Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia21167 Actinidia chinensis HOM05D001789 ORTHO05D001755 2.2e-31 138.3 67 100.0
Dinv34576 Davidia involucrata HOM05D001789 ORTHO05D010416 6.0e-13 77.0 70 58.6
vmacro14863 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 6.7e-12 73.6 70 55.7
Rhsim01G0268700 Rhododendron simsii HOM05D001789 ORTHO05D001755 1.1e-11 72.8 70 55.7
Rhsim01G0268800 Rhododendron simsii HOM05D001789 ORTHO05D001755 4.3e-11 70.9 64 57.8
AUR62001052 Chenopodium quinoa HOM05D001789 ORTHO05D001755 6.2e-10 67.0 57 56.1
AUR62004900 Chenopodium quinoa HOM05D001789 ORTHO05D001755 6.2e-10 67.0 57 56.1
Manes.09G151500 Manihot esculenta HOM05D001789 ORTHO05D001755 1.4e-09 65.9 57 56.1
EL10Ac4g09088 Beta vulgaris HOM05D001789 ORTHO05D001755 1.8e-09 65.5 57 54.4
COL.COLO4_15370 Corchorus olitorius HOM05D001789 ORTHO05D001755 1.8e-09 65.5 57 54.4
Lj2A1158T42 Lonicera japonica HOM05D001789 ORTHO05D001755 1.8e-09 65.5 64 54.7
Sc15g0002530 Simmondsia chinensis HOM05D001789 ORTHO05D001755 1.8e-09 65.5 58 53.4
Thecc.05G281000 Theobroma cacao HOM05D001789 ORTHO05D001755 1.8e-09 65.5 57 54.4
MD04G1226000 Malus domestica HOM05D001789 ORTHO05D001755 2.4e-09 65.1 57 54.4
Prupe.6G344800 Prunus persica HOM05D001789 ORTHO05D001755 2.4e-09 65.1 57 54.4
Aqoxy2G03554 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 3.1e-09 64.7 58 56.9
CSS0016190 Camellia sinensis var. sinensis HOM05D001789 ORTHO05D001755 3.1e-09 64.7 57 56.1
TAR365G0302 Trochodendron aralioides HOM05D001789 ORTHO05D001755 3.1e-09 64.7 58 56.9
Haze_04374 Corylus avellana HOM05D001789 ORTHO05D001755 4.0e-09 64.3 57 54.4
Manes.08G136000 Manihot esculenta HOM05D001789 ORTHO05D001755 4.0e-09 64.3 57 54.4
SalBow8G1668 Salvia bowleyana HOM05D001789 ORTHO05D001755 4.0e-09 64.3 57 56.1
TAR636G0648 Trochodendron aralioides HOM05D001789 ORTHO05D001755 4.0e-09 64.3 57 57.9
Duzib128G1133 Durio zibethinus HOM05D001789 ORTHO05D001755 5.3e-09 63.9 57 52.6
Gohir.A13G169500 Gossypium hirsutum HOM05D001789 ORTHO05D001755 5.3e-09 63.9 57 52.6
RcHm_v2.0_Chr3g0450651 Rosa chinensis HOM05D001789 ORTHO05D001755 5.3e-09 63.9 57 52.6
unitig_37.g12638 Utricularia gibba HOM05D001789 ORTHO05D001755 5.3e-09 63.9 60 53.3
BcaB04g21349 Brassica carinata HOM05D001789 ORTHO05D001755 6.9e-09 63.5 57 54.4
Cfa006403 Carpinus fangiana HOM05D001789 ORTHO05D001755 6.9e-09 63.5 57 54.4
Gohir.D13G175000 Gossypium hirsutum HOM05D001789 ORTHO05D001755 6.9e-09 63.5 58 51.7
Nn1g02591 Nelumbo nucifera HOM05D001789 ORTHO05D001755 6.9e-09 63.5 70 48.6
Oeu016446.1 Olea europaea HOM05D001789 ORTHO05D000116 6.9e-09 63.5 57 56.1
Rhsim07G0074300 Rhododendron simsii HOM05D001789 ORTHO05D001755 6.9e-09 63.5 57 56.1
GSVIVG01036270001 Vitis vinifera HOM05D001789 ORTHO05D001755 6.9e-09 63.5 57 56.1
Ah.06g192110 Amaranthus hybridus HOM05D001789 ORTHO05D001755 9.0e-09 63.2 57 52.6
vmacro13812 Vaccinium macrocarpon HOM05D001789 ORTHO05D001755 1.2e-08 62.8 57 56.1
ATR0665G154 Amborella trichopoda HOM05D001789 ORTHO05D001755 1.5e-08 62.4 59 59.3
Eucgr.H04321 Eucalyptus grandis HOM05D001789 ORTHO05D001755 1.5e-08 62.4 57 54.4
