Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia21403 Actinidia chinensis HOM05D002853 ORTHO05D003030 1.3e-77 293.1 159 100.0
CSS0022639 Camellia sinensis var. sinensis HOM05D002853 ORTHO05D003030 5.4e-36 154.8 154 64.9
vmacro02406 Vaccinium macrocarpon HOM05D002853 ORTHO05D003030 9.6e-25 117.5 153 54.9
TAR636G0059 Trochodendron aralioides HOM05D002853 ORTHO05D003030 4.7e-24 115.2 154 52.6
TAR365G0474 Trochodendron aralioides HOM05D002853 ORTHO05D003030 5.2e-23 111.7 153 51.6
QL12p020012 Quercus lobata HOM05D002853 ORTHO05D003030 9.9e-22 107.5 152 52.6
CiPaw.07G117100 Carya illinoinensis HOM05D002853 ORTHO05D003030 2.1e-19 99.8 151 48.3
Dinv15192 Davidia involucrata HOM05D002853 ORTHO05D003030 2.7e-19 99.4 154 50.0
Atru.chr5.1005 Acer truncatum HOM05D002853 ORTHO05D003030 3.5e-19 99.0 159 47.8
QL06p011649 Quercus lobata HOM05D002853 ORTHO05D003030 1.3e-18 97.1 141 48.9
MD16G1157000 Malus domestica HOM05D002853 ORTHO05D003030 1.7e-18 96.7 137 51.1
Lj2C1205G3 Lonicera japonica HOM05D002853 ORTHO05D003030 5.1e-18 95.1 150 48.7
Lj3C830T2 Lonicera japonica HOM05D002853 ORTHO05D003030 6.6e-18 94.7 143 51.0
Ciclev10018465m.g Citrus clementina HOM05D002853 ORTHO05D003030 1.1e-17 94.0 151 45.0
Eucgr.H04037 Eucalyptus grandis HOM05D002853 ORTHO05D003030 1.9e-17 93.2 162 44.4
CDE02G1009 Ceratophyllum demersum HOM05D002853 ORTHO05D003030 3.3e-17 92.4 159 44.7
Haze_05037 Corylus avellana HOM05D002853 ORTHO05D003030 7.3e-17 91.3 148 49.3
Potri.010G142700 Populus trichocarpa HOM05D002853 ORTHO05D003030 9.6e-17 90.9 141 51.8
Duzib133G0460 Durio zibethinus HOM05D002853 ORTHO05D003030 3.6e-16 89.0 149 47.0
Potri.008G106800 Populus trichocarpa HOM05D002853 ORTHO05D003030 1.1e-15 87.4 140 49.3
arahy.Tifrunner.gnm1.ann1.IZQK6X Arachis hypogaea HOM05D002853 ORTHO05D003030 1.4e-15 87.0 160 41.2
FvH4_4g19490 Fragaria vesca HOM05D002853 ORTHO05D003030 1.8e-15 86.7 140 47.9
Oeu019967.2 Olea europaea HOM05D002853 ORTHO05D003030 1.8e-15 86.7 140 47.9
Peaxi162Scf00228g00019 Petunia axillaris HOM05D002853 ORTHO05D003030 2.4e-15 86.3 142 45.8
Cfa005803 Carpinus fangiana HOM05D002853 ORTHO05D003030 3.1e-15 85.9 149 47.7
FAN12G1129 Fragaria x ananassa HOM05D002853 ORTHO05D003030 4.0e-15 85.5 140 47.9
SalBow8G2160 Salvia bowleyana HOM05D002853 ORTHO05D003030 5.3e-15 85.1 136 44.1
SalBow8G3995 Salvia bowleyana HOM05D002853 ORTHO05D003030 5.3e-15 85.1 136 44.1
arahy.Tifrunner.gnm1.ann1.KK5QZD Arachis hypogaea HOM05D002853 ORTHO05D003030 6.9e-15 84.7 122 47.5
Actinidia15596 Actinidia chinensis HOM05D002853 ORTHO05D003030 1.5e-14 83.6 154 43.5
