Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28903 Actinidia chinensis HOM05D007373 ORTHO05D009192 1.6e-57 225.7 99 100.0
Actinidia08775 Actinidia chinensis HOM05D007373 ORTHO05D009192 3.8e-56 221.1 99 98.0
Migut.J00499 Erythranthe guttata HOM05D007373 ORTHO05D009192 1.2e-41 172.9 99 71.7
unitig_27.g25376 Utricularia gibba HOM05D007373 ORTHO05D009192 1.9e-39 165.6 99 64.6
Cc06_g04200 Coffea canephora HOM05D007373 ORTHO05D009192 3.6e-38 161.4 99 64.6
Potri.016G092100 Populus trichocarpa HOM05D007373 ORTHO05D009192 3.6e-38 161.4 99 64.6
QL07p043588 Quercus lobata HOM05D007373 ORTHO05D009192 8.0e-38 160.2 99 66.7
PSO017G7276 Papaver somniferum HOM05D007373 ORTHO05D009192 1.8e-37 159.1 99 63.6
PSO478G2855 Papaver somniferum HOM05D007373 ORTHO05D009192 1.8e-37 159.1 99 63.6
Thecc.05G065600 Theobroma cacao HOM05D007373 ORTHO05D009192 4.0e-37 157.9 100 67.0
TWI53G0924 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 4.0e-37 157.9 99 61.6
TAR374G0263 Trochodendron aralioides HOM05D007373 ORTHO05D009192 4.0e-37 157.9 100 64.0
EL10Ac7g16624 Beta vulgaris HOM05D007373 ORTHO05D009192 5.2e-37 157.5 99 63.6
Sabra16G0097700 Salix brachista HOM05D007373 ORTHO05D009192 5.2e-37 157.5 99 62.6
AL3G21090 Arabidopsis lyrata HOM05D007373 ORTHO05D009192 6.8e-37 157.1 99 65.7
AT3G09860 Arabidopsis thaliana HOM05D007373 ORTHO05D009192 6.8e-37 157.1 99 65.7
Dinv35786 Davidia involucrata HOM05D007373 ORTHO05D009192 8.8e-37 156.8 99 63.6
Thhalv10022256m.g Eutrema salsugineum HOM05D007373 ORTHO05D009192 8.8e-37 156.8 99 65.7
TAR629G0480 Trochodendron aralioides HOM05D007373 ORTHO05D009192 8.8e-37 156.8 100 65.0
Lsat_1_v5_gn_6_25141 Lactuca sativa HOM05D007373 ORTHO05D009192 1.2e-36 156.4 100 63.0
THA.LOC104816346 Tarenaya hassleriana HOM05D007373 ORTHO05D009192 1.2e-36 156.4 99 64.6
CSS0040934 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 1.5e-36 156.0 98 66.3
CARHR084370 Cardamine hirsuta HOM05D007373 ORTHO05D009192 2.0e-36 155.6 99 64.6
BcaC05g29497 Brassica carinata HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
BcaC05g29708 Brassica carinata HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
A05p39190 Brassica napus HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
C05p58240 Brassica napus HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
BolC5t34478H Brassica oleracea HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
BraA05t22708Z Brassica rapa HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
CSS0019413 Camellia sinensis var. sinensis HOM05D007373 ORTHO05D009192 2.6e-36 155.2 98 66.3
Carub.0003s0895 Capsella rubella HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
Sp3g08200 Schrenkiella parvula HOM05D007373 ORTHO05D009192 2.6e-36 155.2 99 64.6
CANSAT80G1991 Cannabis sativa HOM05D007373 ORTHO05D009192 4.4e-36 154.5 100 66.0
GSVIVG01025730001 Vitis vinifera HOM05D007373 ORTHO05D009192 4.4e-36 154.5 100 64.0
