Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.5e-127 459.5 225 100.0
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.9e-95 352.8 228 77.6
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 8.3e-91 337.4 189 84.7
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 8.3e-91 337.4 225 75.1
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 1.4e-90 336.7 228 72.4
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 1.4e-90 336.7 227 75.3
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.9e-90 336.3 188 85.1
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 2.4e-90 335.9 236 72.9
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 5.4e-90 334.7 228 73.2
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 5.4e-90 334.7 225 76.0
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 1.6e-89 333.2 201 80.6
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 2.0e-89 332.8 207 77.3
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.0e-89 332.8 227 74.0
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 3.5e-89 332.0 182 84.1
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 7.8e-89 330.9 225 75.6
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.7e-88 329.7 192 83.9
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 3.0e-88 328.9 184 83.7
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 3.0e-88 328.9 211 74.4
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 3.9e-88 328.6 227 72.2
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 3.9e-88 328.6 228 71.9
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 5.0e-88 328.2 230 72.6
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 6.6e-88 327.8 186 82.8
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 8.6e-88 327.4 225 72.4
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 1.1e-87 327.0 188 84.0
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 3.3e-87 325.5 226 73.5
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 5.6e-87 324.7 227 74.0
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 2.8e-86 322.4 204 77.5
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 2.8e-86 322.4 236 71.6
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 6.2e-86 321.2 233 72.5
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 8.1e-86 320.9 218 74.3
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 1.4e-85 320.1 197 76.1
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 1.8e-85 319.7 188 81.9
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 2.3e-85 319.3 254 65.7
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 3.1e-85 318.9 208 75.5
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 3.1e-85 318.9 252 66.7
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 3.1e-85 318.9 202 76.2
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 4.0e-85 318.5 198 77.8
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 8.9e-85 317.4 191 79.6
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 1.5e-84 316.6 184 82.6
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 1.5e-84 316.6 188 79.3
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 2.0e-84 316.2 181 82.3
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 2.0e-84 316.2 185 81.1
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 2.6e-84 315.8 201 76.1
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 3.4e-84 315.5 204 77.5
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 4.4e-84 315.1 180 84.4
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 4.4e-84 315.1 201 76.1
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 4.4e-84 315.1 187 82.9
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 7.5e-84 314.3 180 82.8
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 1.3e-83 313.5 188 79.3
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 1.3e-83 313.5 199 76.9
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 1.7e-83 313.2 225 71.1
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 3.7e-83 312.0 181 81.8
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 8.3e-83 310.8 190 77.9
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 1.1e-82 310.5 206 74.8
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 1.1e-82 310.5 181 84.0
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.1e-82 310.5 185 81.1
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 1.9e-82 309.7 178 80.9
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 2.4e-82 309.3 185 76.8
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 2.4e-82 309.3 200 73.5
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 3.2e-82 308.9 181 83.4
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 3.2e-82 308.9 199 77.4
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 4.1e-82 308.5 183 80.9
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.2e-81 307.0 198 75.8
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 1.6e-81 306.6 163 90.8
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 4.6e-81 305.1 188 76.6
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 4.6e-81 305.1 172 82.6
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 4.6e-81 305.1 252 64.7
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 1.3e-80 303.5 177 81.4
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 1.7e-80 303.1 202 75.2
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 1.7e-80 303.1 202 75.2
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 5.1e-80 301.6 189 74.1
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 1.1e-79 300.4 205 72.2
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 1.9e-79 299.7 191 78.5
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 1.9e-79 299.7 175 82.9
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 3.3e-79 298.9 200 74.5
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 3.3e-79 298.9 232 67.2
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 4.3e-79 298.5 204 74.0
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 5.6e-79 298.1 222 69.4
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 1.6e-78 296.6 176 81.2
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 3.6e-78 295.4 188 70.7
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 3.6e-78 295.4 209 71.3
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 6.2e-78 294.7 319 53.6
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 4.0e-77 292.0 172 81.4
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 2.2e-75 286.2 156 85.9
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 3.7e-75 285.4 197 70.6
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.1e-74 283.9 182 75.3
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 5.4e-74 281.6 164 79.9
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 9.2e-74 280.8 215 63.7
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 2.7e-73 279.3 158 81.0
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 3.5e-73 278.9 176 76.7
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 3.0e-72 275.8 168 76.8
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 1.6e-70 270.0 237 60.8
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 3.9e-64 248.8 183 66.1
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 3.3e-63 245.7 166 71.1
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 9.6e-63 244.2 147 76.2
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 5.8e-60 235.0 198 65.7
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 6.4e-59 231.5 157 72.0
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 4.2e-58 228.8 118 89.0
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.0e-56 224.2 204 54.9
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 2.3e-56 223.0 181 58.0
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 1.5e-55 220.3 122 80.3
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 8.4e-51 204.5 122 74.6
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 5.5e-50 201.8 146 64.4
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 1.3e-48 197.2 208 49.0
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 8.4e-43 177.9 94 86.2
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 3.2e-42 176.0 115 76.5
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 3.2e-42 176.0 115 76.5
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.6e-41 173.7 118 67.8
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 2.8e-30 136.3 113 64.6
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.3e-24 116.7 65 81.5
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 5.1e-24 115.5 73 74.0
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 6.5e-19 98.6 133 36.1
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 7.2e-18 95.1 126 34.9
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 2.3e-16 90.1 65 67.7
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.1e-15 87.8 112 51.8
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 2.0e-15 87.0 64 67.2
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 2.6e-15 86.7 47 80.9
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 3.7e-14 82.8 136 31.6
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 2.5e-10 70.1 170 26.5
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 4.0e-08 62.8 121 28.1
MD04G1093800 Malus domestica HOM05D006544 ORTHO05D247365 1.3e-06 57.8 35 74.3


User provided reference genes

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