FAN07G2367 Fragaria x ananassa HOM05D002853 ORTHO05D003030 1.5e-14 83.6 140 47.1
RcHm_v2.0_Chr4g0424601 Rosa chinensis HOM05D002853 ORTHO05D003030 2.6e-14 82.8 140 46.4
Haze_01279 Corylus avellana HOM05D002853 ORTHO05D003030 5.8e-14 81.6 142 47.9
Sabra10G0110600 Salix brachista HOM05D002853 ORTHO05D003030 5.8e-14 81.6 143 48.3
Rhsim04G0234300 Rhododendron simsii HOM05D002853 ORTHO05D003030 9.9e-14 80.9 148 40.5
Migut.G00045 Erythranthe guttata HOM05D002853 ORTHO05D003030 1.3e-13 80.5 144 44.4
CANSAT25G1051 Cannabis sativa HOM05D002853 ORTHO05D003030 1.7e-13 80.1 150 40.0
Migut.D00085 Erythranthe guttata HOM05D002853 ORTHO05D003030 1.7e-13 80.1 146 43.8
Lj6g0018239 Lotus japonicus HOM05D002853 ORTHO05D003030 1.7e-13 80.1 151 44.4
MD13G1156100 Malus domestica HOM05D002853 ORTHO05D003030 1.7e-13 80.1 139 47.5
Actinidia40363 Actinidia chinensis HOM05D002853 ORTHO05D003030 2.2e-13 79.7 162 42.0
CDE09G0366 Ceratophyllum demersum HOM05D002853 ORTHO05D003030 2.2e-13 79.7 159 43.4
Phvul.009G256200 Phaseolus vulgaris HOM05D002853 ORTHO05D003030 2.2e-13 79.7 152 42.8
Nitab4.5_0000180g0150 Nicotiana tabacum HOM05D002853 ORTHO05D003030 3.8e-13 79.0 110 51.8
CiPaw.01G139600 Carya illinoinensis HOM05D002853 ORTHO05D003030 4.9e-13 78.6 151 43.0
Glyma.10G013500 Glycine max HOM05D002853 ORTHO05D003030 6.4e-13 78.2 133 43.6
Cfa015336 Carpinus fangiana HOM05D002853 ORTHO05D003030 8.4e-13 77.8 142 47.2
Glyma.15G142600 Glycine max HOM05D002853 ORTHO05D003030 8.4e-13 77.8 115 49.6
Hma1.2p1_0212F.1_g089950 Hydrangea macrophylla HOM05D002853 ORTHO05D003030 8.4e-13 77.8 146 43.8
Nn3g21683 Nelumbo nucifera HOM05D002853 ORTHO05D003030 8.4e-13 77.8 142 44.4
Nitab4.5_0013003g0010 Nicotiana tabacum HOM05D002853 ORTHO05D003030 8.4e-13 77.8 110 51.8
VMungo1309G1612 Vigna mungo HOM05D002853 ORTHO05D003030 8.4e-13 77.8 163 41.7
Aqoxy2G02774 Aquilegia oxysepala HOM05D002853 ORTHO05D003030 1.1e-12 77.4 126 44.4
TWI53G0106 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 1.1e-12 77.4 141 46.1
Gorai.006G079300 Gossypium raimondii HOM05D002853 ORTHO05D003030 1.4e-12 77.0 171 42.1
Potri.014G121100 Populus trichocarpa HOM05D002853 ORTHO05D003030 1.9e-12 76.6 151 43.0
TWI36G0696 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 2.4e-12 76.3 140 41.4
Gohir.A09G065600 Gossypium hirsutum HOM05D002853 ORTHO05D003030 3.2e-12 75.9 171 42.1
TWI73G0899 Tripterygium wilfordii HOM05D002853 ORTHO05D003030 3.2e-12 75.9 153 43.1
PSO170G5187 Papaver somniferum HOM05D002853 ORTHO05D003030 4.2e-12 75.5 148 40.5
CAN.G197.2 Capsicum annuum HOM05D002853 ORTHO05D003030 5.4e-12 75.1 108 50.0
