Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia26197 Actinidia chinensis HOM05D001465 ORTHO05D001434 2.1e-41 171.8 78 100.0
Rhsim05G0115100 Rhododendron simsii HOM05D001465 ORTHO05D001434 8.0e-09 63.5 53 58.5
GSVIVG01037101001 Vitis vinifera HOM05D001465 ORTHO05D001434 3.1e-08 61.6 58 53.4
AUR62032473 Chenopodium quinoa HOM05D001465 ORTHO05D001434 1.5e-07 59.3 43 65.1
Sc04g0004690 Simmondsia chinensis HOM05D001465 ORTHO05D001434 2.0e-07 58.9 35 74.3
EL10Ac6g13983 Beta vulgaris HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Haze_14027 Corylus avellana HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Eucgr.F04107 Eucalyptus grandis HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
MBI03_g34266_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Nitab4.5_0002354g0090 Nicotiana tabacum HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Nitab4.5_0003757g0120 Nicotiana tabacum HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Potri.013G089500 Populus trichocarpa HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
Solyc06g063410.4 Solanum lycopersicum HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
TAR381G0579 Trochodendron aralioides HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
TAR381G1164 Trochodendron aralioides HOM05D001465 ORTHO05D001434 2.6e-07 58.5 43 62.8
CSS0046889 Camellia sinensis var. sinensis HOM05D001465 ORTHO05D001434 3.4e-07 58.2 52 59.6
Cfa008029 Carpinus fangiana HOM05D001465 ORTHO05D001434 3.4e-07 58.2 33 75.8
vmacro00905 Vaccinium macrocarpon HOM05D001465 ORTHO05D001434 3.4e-07 58.2 43 60.5
Peaxi162Scf00818g00322 Petunia axillaris HOM05D001465 ORTHO05D001434 4.4e-07 57.8 43 62.8
Atru.chr13.2646 Acer truncatum HOM05D001465 ORTHO05D001434 5.8e-07 57.4 43 60.5
CANSAT43G0002 Cannabis sativa HOM05D001465 ORTHO05D001434 5.8e-07 57.4 43 60.5
Manes.17G016400 Manihot esculenta HOM05D001465 ORTHO05D001434 5.8e-07 57.4 43 60.5
Oeu019657.1 Olea europaea HOM05D001465 ORTHO05D001434 5.8e-07 57.4 42 64.3
PSO170G4334 Papaver somniferum HOM05D001465 ORTHO05D001434 5.8e-07 57.4 43 60.5
Rhsim12G0000300 Rhododendron simsii HOM05D001465 ORTHO05D001434 5.8e-07 57.4 33 72.7
unitig_0.g2004 Utricularia gibba HOM05D001465 ORTHO05D001434 5.8e-07 57.4 42 61.9
vmacro19826 Vaccinium macrocarpon HOM05D001465 ORTHO05D001434 5.8e-07 57.4 51 54.9
Cpa.g.sc21.230 Carica papaya HOM05D001465 ORTHO05D001434 7.5e-07 57.0 43 60.5
Dinv22082 Davidia involucrata HOM05D001465 ORTHO05D001434 7.5e-07 57.0 43 60.5
Actinidia01640 Actinidia chinensis HOM05D001465 ORTHO05D001434 9.8e-07 56.6 49 65.3
ATR1089G161 Amborella trichopoda HOM05D001465 ORTHO05D001434 9.8e-07 56.6 42 61.9
arahy.Tifrunner.gnm1.ann1.CZ2WKN Arachis hypogaea HOM05D001465 ORTHO05D001434 9.8e-07 56.6 42 61.9
arahy.Tifrunner.gnm1.ann1.GYTR0L Arachis hypogaea HOM05D001465 ORTHO05D001434 9.8e-07 56.6 42 61.9
ECA232G1840 Erigeron canadensis HOM05D001465 ORTHO05D001434 9.8e-07 56.6 43 60.5
MBI06_g43031_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 9.8e-07 56.6 42 61.9
