Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia28557 Actinidia chinensis HOM05D056417 ORTHO05D056103 1.4e-72 276.2 141 100.0
Actinidia12832 Actinidia chinensis HOM05D056417 ORTHO05D055864 6.5e-25 117.9 58 100.0
Actinidia31071 Actinidia chinensis HOM05D000222 ORTHO05D007489 1.1e-21 107.1 116 56.0
CSS0024701 Camellia sinensis var. sinensis HOM05D000222 ORTHO05D007489 9.7e-13 77.4 99 50.5
GSVIVG01032137001 Vitis vinifera HOM05D000222 ORTHO05D007489 2.8e-12 75.9 71 57.7
Haze_03175 Corylus avellana HOM05D000222 ORTHO05D007489 4.8e-12 75.1 71 53.5
Cfa010796 Carpinus fangiana HOM05D000222 ORTHO05D007489 6.3e-12 74.7 71 53.5
CiPaw.14G001500 Carya illinoinensis HOM05D000222 ORTHO05D007489 1.1e-11 73.9 70 54.3
Dinv09338 Davidia involucrata HOM05D000222 ORTHO05D007489 3.1e-11 72.4 71 56.3
Rhsim07G0056400 Rhododendron simsii HOM05D000222 ORTHO05D007489 5.3e-11 71.6 99 47.5
Dinv43425 Davidia involucrata HOM05D000222 ORTHO05D007489 9.1e-11 70.9 70 55.7
Manes.10G140200 Manihot esculenta HOM05D000222 ORTHO05D007489 1.2e-10 70.5 71 50.7
Manes.10G140300 Manihot esculenta HOM05D000222 ORTHO05D007489 1.2e-10 70.5 71 52.1
FAN06G0898 Fragaria x ananassa HOM05D000222 ORTHO05D007489 2.6e-10 69.3 71 50.7
Sabra09G0043400 Salix brachista HOM05D000222 ORTHO05D007489 2.6e-10 69.3 108 40.7
Thecc.01G408500 Theobroma cacao HOM05D000222 ORTHO05D007489 2.6e-10 69.3 74 52.7
FAN01G0165 Fragaria x ananassa HOM05D000222 ORTHO05D007489 3.5e-10 68.9 71 50.7
FAN10G3024 Fragaria x ananassa HOM05D000222 ORTHO05D007489 3.5e-10 68.9 71 50.7
RcHm_v2.0_Chr1g0317021 Rosa chinensis HOM05D000222 ORTHO05D007489 3.5e-10 68.9 71 49.3
Ciclev10030700m.g Citrus clementina HOM05D000222 ORTHO05D007489 4.5e-10 68.6 71 50.7
Prupe.2G017300 Prunus persica HOM05D000222 ORTHO05D007489 7.7e-10 67.8 71 49.3
CiPaw.13G006900 Carya illinoinensis HOM05D000222 ORTHO05D007489 1.7e-09 66.6 70 48.6
MD02G1308100 Malus domestica HOM05D000222 ORTHO05D007489 1.7e-09 66.6 71 46.5
vmacro13677 Vaccinium macrocarpon HOM05D000222 ORTHO05D007489 2.2e-09 66.2 72 52.8
DCAR_003220 Daucus carota HOM05D000222 ORTHO05D007489 2.9e-09 65.9 72 51.4
QL04p008088 Quercus lobata HOM05D000222 ORTHO05D007489 2.9e-09 65.9 71 47.9
QL04p008560 Quercus lobata HOM05D000222 ORTHO05D007489 2.9e-09 65.9 71 47.9
Duzib133G1549 Durio zibethinus HOM05D000222 ORTHO05D007489 5.0e-09 65.1 74 48.6
FAN03G0374 Fragaria x ananassa HOM05D000222 ORTHO05D007489 5.0e-09 65.1 72 50.0
Potri.009G059000 Populus trichocarpa HOM05D000222 ORTHO05D007489 1.1e-08 63.9 108 39.8
Duzib268G0145 Durio zibethinus HOM05D000222 ORTHO05D007489 2.5e-08 62.8 74 50.0
TWI53G0693 Tripterygium wilfordii HOM05D000222 ORTHO05D007489 2.5e-08 62.8 104 37.5
Atru.chr11.2600 Acer truncatum HOM05D000222 ORTHO05D007489 5.5e-08 61.6 72 51.4
COL.COLO4_04872 Corchorus olitorius HOM05D000222 ORTHO05D007489 1.2e-07 60.5 74 45.9
MD07G1017600 Malus domestica HOM05D000222 ORTHO05D007489 1.6e-07 60.1 71 46.5
Potri.001G264100 Populus trichocarpa HOM05D000222 ORTHO05D007489 2.1e-07 59.7 71 47.9
Gohir.A08G143300 Gossypium hirsutum HOM05D000222 ORTHO05D007489 3.6e-07 58.9 73 47.9
TWI73G1199 Tripterygium wilfordii HOM05D000222 ORTHO05D007489 3.6e-07 58.9 104 36.5
Glyma.12G008500 Glycine max HOM05D000222 ORTHO05D007489 6.1e-07 58.2 72 48.6
Phvul.011G012700 Phaseolus vulgaris HOM05D000222 ORTHO05D007489 6.1e-07 58.2 72 45.8
Gohir.D08G164300 Gossypium hirsutum HOM05D000222 ORTHO05D007489 1.0e-06 57.4 73 47.9
Gorai.004G171300 Gossypium raimondii HOM05D000222 ORTHO05D007489 1.0e-06 57.4 73 47.9
PGR031G0811 Punica granatum HOM05D000222 ORTHO05D007489 1.8e-06 56.6 73 47.9
TPR.G30168 Trifolium pratense HOM05D000222 ORTHO05D007489 1.8e-06 56.6 72 47.2
TWI09G0834 Tripterygium wilfordii HOM05D000222 ORTHO05D007489 1.8e-06 56.6 104 36.5
Sabra16G0162300 Salix brachista HOM05D000222 ORTHO05D007489 3.0e-06 55.8 70 47.1
Medtr4g039650 Medicago truncatula HOM05D000222 ORTHO05D007489 4.0e-06 55.5 72 47.2
Cpa.g.sc125.14 Carica papaya HOM05D000222 ORTHO05D007489 6.7e-06 54.7 72 47.2
ClCG09G004010 Citrullus lanatus HOM05D000222 ORTHO05D007489 6.7e-06 54.7 70 40.0
Glyma.09G228100 Glycine max HOM05D000222 ORTHO05D007489 8.8e-06 54.3 72 45.8


User provided reference genes

Program Settings