpinus fangiana HOM05D006606 ORTHO05D008429 1.9e-141 506.1 308 81.2
FAN17G1362 Fragaria x ananassa HOM05D006606 ORTHO05D008429 1.9e-141 506.1 305 81.3
arahy.Tifrunner.gnm1.ann1.V8KL47 Arachis hypogaea HOM05D006606 ORTHO05D008429 2.5e-141 505.8 314 76.4
FAN22G0658 Fragaria x ananassa HOM05D006606 ORTHO05D008429 2.5e-141 505.8 305 81.0
Prupe.1G177500 Prunus persica HOM05D006606 ORTHO05D008429 2.5e-141 505.8 317 79.2
FvH4_4g12260 Fragaria vesca HOM05D006606 ORTHO05D008429 3.3e-141 505.4 305 81.0
HanXRQChr10g0293961 Helianthus annuus HOM05D006606 ORTHO05D008429 4.3e-141 505.0 305 79.3
Oeu013395.1 Olea europaea HOM05D006606 ORTHO05D008429 4.3e-141 505.0 306 80.4
MELO3C017709.2 Cucumis melo HOM05D006606 ORTHO05D008429 5.6e-141 504.6 293 83.3
PSO017G6954 Papaver somniferum HOM05D006606 ORTHO05D008429 5.6e-141 504.6 323 75.2
SalBow6G4530 Salvia bowleyana HOM05D006606 ORTHO05D008429 5.6e-141 504.6 307 79.2
CiPaw.03G116300 Carya illinoinensis HOM05D006606 ORTHO05D008429 7.3e-141 504.2 292 83.9
Phvul.001G263600 Phaseolus vulgaris HOM05D006606 ORTHO05D008429 9.5e-141 503.8 291 82.1
VMungo1383G1705 Vigna mungo HOM05D006606 ORTHO05D008429 9.5e-141 503.8 307 78.8
MSTRG.21987 Avicennia marina HOM05D006606 ORTHO05D008429 1.6e-140 503.1 314 77.7
Lalb_Chr11g0075821 Lupinus albus HOM05D006606 ORTHO05D008429 2.1e-140 502.7 292 81.8
DCAR_023800 Daucus carota HOM05D006606 ORTHO05D008429 3.6e-140 501.9 323 76.5
Sed0006939 Sechium edule HOM05D006606 ORTHO05D008429 3.6e-140 501.9 295 82.7
PSO675G4216 Papaver somniferum HOM05D006606 ORTHO05D008429 8.0e-140 500.7 326 74.5
ClCG07G015730 Citrullus lanatus HOM05D006606 ORTHO05D008429 1.4e-139 500.0 295 82.0
MD04G1028100 Malus domestica HOM05D006606 ORTHO05D008429 1.8e-139 499.6 317 77.3
TWI09G1191 Tripterygium wilfordii HOM05D006606 ORTHO05D008429 2.3e-139 499.2 314 77.4
Ah.04g149880 Amaranthus hybridus HOM05D006606 ORTHO05D008429 3.0e-139 498.8 313 77.0
Sc19g0007700 Simmondsia chinensis HOM05D006606 ORTHO05D008429 3.0e-139 498.8 318 76.1
CsaV3_4G003370 Cucumis sativus L. HOM05D006606 ORTHO05D008429 4.0e-139 498.4 292 82.9
Migut.N00458 Erythranthe guttata HOM05D006606 ORTHO05D008429 6.8e-139 497.7 294 81.3
QL10p044478 Quercus lobata HOM05D006606 ORTHO05D008429 8.9e-139 497.3 308 81.8
PGR119G1918 Punica granatum HOM05D006606 ORTHO05D008429 1.2e-138 496.9 295 82.0
unitig_22.g6833 Utricularia gibba HOM05D006606 ORTHO05D008429 1.2e-138 496.9 314 75.5
Lj4g0003716 Lotus japonicus HOM05D006606 ORTHO05D008429 1.5e-138 496.5 314 75.5
TPR.G18107 Trifolium pratense HOM05D006606 ORTHO05D008429 1.5e-138 496.5 291 80.8