Nn5g27153 Nelumbo nucifera HOM05D001465 ORTHO05D001434 9.8e-07 56.6 43 58.1
Nitab4.5_0003247g0050 Nicotiana tabacum HOM05D001465 ORTHO05D001434 9.8e-07 56.6 43 60.5
PGR102G1432 Punica granatum HOM05D001465 ORTHO05D001434 9.8e-07 56.6 43 60.5
Sabra13G0070300 Salix brachista HOM05D001465 ORTHO05D001434 9.8e-07 56.6 33 72.7
vmacro22636 Vaccinium macrocarpon HOM05D001465 ORTHO05D001434 9.8e-07 56.6 37 67.6
VMungo0464G1534 Vigna mungo HOM05D001465 ORTHO05D001434 9.8e-07 56.6 42 61.9
CAN.G14.41 Capsicum annuum HOM05D001465 ORTHO05D001434 1.3e-06 56.2 44 63.6
Migut.C01412 Erythranthe guttata HOM05D001465 ORTHO05D001434 1.3e-06 56.2 42 61.9
Nitab4.5_0005164g0010 Nicotiana tabacum HOM05D001465 ORTHO05D001434 1.3e-06 56.2 43 58.1
Os02g0564400 Oryza sativa ssp. japonica HOM05D001465 ORTHO05D001434 1.3e-06 56.2 43 58.1
Sed0026482 Sechium edule HOM05D001465 ORTHO05D001434 1.3e-06 56.2 32 75.0
Sopen06g022870 Solanum pennellii HOM05D001465 ORTHO05D001434 1.3e-06 56.2 43 60.5
MSTRG.25513 Avicennia marina HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 61.9
FvH4_2g00040 Fragaria vesca HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
FAN19G1444 Fragaria x ananassa HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
FAN20G0336 Fragaria x ananassa HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
FAN20G1666 Fragaria x ananassa HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
FAN20G2066 Fragaria x ananassa HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
FAN24G0653 Fragaria x ananassa HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 59.5
Lj1g0025748 Lotus japonicus HOM05D001465 ORTHO05D001434 1.7e-06 55.8 67 43.3
SGA_v2.0_scaffold118G32657 Striga asiatica HOM05D001465 ORTHO05D001434 1.7e-06 55.8 42 61.9
HPP92_009194 Vanilla planifolia HOM05D001465 ORTHO05D001434 1.7e-06 55.8 43 55.8
Zm00001eb236990 Zea mays HOM05D001465 ORTHO05D001434 1.7e-06 55.8 56 48.2
AagrBONN_evm.TU.Sc2ySwM_340.251 Anthoceros agrestis HOM05D001465 ORTHO05D001434 2.2e-06 55.5 32 71.9
arahy.Tifrunner.gnm1.ann1.ES6UXQ Arachis hypogaea HOM05D001465 ORTHO05D001434 2.2e-06 55.5 38 57.9
CiPaw.04G007500 Carya illinoinensis HOM05D001465 ORTHO05D001434 2.2e-06 55.5 33 72.7
FAN15G3609 Fragaria x ananassa HOM05D001465 ORTHO05D001434 2.2e-06 55.5 32 71.9
Lj2g0018771 Lotus japonicus HOM05D001465 ORTHO05D001434 2.2e-06 55.5 42 59.5
Lalb_Chr02g0149861 Lupinus albus HOM05D001465 ORTHO05D001434 2.2e-06 55.5 43 58.1
Lalb_Chr03g0033241 Lupinus albus HOM05D001465 ORTHO05D001434 2.2e-06 55.5 42 59.5
Prupe.8G000600 Prunus persica HOM05D001465 ORTHO05D001434 2.2e-06 55.5 42 59.5
RcHm_v2.0_Chr6g0249331 Rosa chinensis HOM05D001465 ORTHO05D001434 2.2e-06 55.5 42 59.5
Ah.02g128450 Amaranthus hybridus HOM05D001465 ORTHO05D001434 2.9e-06 55.1 33 69.7
CiPaw.03G011000 Carya illinoinensis HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 71.9
ClCG08G001900 Citrullus lanatus HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 71.9
MELO3C022115.2 Cucumis melo HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 71.9
