Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28923 Actinidia chinensis HOM05D003842 ORTHO05D004436 2.1e-83 312.4 167 100.0
Actinidia26647 Actinidia chinensis HOM05D003842 ORTHO05D004436 4.0e-50 201.8 155 75.5
CSS0021824 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 9.0e-50 200.7 156 73.7
CSS0023266 Camellia sinensis var. sinensis HOM05D003842 ORTHO05D004436 9.0e-50 200.7 156 73.7
vmacro07325 Vaccinium macrocarpon HOM05D003842 ORTHO05D004436 1.7e-48 196.4 156 72.4
Dinv35821 Davidia involucrata HOM05D003842 ORTHO05D004436 2.1e-46 189.5 156 67.9
TAR633G0529 Trochodendron aralioides HOM05D003842 ORTHO05D004436 4.6e-46 188.3 158 69.6
Nn6g35197 Nelumbo nucifera HOM05D003842 ORTHO05D004436 1.1e-44 183.7 157 66.9
Hma1.2p1_0547F.1_g176420 Hydrangea macrophylla HOM05D003842 ORTHO05D004436 2.5e-44 182.6 156 65.4
MD12G1104900 Malus domestica HOM05D003842 ORTHO05D004436 5.7e-44 181.4 158 68.4
Manes.08G013802 Manihot esculenta HOM05D003842 ORTHO05D004436 1.3e-43 180.3 157 66.9
CiPaw.09G003300 Carya illinoinensis HOM05D003842 ORTHO05D004436 4.8e-43 178.3 157 66.9
Migut.L01724 Erythranthe guttata HOM05D003842 ORTHO05D004436 8.2e-43 177.6 156 65.4
Cfa016461 Carpinus fangiana HOM05D003842 ORTHO05D004436 1.4e-42 176.8 158 66.5
SGA_v2.0_scaffold224G42922 Striga asiatica HOM05D003842 ORTHO05D004436 1.4e-42 176.8 156 65.4
MSTRG.26674 Avicennia marina HOM05D003842 ORTHO05D004436 1.8e-42 176.4 156 65.4
GSVIVG01033696001 Vitis vinifera HOM05D003842 ORTHO05D004436 9.0e-42 174.1 157 63.7
Ciclev10024523m.g Citrus clementina HOM05D003842 ORTHO05D004436 1.5e-41 173.3 158 64.6
Thecc.05G072900 Theobroma cacao HOM05D003842 ORTHO05D004436 3.4e-41 172.2 158 65.8
Cc06_g04620 Coffea canephora HOM05D003842 ORTHO05D004436 5.9e-41 171.4 156 61.5
FAN05G4099 Fragaria x ananassa HOM05D003842 ORTHO05D004436 5.9e-41 171.4 161 64.6
EL10Ac7g16718 Beta vulgaris HOM05D003842 ORTHO05D004436 7.6e-41 171.0 158 65.8
Atru.chr8.1723 Acer truncatum HOM05D003842 ORTHO05D004436 1.3e-40 170.2 157 64.3
Atru.chr8.1733 Acer truncatum HOM05D003842 ORTHO05D004436 1.3e-40 170.2 157 64.3
Potri.006G120800 Populus trichocarpa HOM05D003842 ORTHO05D004436 1.7e-40 169.9 157 64.3
CANSAT80G2389 Cannabis sativa HOM05D003842 ORTHO05D004436 2.2e-40 169.5 157 63.7
FAN02G1267 Fragaria x ananassa HOM05D003842 ORTHO05D004436 2.2e-40 169.5 161 64.6
FAN05G0072 Fragaria x ananassa HOM05D003842 ORTHO05D004436 2.2e-40 169.5 161 64.0
Solyc09g008490.4 Solanum lycopersicum HOM05D003842 ORTHO05D004436 2.9e-40 169.1 157 62.4
Sopen09g003320 Solanum pennellii HOM05D003842 ORTHO05D004436 2.9e-40 169.1 157 62.4
Prupe.7G124700 Prunus persica HOM05D003842 ORTHO05D004436 3.8e-40 168.7 158 65.8
Ah.08g211380 Amaranthus hybridus HOM05D003842 ORTHO05D004436 5.0e-40 168.3 158 63.3
FvH4_6g17010 Fragaria vesca HOM05D003842 ORTHO05D004436 5.0e-40 168.3 161 63.4