Sabra14G0110300 Salix brachista HOM05D006606 ORTHO05D008429 3.4e-138 495.4 349 71.6
Ca_16442_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 7.5e-138 494.2 291 80.1
AT1G10830 Arabidopsis thaliana HOM05D006606 ORTHO05D008429 2.2e-137 492.7 292 79.8
Ciclev10020648m.g Citrus clementina HOM05D006606 ORTHO05D008429 1.4e-136 490.0 292 79.5
Lsat_1_v5_gn_2_48240 Lactuca sativa HOM05D006606 ORTHO05D008429 1.8e-136 489.6 314 76.1
Medtr3g084950 Medicago truncatula HOM05D006606 ORTHO05D008429 1.8e-136 489.6 291 78.7
Oeu007220.2 Olea europaea HOM05D006606 ORTHO05D008429 1.8e-136 489.6 303 79.2
Psat7g076840 Pisum sativum HOM05D006606 ORTHO05D008429 1.8e-136 489.6 314 75.2
Aqoxy2G04062 Aquilegia oxysepala HOM05D006606 ORTHO05D008429 2.4e-136 489.2 294 79.9
AUR62020943 Chenopodium quinoa HOM05D006606 ORTHO05D008429 3.2e-136 488.8 314 75.2
SGA_v2.0_scaffold178G39486 Striga asiatica HOM05D006606 ORTHO05D008429 3.2e-136 488.8 285 82.8
AL1G21760 Arabidopsis lyrata HOM05D006606 ORTHO05D008429 4.1e-136 488.4 292 79.5
A06p07610 Brassica napus HOM05D006606 ORTHO05D008429 9.2e-136 487.3 292 78.4
BraA06t23963Z Brassica rapa HOM05D006606 ORTHO05D008429 9.2e-136 487.3 292 78.4
Thhalv10007996m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 9.2e-136 487.3 292 78.4
BolC5t29661H Brassica oleracea HOM05D000246 ORTHO05D005907 1.2e-135 486.9 292 78.4
Carub.0001s1037 Capsella rubella HOM05D006606 ORTHO05D008429 1.6e-135 486.5 292 79.5
Atru.chr3.1730 Acer truncatum HOM05D006606 ORTHO05D008429 2.0e-135 486.1 301 78.7
C05p09200 Brassica napus HOM05D006606 ORTHO05D008429 2.7e-135 485.7 292 78.1
Ca_18015_v3 Cicer arietinum L. HOM05D006606 ORTHO05D008429 4.6e-135 485.0 301 76.1
Medtr8g097190 Medicago truncatula HOM05D006606 ORTHO05D008429 7.8e-135 484.2 311 75.2
Aa31LG1G4020 Aethionema arabicum HOM05D006606 ORTHO05D008429 2.3e-134 482.6 292 78.8
Os12g0405200 Oryza sativa ssp. japonica HOM05D006606 ORTHO05D008429 2.3e-134 482.6 306 75.2
Sp1g09530 Schrenkiella parvula HOM05D006606 ORTHO05D008429 3.0e-134 482.3 292 78.8
THA.LOC104823658 Tarenaya hassleriana HOM05D006606 ORTHO05D008429 3.9e-134 481.9 291 79.7
CARHR011050 Cardamine hirsuta HOM05D006606 ORTHO05D008429 5.0e-134 481.5 312 73.7
FAN07G1739 Fragaria x ananassa HOM05D006606 ORTHO05D008429 5.6e-133 478.0 352 69.3
Eucgr.C03850 Eucalyptus grandis HOM05D006606 ORTHO05D008429 2.1e-132 476.1 295 78.0
ATR0561G173 Amborella trichopoda HOM05D006606 ORTHO05D008429 2.3e-131 472.6 288 78.8
Haze_11718 Corylus avellana HOM05D006606 ORTHO05D008429 3.4e-130 468.8 353 68.3
Zm00001eb408760 Zea mays HOM05D006606 ORTHO05D008429 7.5e-130 467.6 292 75.0
