Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia21044 Actinidia chinensis HOM05D005743 ORTHO05D007031 8.7e-90 333.6 163 100.0
Actinidia24820 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.1e-57 226.9 127 88.2
Dinv19686 Davidia involucrata HOM05D005743 ORTHO05D007031 2.0e-46 189.5 129 73.6
CSS0024650 Camellia sinensis var. sinensis HOM05D005743 ORTHO05D007031 4.5e-46 188.3 127 75.6
Rhsim01G0285500 Rhododendron simsii HOM05D005743 ORTHO05D007031 4.2e-44 181.8 127 72.4
Lj2A1195G24 Lonicera japonica HOM05D005743 ORTHO05D007031 1.0e-42 177.2 122 71.3
Hma1.2p1_0491F.1_g164590 Hydrangea macrophylla HOM05D005743 ORTHO05D007031 2.3e-42 176.0 121 70.2
Nitab4.5_0002470g0070 Nicotiana tabacum HOM05D005743 ORTHO05D007031 6.8e-42 174.5 127 70.1
Nitab4.5_0005805g0040 Nicotiana tabacum HOM05D005743 ORTHO05D007031 6.8e-42 174.5 121 72.7
Sopen06g003890 Solanum pennellii HOM05D005743 ORTHO05D007031 2.6e-41 172.6 121 71.9
CAN.G1989.8 Capsicum annuum HOM05D005743 ORTHO05D007031 5.7e-41 171.4 121 71.9
TAR362G0334 Trochodendron aralioides HOM05D005743 ORTHO05D007031 9.7e-41 170.6 122 66.4
Cfa005908 Carpinus fangiana HOM05D005743 ORTHO05D007031 1.7e-40 169.9 126 67.5
Gohir.D11G119400 Gossypium hirsutum HOM05D005743 ORTHO05D007031 1.7e-40 169.9 123 68.3
Solyc06g009130.3 Solanum lycopersicum HOM05D005743 ORTHO05D007031 1.7e-40 169.9 121 71.1
Peaxi162Scf00399g00716 Petunia axillaris HOM05D005743 ORTHO05D007031 2.8e-40 169.1 121 69.4
Prupe.8G261900 Prunus persica HOM05D005743 ORTHO05D007031 3.7e-40 168.7 130 67.7
Haze_04942 Corylus avellana HOM05D005743 ORTHO05D007031 8.3e-40 167.5 126 66.7
Thecc.01G301000 Theobroma cacao HOM05D005743 ORTHO05D007031 1.4e-39 166.8 114 72.8
Ciclev10019600m.g Citrus clementina HOM05D005743 ORTHO05D007031 3.1e-39 165.6 125 67.2
COL.COLO4_23341 Corchorus olitorius HOM05D005743 ORTHO05D007031 3.1e-39 165.6 122 71.3
MELO3C017953.2 Cucumis melo HOM05D005743 ORTHO05D007031 5.3e-39 164.9 124 63.7
Gorai.007G127900 Gossypium raimondii HOM05D005743 ORTHO05D007031 7.0e-39 164.5 123 67.5
Nn4g25787 Nelumbo nucifera HOM05D005743 ORTHO05D007031 1.2e-38 163.7 125 63.2
Oeu046676.1 Olea europaea HOM05D005743 ORTHO05D007031 4.5e-38 161.8 121 67.8
QL12p028420 Quercus lobata HOM05D005743 ORTHO05D007031 4.5e-38 161.8 98 79.6
GSVIVG01028023001 Vitis vinifera HOM05D005743 ORTHO05D007031 4.5e-38 161.8 122 63.1
Cc01_g20880 Coffea canephora HOM05D005743 ORTHO05D007031 5.9e-38 161.4 122 67.2
MD03G1288600 Malus domestica HOM05D005743 ORTHO05D007031 7.7e-38 161.0 130 64.6
CsaV3_4G000840 Cucumis sativus L. HOM05D005743 ORTHO05D007031 1.0e-37 160.6 124 61.3
CANSAT25G1370 Cannabis sativa HOM05D005743 ORTHO05D007031 2.9e-37 159.1 122 63.9
TWI59G0198 Tripterygium wilfordii HOM05D005743 ORTHO05D007031 2.9e-37 159.1 122 64.8
RcHm_v2.0_Chr6g0294071 Rosa chinensis HOM05D005743 ORTHO05D007031 3.8e-37 158.7 123 65.9
Eucgr.K03487 Eucalyptus grandis HOM05D005743 ORTHO05D007031 6.5e-37 157.9 122 64.8
MBI18_g06031_MAGBIO Magnolia biondii HOM05D005743 ORTHO05D007031 6.5e-37 157.9 121 66.9
Eucgr.K03488 Eucalyptus grandis HOM05D005743 ORTHO05D007031 8.5e-37 157.5 128 62.5
Duzib138G1616 Durio zibethinus HOM05D005743 ORTHO05D007031 1.1e-36 157.1 122 64.8
