Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia23488 Actinidia chinensis HOM05D005221 ORTHO05D006355 7.8e-124 447.2 235 100.0
CSS0023930 Camellia sinensis var. sinensis HOM05D005221 ORTHO05D006355 1.6e-81 306.6 234 72.2
Oeu037551.1 Olea europaea HOM05D005221 ORTHO05D006355 3.4e-71 272.3 235 65.1
Rhsim04G0205100 Rhododendron simsii HOM05D005221 ORTHO05D006355 5.9e-71 271.6 237 67.1
QL06p003360 Quercus lobata HOM05D005221 ORTHO05D006355 7.6e-71 271.2 241 67.2
TWI53G0458 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 1.3e-70 270.4 240 65.8
Manes.03G181200 Manihot esculenta HOM05D005221 ORTHO05D006355 1.4e-69 266.9 240 65.4
TAR362G0899 Trochodendron aralioides HOM05D005221 ORTHO05D006355 1.4e-69 266.9 235 63.8
Duzib151G0158 Durio zibethinus HOM05D005221 ORTHO05D006355 4.2e-69 265.4 246 62.6
Cpa.g.sc8.322 Carica papaya HOM05D005221 ORTHO05D006355 9.3e-69 264.2 246 64.2
Cc03_g03470 Coffea canephora HOM05D005221 ORTHO05D006355 9.3e-69 264.2 243 61.7
TWI09G0254 Tripterygium wilfordii HOM05D005221 ORTHO05D006355 1.2e-68 263.8 236 65.3
Potri.010G090700 Populus trichocarpa HOM05D005221 ORTHO05D006355 2.1e-68 263.1 239 66.5
Thecc.04G227300 Theobroma cacao HOM05D005221 ORTHO05D006355 4.6e-68 261.9 243 64.2
RcHm_v2.0_Chr4g0416801 Rosa chinensis HOM05D005221 ORTHO05D006355 3.3e-66 255.8 240 61.2
Potri.008G150300 Populus trichocarpa HOM05D005221 ORTHO05D006355 1.3e-65 253.8 239 63.2
Manes.15G026700 Manihot esculenta HOM05D005221 ORTHO05D006355 1.6e-65 253.4 238 63.0
FAN07G2107 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.8e-65 252.7 243 62.1
FAN12G4146 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.8e-65 252.7 243 61.7
FvH4_4g15060 Fragaria vesca HOM05D005221 ORTHO05D006355 3.7e-65 252.3 237 62.4
Cfa015617 Carpinus fangiana HOM05D005221 ORTHO05D006355 4.8e-65 251.9 240 62.9
FAN22G0945 Fragaria x ananassa HOM05D005221 ORTHO05D006355 1.8e-64 250.0 246 60.6
COL.COLO4_06196 Corchorus olitorius HOM05D005221 ORTHO05D006355 4.1e-64 248.8 238 62.2
Sabra10G0052800 Salix brachista HOM05D005221 ORTHO05D006355 1.2e-63 247.3 239 62.3
CiPaw.01G163700 Carya illinoinensis HOM05D005221 ORTHO05D006355 2.6e-63 246.1 223 65.9
Duzib212G0790 Durio zibethinus HOM05D005221 ORTHO05D006355 2.6e-63 246.1 241 63.5
Nn4g26263 Nelumbo nucifera HOM05D005221 ORTHO05D006355 5.9e-63 245.0 231 60.2
Nitab4.5_0000260g0100 Nicotiana tabacum HOM05D005221 ORTHO05D006355 1.7e-62 243.4 234 60.3
Sabra08G0114400 Salix brachista HOM05D005221 ORTHO05D006355 1.4e-61 240.4 239 60.3
CAN.G668.8 Capsicum annuum HOM05D005221 ORTHO05D006355 5.5e-61 238.4 237 59.1