FAN02G1989 Fragaria x ananassa HOM05D001789 ORTHO05D001755 1.5e-08 62.4 57 52.6
FAN09G2804 Fragaria x ananassa HOM05D001789 ORTHO05D001755 1.5e-08 62.4 57 52.6
PSO384G1410 Papaver somniferum HOM05D001789 ORTHO05D001755 1.5e-08 62.4 58 53.4
PGR004G2017 Punica granatum HOM05D001789 ORTHO05D001755 1.5e-08 62.4 57 54.4
BcaC09g47780 Brassica carinata HOM05D001789 ORTHO05D001755 2.0e-08 62.0 57 52.6
BNapus_Darmor_BZH_scaffold_78p00990 Brassica napus HOM05D001789 ORTHO05D001755 2.0e-08 62.0 57 52.6
BraA01t04507Z Brassica rapa HOM05D001789 ORTHO05D001755 2.0e-08 62.0 57 52.6
CANSAT54G0997 Cannabis sativa HOM05D001789 ORTHO05D001755 2.0e-08 62.0 54 55.6
Cc02_g30810 Coffea canephora HOM05D001789 ORTHO05D001755 2.0e-08 62.0 57 54.4
THA.LOC104821668 Tarenaya hassleriana HOM05D001789 ORTHO05D001755 2.0e-08 62.0 57 52.6
Atru.chr2.837 Acer truncatum HOM05D001789 ORTHO05D001755 2.6e-08 61.6 57 52.6
DCAR_006649 Daucus carota HOM05D001789 ORTHO05D001755 2.6e-08 61.6 60 46.7
Migut.B01098 Erythranthe guttata HOM05D001789 ORTHO05D001755 2.6e-08 61.6 57 54.4
Potri.013G042300 Populus trichocarpa HOM05D001789 ORTHO05D001755 2.6e-08 61.6 57 49.1
SalBow8G2035 Salvia bowleyana HOM05D001789 ORTHO05D001755 2.6e-08 61.6 57 54.4
MSTRG.20457 Avicennia marina HOM05D001789 ORTHO05D001755 3.4e-08 61.2 57 54.4
Ciclev10028402m.g Citrus clementina HOM05D001789 ORTHO05D001755 3.4e-08 61.2 58 50.0
HanXRQChr14g0446601 Helianthus annuus HOM05D001789 ORTHO05D001755 3.4e-08 61.2 57 50.9
Actinidia18365 Actinidia chinensis HOM05D001789 ORTHO05D001755 4.5e-08 60.8 57 52.6
CiPaw.07G068600 Carya illinoinensis HOM05D001789 ORTHO05D001755 4.5e-08 60.8 57 50.9
Dinv20290 Davidia involucrata HOM05D001789 ORTHO05D001755 4.5e-08 60.8 57 52.6
PSO339G5673 Papaver somniferum HOM05D001789 ORTHO05D001755 4.5e-08 60.8 57 52.6
Peaxi162Scf00282g00618 Petunia axillaris HOM05D001789 ORTHO05D001755 4.5e-08 60.8 43 65.1
AT3G04710 Arabidopsis thaliana HOM05D001789 ORTHO05D001755 5.8e-08 60.5 58 50.0
FvH4_6g02680 Fragaria vesca HOM05D001789 ORTHO05D001755 5.8e-08 60.5 57 50.9
Sabra05G0168200 Salix brachista HOM05D001789 ORTHO05D001755 5.8e-08 60.5 56 51.8
BcaB04g19305 Brassica carinata HOM05D001789 ORTHO05D001755 7.6e-08 60.1 57 52.6
BcaC01g04353 Brassica carinata HOM05D001789 ORTHO05D001755 7.6e-08 60.1 57 52.6
A03p33800 Brassica napus HOM05D001789 ORTHO05D001755 7.6e-08 60.1 57 52.6
Lsat_1_v5_gn_2_64421 Lactuca sativa HOM05D001789 ORTHO05D001755 7.6e-08 60.1 57 49.1
HPP92_009631 Vanilla planifolia HOM05D001789 ORTHO05D001755 7.6e-08 60.1 57 52.6
MELO3C004392.2 Cucumis melo HOM05D001789 ORTHO05D001755 1.0e-07 59.7 57 47.4
Lju50C34T11 Lonicera japonica HOM05D001789 ORTHO05D001755 1.0e-07 59.7 57 50.9
AL3G14790 Arabidopsis lyrata HOM05D001789 ORTHO05D001755 1.3e-07 59.3 57 50.9
ClCG02G016750 Citrullus lanatus HOM05D001789 ORTHO05D001755 1.3e-07 59.3 57 50.9
CsaV3_2G003990 Cucumis sativus L. HOM05D001789 ORTHO05D001755 1.3e-07 59.3 57 47.4
Potri.005G054800 Populus trichocarpa HOM05D001789 ORTHO05D001755 1.3e-07 59.3 57 47.4
Lj1g0007033 Lotus japonicus HOM05D001789 ORTHO05D001755 1.7e-07 58.9 57 50.9
Nn1g02587 Nelumbo nucifera HOM05D001789 ORTHO05D001755 1.7e-07 58.9 57 52.6