CsaV3_5G039370 Cucumis sativus L. HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 71.9
PSO170G5192 Papaver somniferum HOM05D001465 ORTHO05D001434 2.9e-06 55.1 55 49.1
PSO210G5562 Papaver somniferum HOM05D001465 ORTHO05D001434 2.9e-06 55.1 43 58.1
Phvul.004G128700 Phaseolus vulgaris HOM05D001465 ORTHO05D001434 2.9e-06 55.1 42 59.5
PGR042G2957 Punica granatum HOM05D001465 ORTHO05D001434 2.9e-06 55.1 43 58.1
SHI02417 Sapria himalayana HOM05D001465 ORTHO05D001434 2.9e-06 55.1 46 54.3
Sed0007092 Sechium edule HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 71.9
TWI18G0635 Tripterygium wilfordii HOM05D001465 ORTHO05D001434 2.9e-06 55.1 32 68.8
Zm00001eb182540 Zea mays HOM05D001465 ORTHO05D001434 2.9e-06 55.1 43 55.8
Zm00001eb244240 Zea mays HOM05D001465 ORTHO05D001434 2.9e-06 55.1 43 55.8
Cc10_g16280 Coffea canephora HOM05D001465 ORTHO05D001434 3.7e-06 54.7 43 58.1
Dinv29278 Davidia involucrata HOM05D001465 ORTHO05D001434 3.7e-06 54.7 49 57.1
PSO063G7118 Papaver somniferum HOM05D001465 ORTHO05D001434 3.7e-06 54.7 55 49.1
Peaxi162Scf00011g01923 Petunia axillaris HOM05D001465 ORTHO05D001434 3.7e-06 54.7 42 59.5
arahy.Tifrunner.gnm1.ann1.C79GQS Arachis hypogaea HOM05D001465 ORTHO05D001434 4.9e-06 54.3 42 57.1
CDE02G4148 Ceratophyllum demersum HOM05D001465 ORTHO05D001434 4.9e-06 54.3 44 63.6
MBI07_g40679_MAGBIO Magnolia biondii HOM05D001465 ORTHO05D001434 4.9e-06 54.3 42 59.5
QL09p008909 Quercus lobata HOM05D001081 ORTHO05D004708 4.9e-06 54.3 40 57.5
Rhsim03G0208900 Rhododendron simsii HOM05D001465 ORTHO05D001434 4.9e-06 54.3 42 59.5
SalBow7G2489 Salvia bowleyana HOM05D001465 ORTHO05D001434 4.9e-06 54.3 42 59.5
HPP92_003719 Vanilla planifolia HOM05D001465 ORTHO05D001434 4.9e-06 54.3 43 60.5
Ah.04g161840 Amaranthus hybridus HOM05D001465 ORTHO05D001434 6.4e-06 53.9 33 69.7
AUR62041126 Chenopodium quinoa HOM05D001465 ORTHO05D001434 6.4e-06 53.9 43 62.8
Ca_07203_v3 Cicer arietinum L. HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 59.5
Ciclev10019167m.g Citrus clementina HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 57.1
Glyma.09G155200 Glycine max HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 57.1
Glyma.16G205700 Glycine max HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 57.1
Medtr6g059910 Medicago truncatula HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 59.5
Psat1g111720 Pisum sativum HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 59.5
TPR.G5802 Trifolium pratense HOM05D001465 ORTHO05D001434 6.4e-06 53.9 42 59.5
Aqoxy6G00021 Aquilegia oxysepala HOM05D001465 ORTHO05D001434 8.3e-06 53.5 43 58.1
Ciclev10019480m.g Citrus clementina HOM05D001465 ORTHO05D001434 8.3e-06 53.5 43 55.8
Glyma.04G235600 Glycine max HOM05D001465 ORTHO05D001434 8.3e-06 53.5 54 51.9
Lalb_Chr06g0168771 Lupinus albus HOM05D001465 ORTHO05D001434 8.3e-06 53.5 42 57.1
Lalb_Chr08g0240231 Lupinus albus HOM05D001465 ORTHO05D001434 8.3e-06 53.5 55 50.9
Lalb_Chr19g0131371 Lupinus albus HOM05D001465 ORTHO05D001434 8.3e-06 53.5 42 57.1


User provided reference genes

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