Sed0012211 Sechium edule HOM05D005221 ORTHO05D006355 5.5e-61 238.4 243 59.3
Sed0008919 Sechium edule HOM05D005221 ORTHO05D006355 7.2e-61 238.0 246 59.8
Prupe.1G155500 Prunus persica HOM05D005221 ORTHO05D006355 9.4e-61 237.7 241 58.9
MD16G1188800 Malus domestica HOM05D005221 ORTHO05D006355 2.1e-60 236.5 238 59.2
Nitab4.5_0001545g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 2.1e-60 236.5 235 58.7
Peaxi162Scf00437g00052 Petunia axillaris HOM05D005221 ORTHO05D006355 2.7e-60 236.1 236 58.9
Lj5g0028012 Lotus japonicus HOM05D005221 ORTHO05D006355 3.0e-59 232.6 243 59.3
CiPaw.02G095300 Carya illinoinensis HOM05D005221 ORTHO05D006355 3.9e-59 232.3 240 59.6
PGSC0003DMG400031851 Solanum tuberosum HOM05D005221 ORTHO05D006355 1.5e-58 230.3 237 57.4
Dinv38425 Davidia involucrata HOM05D005221 ORTHO05D006355 2.5e-58 229.6 169 74.6
MSTRG.21844 Avicennia marina HOM05D005221 ORTHO05D006355 3.3e-58 229.2 239 59.8
MD13G1188400 Malus domestica HOM05D005221 ORTHO05D006355 4.3e-58 228.8 238 57.6
Sopen09g030550 Solanum pennellii HOM05D005221 ORTHO05D006355 4.3e-58 228.8 236 57.6
MELO3C014491.2 Cucumis melo HOM05D005221 ORTHO05D006355 7.4e-58 228.0 231 60.2
Duzib052G0196 Durio zibethinus HOM05D005221 ORTHO05D006355 1.3e-57 227.3 226 58.4
Ca_10924_v3 Cicer arietinum L. HOM05D005221 ORTHO05D006355 1.7e-57 226.9 262 54.6
Aqoxy2G03348 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 2.2e-57 226.5 237 57.0
DCAR_002395 Daucus carota HOM05D005221 ORTHO05D006355 4.8e-57 225.3 228 60.5
Ciclev10005615m.g Citrus clementina HOM05D005221 ORTHO05D006355 6.3e-57 224.9 247 57.9
Nn1g02242 Nelumbo nucifera HOM05D005221 ORTHO05D006355 1.4e-56 223.8 244 57.8
ClCG06G006000 Citrullus lanatus HOM05D005221 ORTHO05D006355 3.1e-56 222.6 225 60.0
Solyc09g075740.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 3.1e-56 222.6 236 55.5
DCAR_024599 Daucus carota HOM05D005221 ORTHO05D006355 4.1e-56 222.2 229 59.8
Peaxi162Scf00642g00022 Petunia axillaris HOM05D005221 ORTHO05D006355 2.0e-55 219.9 233 58.4
TPR.G5529 Trifolium pratense HOM05D005221 ORTHO05D006355 4.5e-55 218.8 232 57.8
Medtr1g104840 Medicago truncatula HOM05D005221 ORTHO05D006355 5.9e-55 218.4 245 56.3
Glyma.10G249900 Glycine max HOM05D005221 ORTHO05D006355 7.7e-55 218.0 260 54.2
CAN.G873.5 Capsicum annuum HOM05D005221 ORTHO05D006355 1.3e-54 217.2 232 55.2
Sopen06g019400 Solanum pennellii HOM05D005221 ORTHO05D006355 1.3e-54 217.2 231 56.3
Phvul.007G054700 Phaseolus vulgaris HOM05D005221 ORTHO05D006355 1.7e-54 216.9 253 54.2
PGSC0003DMG400011822 Solanum tuberosum HOM05D005221 ORTHO05D006355 2.2e-54 216.5 233 55.8