Lj5g0015401 Lotus japonicus HOM05D005743 ORTHO05D007031 1.1e-36 157.1 123 65.0
Aqoxy2G02938 Aquilegia oxysepala HOM05D005743 ORTHO05D007031 1.5e-36 156.8 122 63.1
Cpa.g.sc9.258 Carica papaya HOM05D005743 ORTHO05D007031 1.9e-36 156.4 122 61.5
Potri.014G128600 Populus trichocarpa HOM05D005743 ORTHO05D007031 1.9e-36 156.4 123 66.7
FAN15G2676 Fragaria x ananassa HOM05D005743 ORTHO05D007031 2.5e-36 156.0 123 65.0
FAN20G0637 Fragaria x ananassa HOM05D005743 ORTHO05D007031 3.2e-36 155.6 123 65.0
ClCG10G010970 Citrullus lanatus HOM05D005743 ORTHO05D007031 4.2e-36 155.2 127 60.6
PSO407G0387 Papaver somniferum HOM05D005743 ORTHO05D007031 4.2e-36 155.2 121 65.3
PSO170G2277 Papaver somniferum HOM05D005743 ORTHO05D007031 7.2e-36 154.5 121 66.1
RcHm_v2.0_Chr6g0294081 Rosa chinensis HOM05D005743 ORTHO05D007031 7.2e-36 154.5 145 56.6
Ca_10331_v3 Cicer arietinum L. HOM05D005743 ORTHO05D007031 9.4e-36 154.1 125 62.4
FvH4_2g25770 Fragaria vesca HOM05D005743 ORTHO05D007031 9.4e-36 154.1 123 64.2
FAN24G1083 Fragaria x ananassa HOM05D005743 ORTHO05D007031 9.4e-36 154.1 123 64.2
Sabra14G0095500 Salix brachista HOM05D005743 ORTHO05D007031 1.2e-35 153.7 114 67.5
FAN27G1322 Fragaria x ananassa HOM05D005743 ORTHO05D007031 2.1e-35 152.9 123 64.2
PGR044G1461 Punica granatum HOM05D005743 ORTHO05D007031 2.1e-35 152.9 180 48.9
SalBow2G1764 Salvia bowleyana HOM05D005743 ORTHO05D007031 2.1e-35 152.9 128 61.7
Medtr1g088430 Medicago truncatula HOM05D005743 ORTHO05D007031 3.6e-35 152.1 121 63.6
Atru.chr5.1142 Acer truncatum HOM05D005743 ORTHO05D007031 4.7e-35 151.8 132 59.8
Psat6g165240 Pisum sativum HOM05D005743 ORTHO05D007031 4.7e-35 151.8 125 59.2
arahy.Tifrunner.gnm1.ann1.39WPG8 Arachis hypogaea HOM05D005743 ORTHO05D007031 6.1e-35 151.4 121 62.0
arahy.Tifrunner.gnm1.ann1.V1RZF6 Arachis hypogaea HOM05D005743 ORTHO05D007031 6.1e-35 151.4 121 62.0
Sed0000130 Sechium edule HOM05D005743 ORTHO05D007031 6.1e-35 151.4 124 62.1
Migut.D00150 Erythranthe guttata HOM05D005743 ORTHO05D007031 2.3e-34 149.4 122 62.3
VMungo0720G3165 Vigna mungo HOM05D005743 ORTHO05D007031 2.3e-34 149.4 103 68.9
SalBow3G4402 Salvia bowleyana HOM05D005743 ORTHO05D007031 1.5e-33 146.7 122 63.1
Migut.N01507 Erythranthe guttata HOM05D005743 ORTHO05D007031 2.0e-33 146.4 123 59.3
CAN.G1280.3 Capsicum annuum HOM05D005743 ORTHO05D007031 3.4e-33 145.6 123 65.0
TPR.G33974 Trifolium pratense HOM05D005743 ORTHO05D007031 3.4e-33 145.6 121 58.7
Phvul.007G147000 Phaseolus vulgaris HOM05D005743 ORTHO05D007031 4.4e-33 145.2 122 61.5
Migut.O00421 Erythranthe guttata HOM05D005743 ORTHO05D007031 5.7e-33 144.8 123 60.2
Lalb_Chr06g0166491 Lupinus albus HOM05D005743 ORTHO05D007031 1.3e-32 143.7 114 60.5
Manes.01G219600 Manihot esculenta HOM05D005743 ORTHO05D007031 2.2e-32 142.9 123 57.7
Sc05g0003820 Simmondsia chinensis HOM05D005743 ORTHO05D007031 8.3e-32 141.0 122 58.2
THA.LOC104817489 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 8.3e-32 141.0 102 63.7
AUR62025577 Chenopodium quinoa HOM05D005743 ORTHO05D007031 1.4e-31 140.2 126 54.8
SGA_v2.0_scaffold198G41143 Striga asiatica HOM05D005743 ORTHO05D007031 1.4e-31 140.2 127 53.5