Peaxi162Scf00378g00631 Petunia axillaris HOM05D006606 ORTHO05D008429 5.4e-128 461.5 312 72.4
ECA238G2565 Erigeron canadensis HOM05D001656 ORTHO05D003489 2.0e-127 459.5 288 76.4
EL10Ac3g07392 Beta vulgaris HOM05D006606 ORTHO05D008429 2.3e-123 446.0 314 68.5
BcaC05g24964 Brassica carinata HOM05D006606 ORTHO05D008429 1.2e-122 443.7 291 74.2
Lj3A376T54 Lonicera japonica HOM05D006606 ORTHO05D008429 1.6e-119 433.3 229 91.3
SMO270G0095 Selaginella moellendorffii HOM05D006606 ORTHO05D008429 2.7e-119 432.6 291 68.0
Pp3c1_22590 Physcomitrium patens HOM05D006606 ORTHO05D008429 1.3e-118 430.3 300 67.7
Mapoly0040s0091 Marchantia polymorpha HOM05D006606 ORTHO05D008429 3.9e-118 428.7 303 67.0
Mapoly0040s0092 Marchantia polymorpha HOM05D006606 ORTHO05D008429 1.9e-117 426.4 305 66.2
AUR62018480 Chenopodium quinoa HOM05D006606 ORTHO05D008429 1.8e-115 419.9 275 74.2
CBR_g17600 Chara braunii HOM05D006606 ORTHO05D008429 6.8e-115 417.9 311 64.6
AagrBONN_evm.TU.Sc2ySwM_228.2148 Anthoceros agrestis HOM05D006606 ORTHO05D008429 9.9e-114 414.1 300 65.3
Pp3c17_7640 Physcomitrium patens HOM05D006606 ORTHO05D008429 4.9e-113 411.8 292 66.8
COL.COLO4_38511 Corchorus olitorius HOM05D006606 ORTHO05D008429 2.0e-106 389.8 376 57.7
Lj3A357T51 Lonicera japonica HOM05D006606 ORTHO05D008429 6.4e-97 358.2 182 92.3
HPP92_024552 Vanilla planifolia HOM05D006606 ORTHO05D008429 1.5e-90 337.0 246 69.9
Cre19.g750247 Chlamydomonas reinhardtii HOM05D006606 ORTHO05D008429 1.7e-89 333.6 296 56.8
Sopen12g033460 Solanum pennellii HOM05D006606 ORTHO05D008429 3.4e-82 309.3 210 72.4
SEGI_35229 Sequoiadendron giganteum HOM05D006606 ORTHO05D008429 1.3e-81 307.4 215 66.5
Manes.01G001200 Manihot esculenta HOM05D006606 ORTHO05D008429 5.1e-78 295.4 183 79.8
Psat5g098600 Pisum sativum HOM05D006606 ORTHO05D008429 5.1e-78 295.4 179 79.9
CDE09G0731 Ceratophyllum demersum HOM05D006606 ORTHO05D008429 6.7e-78 295.0 209 72.2
Hund24463 Selenicereus undatus HOM05D006606 ORTHO05D008429 9.7e-77 291.2 211 70.1
TPR.G26571 Trifolium pratense HOM05D006606 ORTHO05D008429 1.6e-71 273.9 303 51.5
Thhalv10000634m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 9.7e-45 184.9 239 46.9
VMungo1383G0479 Vigna mungo HOM05D000517 ORTHO05D000751 2.0e-21 107.5 59 74.6
Lj3C357T11 Lonicera japonica HOM05D006606 ORTHO05D008429 3.2e-19 100.1 73 67.1
Lj3C376T8 Lonicera japonica HOM05D006606 ORTHO05D008429 3.2e-19 100.1 73 67.1
Thhalv10029367m.g Eutrema salsugineum HOM05D006606 ORTHO05D008429 2.8e-15 87.0 63 63.5
PSO017G3682 Papaver somniferum HOM05D006606 ORTHO05D008429 4.6e-10 69.7 36 80.6


User provided reference genes

Program Settings