DCAR_020820 Daucus carota HOM05D007373 ORTHO05D009192 7.5e-36 153.7 99 61.6
MD12G1113600 Malus domestica HOM05D007373 ORTHO05D009192 7.5e-36 153.7 100 64.0
Prupe.6G232500 Prunus persica HOM05D007373 ORTHO05D009192 1.3e-35 152.9 100 63.0
TWI74G0510 Tripterygium wilfordii HOM05D007373 ORTHO05D009192 1.3e-35 152.9 99 60.6
Eucgr.A01684 Eucalyptus grandis HOM05D007373 ORTHO05D009192 1.7e-35 152.5 100 62.0
Lalb_Chr02g0155881 Lupinus albus HOM05D007373 ORTHO05D009192 1.7e-35 152.5 99 61.6
Lalb_Chr02g0155991 Lupinus albus HOM05D007373 ORTHO05D009192 1.7e-35 152.5 99 61.6
MD04G1093900 Malus domestica HOM05D007373 ORTHO05D009192 1.7e-35 152.5 100 63.0
Sed0025593 Sechium edule HOM05D007373 ORTHO05D009192 1.7e-35 152.5 100 63.0
ATR0177G027 Amborella trichopoda HOM05D007373 ORTHO05D009192 2.2e-35 152.1 99 61.6
Solyc09g008155.1 Solanum lycopersicum HOM05D007373 ORTHO05D009192 2.8e-35 151.8 100 63.0
Sopen09g002960 Solanum pennellii HOM05D007373 ORTHO05D009192 2.8e-35 151.8 100 63.0
PGSC0003DMG400003861 Solanum tuberosum HOM05D007373 ORTHO05D009192 2.8e-35 151.8 100 63.0
Atru.chr8.1817 Acer truncatum HOM05D007373 ORTHO05D009192 3.7e-35 151.4 98 62.2
Cfa017601 Carpinus fangiana HOM05D007373 ORTHO05D009192 3.7e-35 151.4 100 65.0
ClCG10G020140 Citrullus lanatus HOM05D007373 ORTHO05D009192 3.7e-35 151.4 100 63.0
ECA233G3432 Erigeron canadensis HOM05D007373 ORTHO05D009192 1.1e-34 149.8 100 60.0
Phvul.007G219900 Phaseolus vulgaris HOM05D007373 ORTHO05D009192 1.4e-34 149.4 100 64.0
CiPaw.09G173000 Carya illinoinensis HOM05D007373 ORTHO05D009192 1.8e-34 149.1 98 63.3
Manes.08G010000 Manihot esculenta HOM05D007373 ORTHO05D009192 1.8e-34 149.1 99 60.6
PGR004G1687 Punica granatum HOM05D007373 ORTHO05D009192 1.8e-34 149.1 100 62.0
Sc02g0001650 Simmondsia chinensis HOM05D007373 ORTHO05D009192 1.8e-34 149.1 100 62.0
COL.COLO4_26968 Corchorus olitorius HOM05D007373 ORTHO05D009192 3.1e-34 148.3 100 62.0
RcHm_v2.0_Chr3g0470161 Rosa chinensis HOM05D007373 ORTHO05D009192 3.1e-34 148.3 100 62.0
Glyma.10G056800 Glycine max HOM05D007373 ORTHO05D009192 4.1e-34 147.9 100 61.0
Gohir.A09G147200 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.1e-34 147.9 100 61.0
Gohir.D09G142800 Gossypium hirsutum HOM05D007373 ORTHO05D009192 4.1e-34 147.9 100 61.0
Gorai.006G164300 Gossypium raimondii HOM05D007373 ORTHO05D009192 4.1e-34 147.9 100 61.0
MBI16_g10844_MAGBIO Magnolia biondii HOM05D007373 ORTHO05D009192 4.1e-34 147.9 97 58.8
Nn3g17468 Nelumbo nucifera HOM05D007373 ORTHO05D009192 5.4e-34 147.5 100 61.0
Lj5g0010566 Lotus japonicus HOM05D007373 ORTHO05D009192 7.0e-34 147.1 100 62.0
HanXRQChr02g0051631 Helianthus annuus HOM05D007373 ORTHO05D009192 9.2e-34 146.7 100 59.0
Peaxi162Scf00701g00211 Petunia axillaris HOM05D007373 ORTHO05D009192 9.2e-34 146.7 100 60.0
CAN.G900.38 Capsicum annuum HOM05D007373 ORTHO05D009192 1.2e-33 146.4 100 59.0