Sc20g0005740 Simmondsia chinensis HOM05D003842 ORTHO05D004436 5.0e-40 168.3 157 61.1
CsaV3_6G040160 Cucumis sativus L. HOM05D003842 ORTHO05D004436 8.5e-40 167.5 157 61.8
CAN.G1038.13 Capsicum annuum HOM05D003842 ORTHO05D004436 1.1e-39 167.2 157 61.8
Duzib093G0118 Durio zibethinus HOM05D003842 ORTHO05D004436 1.1e-39 167.2 158 63.9
Duzib106G1778 Durio zibethinus HOM05D003842 ORTHO05D004436 1.1e-39 167.2 158 64.6
Gohir.D11G342350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 1.1e-39 167.2 158 63.9
Gorai.007G372400 Gossypium raimondii HOM05D003842 ORTHO05D004436 1.1e-39 167.2 158 63.9
Sed0026042 Sechium edule HOM05D003842 ORTHO05D004436 1.1e-39 167.2 157 61.8
TWI74G0820 Tripterygium wilfordii HOM05D003842 ORTHO05D004436 1.1e-39 167.2 159 63.5
MELO3C024492.2 Cucumis melo HOM05D003842 ORTHO05D004436 1.4e-39 166.8 157 61.8
FAN09G2316 Fragaria x ananassa HOM05D003842 ORTHO05D004436 1.9e-39 166.4 161 63.4
PSO063G4107 Papaver somniferum HOM05D003842 ORTHO05D004436 1.9e-39 166.4 176 58.5
FAN14G4083 Fragaria x ananassa HOM05D003842 ORTHO05D004436 2.5e-39 166.0 161 62.7
PSO339G3623 Papaver somniferum HOM05D003842 ORTHO05D004436 3.2e-39 165.6 176 59.1
Sabra06G0095000 Salix brachista HOM05D003842 ORTHO05D004436 7.2e-39 164.5 157 63.1
Aqoxy1G01066 Aquilegia oxysepala HOM05D003842 ORTHO05D004436 9.3e-39 164.1 156 59.6
THA.LOC104818591 Tarenaya hassleriana HOM05D003842 ORTHO05D004436 9.3e-39 164.1 158 62.7
AUR62036532 Chenopodium quinoa HOM05D003842 ORTHO05D004436 2.1e-38 162.9 155 63.2
HanXRQChr13g0400661 Helianthus annuus HOM05D003842 ORTHO05D004436 2.7e-38 162.5 156 62.2
Haze_19462 Corylus avellana HOM05D003842 ORTHO05D004436 4.6e-38 161.8 182 56.0
ECA233G4297 Erigeron canadensis HOM05D003842 ORTHO05D004436 4.6e-38 161.8 158 60.8
QL07p041738 Quercus lobata HOM05D003842 ORTHO05D004436 4.6e-38 161.8 158 62.0
Sp4g19070 Schrenkiella parvula HOM05D003842 ORTHO05D004436 6.1e-38 161.4 158 62.7
AL4G33000 Arabidopsis lyrata HOM05D003842 ORTHO05D004436 7.9e-38 161.0 157 60.5
AT2G36810 Arabidopsis thaliana HOM05D003842 ORTHO05D004436 1.0e-37 160.6 158 62.0
Aa31LG5G22020 Aethionema arabicum HOM05D003842 ORTHO05D004436 1.4e-37 160.2 155 62.6
Lalb_Chr20g0112381 Lupinus albus HOM05D003842 ORTHO05D004436 1.4e-37 160.2 176 56.8
A04p28120 Brassica napus HOM05D003842 ORTHO05D004436 2.3e-37 159.5 158 62.0
BolC4t28040H Brassica oleracea HOM05D003842 ORTHO05D004436 2.3e-37 159.5 158 62.0
BcaC02g07579 Brassica carinata HOM05D003842 ORTHO05D004436 3.0e-37 159.1 158 62.0
C04p65510 Brassica napus HOM05D003842 ORTHO05D004436 3.9e-37 158.7 158 62.0
BraA04t18297Z Brassica rapa HOM05D003842 ORTHO05D004436 3.9e-37 158.7 158 62.0
Carub.0004s1865 Capsella rubella HOM05D003842 ORTHO05D004436 3.9e-37 158.7 158 61.4
PGR142G1271 Punica granatum HOM05D003842 ORTHO05D004436 6.7e-37 157.9 158 60.8