Solyc06g054280.1 Solanum lycopersicum HOM05D005221 ORTHO05D006355 2.9e-54 216.1 231 56.3
Glyma.20G143700 Glycine max HOM05D005221 ORTHO05D006355 1.4e-53 213.8 252 53.2
CsaV3_6G038280 Cucumis sativus L. HOM05D005221 ORTHO05D006355 1.9e-53 213.4 236 56.8
VMungo0720G0147 Vigna mungo HOM05D005221 ORTHO05D006355 5.5e-53 211.8 252 52.8
DCAR_030618 Daucus carota HOM05D005221 ORTHO05D006355 9.4e-53 211.1 215 55.8
ECA234G2268 Erigeron canadensis HOM05D005221 ORTHO05D006355 6.1e-52 208.4 235 53.2
FAN17G2349 Fragaria x ananassa HOM05D005221 ORTHO05D006355 2.3e-51 206.5 235 51.9
Nitab4.5_0000321g0080 Nicotiana tabacum HOM05D005221 ORTHO05D006355 8.8e-51 204.5 227 53.7
EL10As3g23360 Beta vulgaris HOM05D005221 ORTHO05D006355 5.7e-50 201.8 253 53.8
TAR636G2071 Trochodendron aralioides HOM05D002203 ORTHO05D002647 5.7e-50 201.8 198 60.1
Lj3P740T18 Lonicera japonica HOM05D005221 ORTHO05D006355 7.4e-50 201.4 239 51.5
Gohir.A09G214300 Gossypium hirsutum HOM05D005221 ORTHO05D006355 2.8e-49 199.5 244 54.1
CANSAT78G1299 Cannabis sativa HOM05D005221 ORTHO05D006355 4.8e-49 198.7 278 50.4
Gohir.D09G216800 Gossypium hirsutum HOM05D005221 ORTHO05D006355 4.8e-49 198.7 242 52.9
Sc19g0004310 Simmondsia chinensis HOM05D005221 ORTHO05D006355 8.2e-49 198.0 251 51.0
Gorai.006G237300 Gossypium raimondii HOM05D005221 ORTHO05D006355 2.4e-48 196.4 242 52.5
Sc13g0004240 Simmondsia chinensis HOM05D005221 ORTHO05D006355 4.1e-48 195.7 267 50.2
Lsat_1_v5_gn_5_148500 Lactuca sativa HOM05D005221 ORTHO05D006355 1.0e-46 191.0 230 50.9
Oeu029026.1 Olea europaea HOM05D005221 ORTHO05D006355 2.2e-46 189.9 167 59.9
SGA_v2.0_scaffold10G05107 Striga asiatica HOM05D005221 ORTHO05D006355 3.8e-46 189.1 245 50.6
Migut.N00171 Erythranthe guttata HOM05D005221 ORTHO05D006355 6.5e-46 188.3 259 49.0
HanXRQChr10g0296561 Helianthus annuus HOM05D005221 ORTHO05D006355 8.5e-46 188.0 237 48.5
MBI17_g31753_MAGBIO Magnolia biondii HOM05D005221 ORTHO05D006355 8.5e-46 188.0 218 50.0
HanXRQChr04g0110301 Helianthus annuus HOM05D005221 ORTHO05D006355 9.4e-45 184.5 229 52.8
Hma1.2p1_0511F.1_g168910 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 2.1e-44 183.3 234 50.4
THA.LOC104802759 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 2.7e-44 183.0 239 50.6
PGR142G0441 Punica granatum HOM05D005221 ORTHO05D006355 3.6e-44 182.6 280 49.6
Lalb_Chr06g0160581 Lupinus albus HOM05D005221 ORTHO05D006355 8.0e-44 181.4 247 50.6
Aqoxy5G00503 Aquilegia oxysepala HOM05D005221 ORTHO05D006355 3.0e-43 179.5 241 49.4
Eucgr.B01092 Eucalyptus grandis HOM05D005221 ORTHO05D006355 1.3e-41 174.1 278 43.2