Gohir.D09G064500 Gossypium hirsutum HOM05D002853 ORTHO05D003030 7.1e-12 74.7 152 44.7
RcHm_v2.0_Chr7g0241591 Rosa chinensis HOM05D002853 ORTHO05D003030 9.3e-12 74.3 145 40.0
Sed0009870 Sechium edule HOM05D002853 ORTHO05D003030 9.3e-12 74.3 155 42.6
GSVIVG01028117001 Vitis vinifera HOM05D002853 ORTHO05D003030 1.2e-11 73.9 131 45.8
Lalb_Chr18g0058821 Lupinus albus HOM05D002853 ORTHO05D003030 1.6e-11 73.6 114 45.6
Glyma.09G037300 Glycine max HOM05D002853 ORTHO05D003030 2.1e-11 73.2 160 40.0
AUR62011812 Chenopodium quinoa HOM05D002853 ORTHO05D003030 2.7e-11 72.8 146 41.8
CsaV3_3G015110 Cucumis sativus L. HOM05D002853 ORTHO05D003030 2.7e-11 72.8 152 40.1
PSO357G0469 Papaver somniferum HOM05D002853 ORTHO05D003030 3.5e-11 72.4 148 39.9
MELO3C006708.2 Cucumis melo HOM05D002853 ORTHO05D003030 4.6e-11 72.0 152 40.1
Hma1.2p1_0013F.1_g008710 Hydrangea macrophylla HOM05D002853 ORTHO05D003030 6.0e-11 71.6 109 52.3
Oeu005863.1 Olea europaea HOM05D002853 ORTHO05D003030 6.0e-11 71.6 148 41.9
COL.COLO4_23236 Corchorus olitorius HOM05D002853 ORTHO05D003030 1.0e-10 70.9 147 44.2
AUR62024656 Chenopodium quinoa HOM05D002853 ORTHO05D003030 1.7e-10 70.1 146 41.1
Glyma.02G012900 Glycine max HOM05D002853 ORTHO05D003030 2.3e-10 69.7 133 42.9
Ca_01869_v3 Cicer arietinum L. HOM05D002853 ORTHO05D003030 3.0e-10 69.3 115 47.0
ClCG05G006470 Citrullus lanatus HOM05D002853 ORTHO05D003030 3.0e-10 69.3 149 39.6
GSVIVG01035014001 Vitis vinifera HOM05D002853 ORTHO05D003030 3.0e-10 69.3 159 41.5
DCAR_012355 Daucus carota HOM05D002853 ORTHO05D003030 3.9e-10 68.9 139 43.9
Atru.chr4.3027 Acer truncatum HOM05D002853 ORTHO05D003030 5.1e-10 68.6 142 43.7
CANSAT78G0527 Cannabis sativa HOM05D002853 ORTHO05D003030 5.1e-10 68.6 159 39.6
FvH4_5g39310 Fragaria vesca HOM05D002853 ORTHO05D003030 8.7e-10 67.8 146 39.7
FAN08G3516 Fragaria x ananassa HOM05D002853 ORTHO05D003030 8.7e-10 67.8 146 39.7
FAN13G1497 Fragaria x ananassa HOM05D002853 ORTHO05D003030 8.7e-10 67.8 146 39.7
Eucgr.H01047 Eucalyptus grandis HOM05D002853 ORTHO05D003030 1.1e-09 67.4 148 38.5
Sc25g0003380 Simmondsia chinensis HOM05D002853 ORTHO05D003030 1.5e-09 67.0 152 40.1
AUR62016129 Chenopodium quinoa HOM05D002853 ORTHO05D003030 1.9e-09 66.6 154 39.6
Hund02939 Selenicereus undatus HOM05D002853 ORTHO05D003030 2.5e-09 66.2 143 40.6
FAN04G0032 Fragaria x ananassa HOM05D002853 ORTHO05D003030 3.3e-09 65.9 146 39.0
MSTRG.10145 Avicennia marina HOM05D002853 ORTHO05D003030 5.6e-09 65.1 149 39.6
Phvul.007G214600 Phaseolus vulgaris HOM05D002853 ORTHO05D003030 9.6e-09 64.3 144 39.6