Ciclev10013190m.g Citrus clementina HOM05D007373 ORTHO05D009192 1.2e-33 146.4 100 59.0
Duzib128G1309 Durio zibethinus HOM05D007373 ORTHO05D009192 3.5e-33 144.8 100 60.0
HanXRQChr13g0401061 Helianthus annuus HOM05D007373 ORTHO05D009192 3.5e-33 144.8 100 58.0
Nitab4.5_0002632g0030 Nicotiana tabacum HOM05D007373 ORTHO05D009192 4.5e-33 144.4 100 60.0
CDE10G1255 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 7.8e-33 143.7 98 59.2
CsaV3_3G035970 Cucumis sativus L. HOM05D007373 ORTHO05D009192 7.8e-33 143.7 99 56.6
Peaxi162Scf00311g00515 Petunia axillaris HOM05D007373 ORTHO05D009192 7.8e-33 143.7 95 63.2
FvH4_6g16300 Fragaria vesca HOM05D007373 ORTHO05D009192 1.0e-32 143.3 100 58.0
FAN14G5019 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.0e-32 143.3 100 58.0
FAN02G4061 Fragaria x ananassa HOM05D007373 ORTHO05D009192 1.7e-32 142.5 100 57.0
CDE10G0795 Ceratophyllum demersum HOM05D007373 ORTHO05D009192 2.9e-32 141.7 98 59.2
Glyma.13G143300 Glycine max HOM05D007373 ORTHO05D009192 3.8e-32 141.4 97 59.8
Aqoxy3G03675 Aquilegia oxysepala HOM05D007373 ORTHO05D009192 3.3e-31 138.3 98 59.2
Dinv37313 Davidia involucrata HOM05D007373 ORTHO05D009192 1.2e-30 136.3 80 67.5
BolC1t05427H Brassica oleracea HOM05D007373 ORTHO05D009192 3.0e-29 131.7 87 63.2
Cpa.g.sc56.30 Carica papaya HOM05D007373 ORTHO05D009192 1.2e-28 129.8 80 65.0
TPR.G6865 Trifolium pratense HOM05D007373 ORTHO05D009192 2.6e-28 128.6 98 55.1
SGA_v2.0_scaffold40G15517 Striga asiatica HOM05D007373 ORTHO05D009192 2.2e-27 125.6 110 49.1
Psat6g073000 Pisum sativum HOM05D007373 ORTHO05D009192 3.7e-27 124.8 99 56.6
Medtr1g063360 Medicago truncatula HOM05D007373 ORTHO05D009192 8.3e-27 123.6 99 54.5
AUR62040359 Chenopodium quinoa HOM05D007373 ORTHO05D009192 5.4e-26 120.9 100 57.0
AUR62042495 Chenopodium quinoa HOM05D007373 ORTHO05D009192 5.4e-26 120.9 100 57.0
Aa31LG3G2330 Aethionema arabicum HOM05D007373 ORTHO05D009192 9.2e-26 120.2 169 36.7
Duzib106G1098 Durio zibethinus HOM05D007373 ORTHO05D009192 3.9e-24 114.8 134 41.0
Nitab4.5_0000578g0180 Nicotiana tabacum HOM05D007373 ORTHO05D009192 2.1e-22 109.0 71 62.0
Pp3c23_20900 Physcomitrium patens HOM05D007373 ORTHO05D009192 6.8e-21 104.0 101 48.5
Mapoly0091s0024 Marchantia polymorpha HOM05D007373 ORTHO05D009192 4.1e-18 94.7 101 44.6
AagrBONN_evm.TU.Sc2ySwM_368.2821 Anthoceros agrestis HOM05D007373 ORTHO05D009192 2.0e-17 92.4 102 46.1
SEGI_18158 Sequoiadendron giganteum HOM05D007373 ORTHO05D009192 1.7e-16 89.4 100 41.0
BcaB04g21242 Brassica carinata HOM05D007373 ORTHO05D009192 5.6e-15 84.3 50 64.0
Ah.15g092500 Amaranthus hybridus HOM05D007373 ORTHO05D009192 4.6e-09 64.7 35 65.7
Atru.BG.127.p Acer truncatum HOM05D007373 ORTHO05D009192 5.1e-08 61.2 32 68.8
CBR_g23007 Chara braunii HOM05D007373 ORTHO05D009192 9.5e-07 57.0 82 34.1


User provided reference genes

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