MSTRG.4014 Avicennia marina HOM05D005221 ORTHO05D006355 2.4e-40 169.9 238 50.0
Nitab4.5_0007609g0020 Nicotiana tabacum HOM05D005221 ORTHO05D006355 7.7e-39 164.9 203 52.2
THA.LOC104818779 Tarenaya hassleriana HOM05D005221 ORTHO05D006355 1.0e-38 164.5 234 47.9
Carub.0003s0539 Capsella rubella HOM05D005221 ORTHO05D006355 5.0e-38 162.2 234 45.7
AL3G16790 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 8.5e-38 161.4 237 43.9
AT3G05980 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 1.1e-37 161.0 236 42.8
A05p42050 Brassica napus HOM05D005221 ORTHO05D006355 9.4e-37 157.9 225 43.6
C05p61280 Brassica napus HOM05D005221 ORTHO05D006355 1.2e-36 157.5 229 45.0
BolC5t34787H Brassica oleracea HOM05D005221 ORTHO05D006355 1.2e-36 157.5 229 45.0
BcaC05g30072 Brassica carinata HOM05D005221 ORTHO05D006355 1.6e-36 157.1 229 42.8
BraA05t22925Z Brassica rapa HOM05D005221 ORTHO05D006355 3.6e-36 156.0 229 43.7
Aa31LG5G16450 Aethionema arabicum HOM05D005221 ORTHO05D006355 4.7e-36 155.6 216 46.8
Hma1.2p1_0995F.1_g245620 Hydrangea macrophylla HOM05D005221 ORTHO05D006355 4.7e-36 155.6 149 55.0
BraA03t10262Z Brassica rapa HOM05D005221 ORTHO05D006355 8.0e-36 154.8 244 44.7
BolC3t13571H Brassica oleracea HOM05D005221 ORTHO05D006355 6.8e-35 151.8 226 44.7
PGR004G1499 Punica granatum HOM05D005221 ORTHO05D006355 6.8e-35 151.8 271 42.1
Atru.chr4.2515 Acer truncatum HOM05D005221 ORTHO05D006355 2.0e-34 150.2 248 45.6
BraA01t04457Z Brassica rapa HOM05D005221 ORTHO05D006355 2.0e-34 150.2 235 41.7
BolC9t58548H Brassica oleracea HOM05D005221 ORTHO05D006355 2.6e-34 149.8 254 41.3
BcaC09g47869 Brassica carinata HOM05D005221 ORTHO05D006355 3.4e-34 149.4 225 44.9
Lj6P597T84 Lonicera japonica HOM05D005221 ORTHO05D006355 5.7e-34 148.7 172 51.7
BolC1t05645H Brassica oleracea HOM05D005221 ORTHO05D006355 7.5e-34 148.3 227 44.5
Thhalv10021379m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 1.3e-33 147.5 238 41.6
CARHR080490 Cardamine hirsuta HOM05D005221 ORTHO05D006355 2.2e-33 146.7 227 43.2
A03p09440 Brassica napus HOM05D005221 ORTHO05D006355 1.1e-32 144.4 230 45.2
A10p20340 Brassica napus HOM05D005221 ORTHO05D006355 4.1e-32 142.5 254 40.2
BraA10t44105Z Brassica rapa HOM05D005221 ORTHO05D006355 4.1e-32 142.5 254 40.2
Sp3g04920 Schrenkiella parvula HOM05D005221 ORTHO05D006355 4.1e-32 142.5 237 42.2
BcaB01g05141 Brassica carinata HOM05D005221 ORTHO05D006355 9.1e-32 141.4 225 44.0
BcaC04g18576 Brassica carinata HOM05D005221 ORTHO05D006355 1.6e-31 140.6 256 39.8
C09p56940 Brassica napus HOM05D005221 ORTHO05D006355 1.6e-31 140.6 256 39.8
C03p11020 Brassica napus HOM05D005221 ORTHO05D006355 2.7e-31 139.8 226 43.4