Duzib052G0993 Durio zibethinus HOM05D002853 ORTHO05D003030 1.3e-08 63.9 121 42.1
Lalb_Chr21g0309571 Lupinus albus HOM05D002853 ORTHO05D003030 1.3e-08 63.9 146 40.4
Psat6g161760 Pisum sativum HOM05D002853 ORTHO05D003030 1.3e-08 63.9 139 39.6
ATR0706G194 Amborella trichopoda HOM05D002853 ORTHO05D003030 1.6e-08 63.5 112 47.3
Lj5g0013053 Lotus japonicus HOM05D002853 ORTHO05D003030 2.1e-08 63.2 127 44.1
TPR.G19779 Trifolium pratense HOM05D002853 ORTHO05D003030 2.1e-08 63.2 142 38.0
EL10As5g23526 Beta vulgaris HOM05D002853 ORTHO05D003030 2.8e-08 62.8 146 39.7
FAN18G1298 Fragaria x ananassa HOM05D002853 ORTHO05D003030 2.8e-08 62.8 146 38.4
Thecc.01G312900 Theobroma cacao HOM05D002853 ORTHO05D003030 3.6e-08 62.4 146 40.4
AUR62041402 Chenopodium quinoa HOM05D002853 ORTHO05D003030 1.1e-07 60.8 152 36.8
MD11G1314700 Malus domestica HOM05D002853 ORTHO05D003030 1.4e-07 60.5 125 40.0
Prupe.8G271800 Prunus persica HOM05D002853 ORTHO05D003030 2.4e-07 59.7 135 35.6
Manes.01G227500 Manihot esculenta HOM05D002853 ORTHO05D003030 3.1e-07 59.3 165 38.8
MD03G1295600 Malus domestica HOM05D002853 ORTHO05D003030 4.0e-07 58.9 128 39.8
Psat1g161960 Pisum sativum HOM05D002853 ORTHO05D003030 4.0e-07 58.9 150 38.7
Hund03116 Selenicereus undatus HOM05D002853 ORTHO05D003030 6.9e-07 58.2 114 40.4
PGR119G0408 Punica granatum HOM05D002853 ORTHO05D003030 9.0e-07 57.8 141 35.5
TPR.G5759 Trifolium pratense HOM05D002853 ORTHO05D003030 9.0e-07 57.8 117 42.7
BcaNung02602 Brassica carinata HOM05D002853 ORTHO05D003030 1.2e-06 57.4 164 37.8
C07p39900 Brassica napus HOM05D002853 ORTHO05D003030 1.2e-06 57.4 164 37.8
BolC7t44519H Brassica oleracea HOM05D002853 ORTHO05D003030 1.2e-06 57.4 164 37.8
Sc17g0000460 Simmondsia chinensis HOM05D002853 ORTHO05D003030 1.2e-06 57.4 147 35.4
Duzib151G0933 Durio zibethinus HOM05D002853 ORTHO05D003030 1.5e-06 57.0 148 38.5
Lalb_Chr02g0146801 Lupinus albus HOM05D002853 ORTHO05D003030 1.5e-06 57.0 135 40.0
unitig_37.g12411 Utricularia gibba HOM05D002853 ORTHO05D003030 1.5e-06 57.0 148 36.5
HPP92_002025 Vanilla planifolia HOM05D002853 ORTHO05D003030 1.5e-06 57.0 104 45.2
ECA246G4449 Erigeron canadensis HOM05D002853 ORTHO05D003030 2.6e-06 56.2 108 43.5
Thecc.04G297900 Theobroma cacao HOM05D002853 ORTHO05D003030 4.5e-06 55.5 75 52.0
Nitab4.5_0001301g0060 Nicotiana tabacum HOM05D002853 ORTHO05D003030 7.6e-06 54.7 144 39.6
EL10Ac3g05463 Beta vulgaris HOM05D002853 ORTHO05D003030 9.9e-06 54.3 99 44.4
Dinv44300 Davidia involucrata HOM05D002853 ORTHO05D003030 9.9e-06 54.3 149 38.9


User provided reference genes

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