Psat0s1144g0120 Pisum sativum HOM05D001789 ORTHO05D001755 1.7e-07 58.9 57 52.6
SEGI_21200 Sequoiadendron giganteum HOM05D001789 ORTHO05D001755 1.7e-07 58.9 60 50.0
Aqoxy4G01666 Aquilegia oxysepala HOM05D001053 ORTHO05D001755 2.2e-07 58.5 58 50.0
arahy.Tifrunner.gnm1.ann1.JN9GN2 Arachis hypogaea HOM05D001789 ORTHO05D001755 2.2e-07 58.5 55 50.9
CARHR078940 Cardamine hirsuta HOM05D001789 ORTHO05D001755 2.2e-07 58.5 57 49.1
arahy.Tifrunner.gnm1.ann1.K1HEIP Arachis hypogaea HOM05D001789 ORTHO05D001755 2.9e-07 58.2 55 50.9
C03p41100 Brassica napus HOM05D001789 ORTHO05D001755 2.9e-07 58.2 57 52.6
Manes.05G085350 Manihot esculenta HOM05D001789 ORTHO05D001755 2.9e-07 58.2 72 44.4
Aa31LG5G15100 Aethionema arabicum HOM05D001789 ORTHO05D001755 3.8e-07 57.8 57 47.4
Manes.05G085300 Manihot esculenta HOM05D001789 ORTHO05D001755 3.8e-07 57.8 72 44.4
TWI56G1124 Tripterygium wilfordii HOM05D001789 ORTHO05D001755 3.8e-07 57.8 57 49.1
Carub.0003s0386 Capsella rubella HOM05D001789 ORTHO05D001755 4.9e-07 57.4 57 49.1
CAN.G134.77 Capsicum annuum HOM05D001789 ORTHO05D001755 4.9e-07 57.4 57 52.6
Medtr7g115280 Medicago truncatula HOM05D001789 ORTHO05D001755 4.9e-07 57.4 57 49.1
Sp3g03550 Schrenkiella parvula HOM05D001789 ORTHO05D001755 4.9e-07 57.4 57 49.1
Aqoxy4G01760 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 6.5e-07 57.0 43 55.8
Aqoxy3G03319 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 8.4e-07 56.6 58 48.3
CAN.G134.81 Capsicum annuum HOM05D001789 ORTHO05D001755 8.4e-07 56.6 57 52.6
CDE06G0784 Ceratophyllum demersum HOM05D001789 ORTHO05D001755 8.4e-07 56.6 57 43.9
TPR.G7003 Trifolium pratense HOM05D001789 ORTHO05D001755 8.4e-07 56.6 57 50.9
Haze_04373 Corylus avellana HOM05D001789 ORTHO05D001755 1.1e-06 56.2 57 49.1
Glyma.19G245700 Glycine max HOM05D001789 ORTHO05D001755 1.1e-06 56.2 57 47.4
Gorai.013G200300 Gossypium raimondii HOM05D001789 ORTHO05D001755 1.1e-06 56.2 45 48.9
VMungo0540G0629 Vigna mungo HOM05D001789 ORTHO05D001755 1.1e-06 56.2 57 47.4
Aqoxy3G02736 Aquilegia oxysepala HOM05D001789 ORTHO05D001755 1.9e-06 55.5 71 43.7
Glyma.03G247600 Glycine max HOM05D001789 ORTHO05D001755 1.9e-06 55.5 57 47.4
Phvul.006G102400 Phaseolus vulgaris HOM05D001789 ORTHO05D001755 1.9e-06 55.5 57 47.4
Sed0022842 Sechium edule HOM05D001789 ORTHO05D001755 1.9e-06 55.5 57 45.6
Aqoxy2G03733 Aquilegia oxysepala HOM05D004164 ORTHO05D004891 2.5e-06 55.1 72 48.6
Cpa.g.sc617.3 Carica papaya HOM05D001789 ORTHO05D001755 3.2e-06 54.7 45 46.7
Solyc01g097220.3 Solanum lycopersicum HOM05D001789 ORTHO05D001755 3.2e-06 54.7 58 48.3
Solyc01g097190.4 Solanum lycopersicum HOM05D001789 ORTHO05D001755 4.2e-06 54.3 57 50.9
Sopen01g040860 Solanum pennellii HOM05D001789 ORTHO05D001755 4.2e-06 54.3 57 50.9
Os05g0103600 Oryza sativa ssp. japonica HOM05D001789 ORTHO05D001755 5.5e-06 53.9 70 40.0
Hund02888 Selenicereus undatus HOM05D001789 ORTHO05D001755 5.5e-06 53.9 71 46.5
ECA238G2814 Erigeron canadensis HOM05D001789 ORTHO05D001755 7.1e-06 53.5 58 41.4
Sopen01g040890 Solanum pennellii HOM05D001789 ORTHO05D001755 7.1e-06 53.5 58 46.6


User provided reference genes

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