arahy.Tifrunner.gnm1.ann1.BQYP5G Arachis hypogaea HOM05D003842 ORTHO05D004436 1.5e-36 156.8 176 56.8
Phvul.001G181800 Phaseolus vulgaris HOM05D003842 ORTHO05D004436 4.3e-36 155.2 176 55.7
RcHm_v2.0_Chr3g0471001 Rosa chinensis HOM05D003842 ORTHO05D004436 4.3e-36 155.2 158 60.1
Lj1g0002569 Lotus japonicus HOM05D003842 ORTHO05D004436 5.7e-36 154.8 158 60.8
Glyma.19G186900 Glycine max HOM05D003842 ORTHO05D004436 2.8e-35 152.5 157 58.6
Psat3g040280 Pisum sativum HOM05D003842 ORTHO05D004436 8.2e-35 151.0 156 56.4
Ca_08873_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.4e-34 150.2 157 56.7
Eucgr.K02432 Eucalyptus grandis HOM05D003842 ORTHO05D004436 1.4e-34 150.2 122 68.0
AUR62042272 Chenopodium quinoa HOM05D003842 ORTHO05D004436 4.1e-34 148.7 110 71.8
COL.COLO4_26897 Corchorus olitorius HOM05D003842 ORTHO05D004436 5.3e-34 148.3 107 75.7
Lsat_1_v5_gn_6_28640 Lactuca sativa HOM05D003842 ORTHO05D004436 2.0e-33 146.4 145 61.4
Medtr7g102430 Medicago truncatula HOM05D003842 ORTHO05D004436 2.0e-33 146.4 157 55.4
Cpa.g.sc5.152 Carica papaya HOM05D003842 ORTHO05D004436 1.7e-32 143.3 106 74.5
arahy.Tifrunner.gnm1.ann1.CVPH5H Arachis hypogaea HOM05D003842 ORTHO05D004436 8.5e-32 141.0 115 68.7
Zm00001eb003810 Zea mays HOM05D003842 ORTHO05D004436 1.4e-31 140.2 158 52.5
TPR.G15450 Trifolium pratense HOM05D003842 ORTHO05D004436 1.2e-30 137.1 105 67.6
ClCG04G009540 Citrullus lanatus HOM05D003842 ORTHO05D004436 3.6e-30 135.6 169 51.5
ATR0043G024 Amborella trichopoda HOM05D003842 ORTHO05D004436 7.9e-30 134.4 155 52.3
Nitab4.5_0002535g0020 Nicotiana tabacum HOM05D003842 ORTHO05D004436 1.4e-29 133.7 102 67.6
HPP92_022597 Vanilla planifolia HOM05D003842 ORTHO05D004436 3.0e-29 132.5 154 50.6
Gohir.A11G323300 Gossypium hirsutum HOM05D003842 ORTHO05D004436 3.7e-27 125.6 123 59.3
Ca_08928_v3 Cicer arietinum L. HOM05D003842 ORTHO05D004436 1.5e-25 120.2 123 56.1
Thhalv10016131m.g Eutrema salsugineum HOM05D003842 ORTHO05D004436 7.7e-25 117.9 78 75.6
Lj3A992G55 Lonicera japonica HOM05D003842 ORTHO05D004436 3.3e-20 102.4 137 52.6
DCAR_020802 Daucus carota HOM05D003842 ORTHO05D004436 1.7e-16 90.1 95 51.6
Rhsim03G0088500 Rhododendron simsii HOM05D003842 ORTHO05D004436 2.2e-16 89.7 90 61.1
SEGI_24462 Sequoiadendron giganteum HOM05D003842 ORTHO05D004436 1.2e-14 84.0 98 45.9
Peaxi162Scf00435g01013 Petunia axillaris HOM05D003842 ORTHO05D004436 1.4e-10 70.5 157 40.1
Mapoly0008s0039 Marchantia polymorpha HOM05D003842 ORTHO05D004436 9.1e-10 67.8 131 32.1
Gohir.A09G144350 Gossypium hirsutum HOM05D003842 ORTHO05D004436 4.5e-09 65.5 91 48.4
Gorai.006G160800 Gossypium raimondii HOM05D003842 ORTHO05D004436 4.5e-09 65.5 91 48.4
CBR_g53950 Chara braunii HOM05D003842 ORTHO05D004436 9.4e-07 57.8 108 35.2


User provided reference genes

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