BcaB01g04866 Brassica carinata HOM05D005221 ORTHO05D006355 3.5e-31 139.4 227 41.4
Ah.04g154490 Amaranthus hybridus HOM05D005221 ORTHO05D006355 6.5e-30 135.2 186 50.0
AT5G19340 Arabidopsis thaliana HOM05D005221 ORTHO05D006355 1.6e-28 130.6 258 38.8
Thhalv10016073m.g Eutrema salsugineum HOM05D005221 ORTHO05D006355 6.1e-28 128.6 232 41.8
Carub.0006s1768 Capsella rubella HOM05D005221 ORTHO05D006355 6.8e-27 125.2 244 39.8
arahy.Tifrunner.gnm1.ann1.0RM5BV Arachis hypogaea HOM05D005221 ORTHO05D006355 2.6e-26 123.2 249 39.0
PSO302G0248 Papaver somniferum HOM05D005221 ORTHO05D006355 1.1e-24 117.9 147 48.3
Sp6g25070 Schrenkiella parvula HOM05D005221 ORTHO05D006355 9.2e-24 114.8 231 38.5
AL6G30830 Arabidopsis lyrata HOM05D005221 ORTHO05D006355 1.6e-23 114.0 238 37.8
BcaB08g36581 Brassica carinata HOM05D005221 ORTHO05D006355 1.6e-23 114.0 248 37.1
SGA_v2.0_scaffold237G43792 Striga asiatica HOM05D005221 ORTHO05D006355 1.0e-22 111.3 240 36.2
CARHR193620 Cardamine hirsuta HOM05D005221 ORTHO05D006355 1.7e-22 110.5 251 36.7
BcaNung07026 Brassica carinata HOM05D005221 ORTHO05D006355 2.5e-21 106.7 155 40.6
AUR62038640 Chenopodium quinoa HOM05D005221 ORTHO05D006355 3.3e-21 106.3 154 46.8
SGA_v2.0_scaffold39G15291 Striga asiatica HOM05D005221 ORTHO05D006355 8.0e-20 101.7 217 33.6
Nn5g28878 Nelumbo nucifera HOM05D005221 ORTHO05D006355 3.4e-18 96.3 92 54.3
Psat6g208720 Pisum sativum HOM05D005221 ORTHO05D006355 7.5e-18 95.1 85 71.8
Nn3g20708 Nelumbo nucifera HOM05D005221 ORTHO05D006355 1.6e-15 87.4 92 53.3
AUR62038093 Chenopodium quinoa HOM05D005221 ORTHO05D006355 5.0e-14 82.4 149 39.6
ATR0626G396 Amborella trichopoda HOM05D005221 ORTHO05D006355 7.5e-10 68.6 142 35.9
Nn1g04890 Nelumbo nucifera HOM05D002458 ORTHO05D002603 1.3e-09 67.8 186 31.7
TAR628G0915 Trochodendron aralioides HOM05D002458 ORTHO05D002603 2.2e-09 67.0 185 31.9
TAR376G0738 Trochodendron aralioides HOM05D002458 ORTHO05D002603 3.5e-07 59.7 192 30.2
Nn5g30245 Nelumbo nucifera HOM05D002458 ORTHO05D002603 1.0e-06 58.2 147 34.7
Potri.007G042600 Populus trichocarpa HOM05D002458 ORTHO05D002603 1.0e-06 58.2 136 32.4
ATR1098G156 Amborella trichopoda HOM05D003370 ORTHO05D003848 2.3e-06 57.0 157 31.8
Manes.12G102900 Manihot esculenta HOM05D002458 ORTHO05D002603 3.9e-06 56.2 131 33.6
Sopen02g015150 Solanum pennellii HOM05D002458 ORTHO05D002603 3.9e-06 56.2 133 31.6
Nn1g06084 Nelumbo nucifera HOM05D005221 ORTHO05D006355 6.6e-06 55.5 54 51.9
Actinidia16500 Actinidia chinensis HOM05D002458 ORTHO05D002603 8.6e-06 55.1 143 31.5


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