THA.LOC104827666 Tarenaya hassleriana HOM05D005743 ORTHO05D007031 1.8e-31 139.8 111 60.4
AUR62008667 Chenopodium quinoa HOM05D005743 ORTHO05D007031 2.4e-31 139.4 126 54.8
HPP92_016082 Vanilla planifolia HOM05D005743 ORTHO05D007031 2.4e-31 139.4 121 56.2
Carub.0004s3033 Capsella rubella HOM05D005743 ORTHO05D007031 3.1e-31 139.0 115 55.7
AL4G47180 Arabidopsis lyrata HOM05D005743 ORTHO05D007031 4.1e-31 138.7 115 56.5
BcaB02g08759 Brassica carinata HOM05D005743 ORTHO05D007031 1.6e-30 136.7 124 54.8
Glyma.10G018000 Glycine max HOM05D005743 ORTHO05D007031 1.6e-30 136.7 122 57.4
Thhalv10001391m.g Eutrema salsugineum HOM05D005743 ORTHO05D007031 3.5e-30 135.6 95 66.3
AT2G47600 Arabidopsis thaliana HOM05D005743 ORTHO05D007031 4.5e-30 135.2 115 54.8
CARHR143000 Cardamine hirsuta HOM05D005743 ORTHO05D007031 4.5e-30 135.2 94 66.0
C04p00250 Brassica napus HOM05D005743 ORTHO05D007031 5.9e-30 134.8 94 63.8
BolC4t21668H Brassica oleracea HOM05D005743 ORTHO05D007031 5.9e-30 134.8 94 63.8
BraA05t19031Z Brassica rapa HOM05D005743 ORTHO05D007031 5.9e-30 134.8 94 63.8
CDE02G2026 Ceratophyllum demersum HOM05D005743 ORTHO05D007031 5.9e-30 134.8 121 54.5
Aa31LG1G28940 Aethionema arabicum HOM05D005743 ORTHO05D007031 7.7e-30 134.4 103 60.2
HanXRQChr13g0413001 Helianthus annuus HOM05D005743 ORTHO05D007031 1.0e-29 134.0 121 57.9
A05p00330 Brassica napus HOM05D005743 ORTHO05D007031 2.3e-29 132.9 94 62.8
ECA248G2514 Erigeron canadensis HOM05D005743 ORTHO05D007031 2.9e-29 132.5 124 59.7
Ah.08g213420 Amaranthus hybridus HOM05D005743 ORTHO05D007031 8.6e-29 131.0 122 53.3
Lsat_1_v5_gn_5_191280 Lactuca sativa HOM05D005743 ORTHO05D007031 1.1e-28 130.6 125 56.8
EL10Ac7g17510 Beta vulgaris HOM05D005743 ORTHO05D007031 4.2e-28 128.6 127 55.1
Os11g0660000 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 5.5e-28 128.3 121 56.2
Sc05g0003780 Simmondsia chinensis HOM05D005743 ORTHO05D007031 5.5e-28 128.3 111 60.4
vmacro15016 Vaccinium macrocarpon HOM05D005743 ORTHO05D007031 1.6e-27 126.7 122 57.4
DCAR_005790 Daucus carota HOM05D005743 ORTHO05D007031 1.4e-26 123.6 141 47.5
Os02g0644900 Oryza sativa ssp. japonica HOM05D005743 ORTHO05D007031 1.4e-26 123.6 98 60.2
Hund18172 Selenicereus undatus HOM05D005743 ORTHO05D007031 1.2e-25 120.6 93 63.4
Actinidia26720 Actinidia chinensis HOM05D005743 ORTHO05D007031 1.7e-24 116.7 55 100.0
SGA_v2.0_scaffold1G00362 Striga asiatica HOM05D005743 ORTHO05D007031 8.3e-24 114.4 103 55.3
Peaxi162Scf00001g04234 Petunia axillaris HOM05D005743 ORTHO05D007031 4.5e-22 108.6 72 76.4
SEGI_13510 Sequoiadendron giganteum HOM05D005743 ORTHO05D007031 4.7e-19 98.6 80 58.8
Pp3c1_39250 Physcomitrium patens HOM05D005743 ORTHO05D007031 1.2e-14 84.0 96 38.5
SMO351G0556 Selaginella moellendorffii HOM05D005743 ORTHO05D007031 2.1e-11 73.2 91 38.5
CiPaw.08G094900 Carya illinoinensis HOM05D005743 ORTHO05D007031 2.8e-11 72.8 71 50.7
Pp3c2_6060 Physcomitrium patens HOM05D005743 ORTHO05D007031 3.6e-11 72.4 113 32.7
Mapoly0134s0038 Marchantia polymorpha HOM05D005743 ORTHO05D007031 6.2e-11 71.6 99 34.3
AagrBONN_evm.TU.Sc2ySwM_344.5359 Anthoceros agrestis HOM05D005743 ORTHO05D007031 9.8e-09 64.3 95 31.6
AagrBONN_evm.TU.Sc2ySwM_368.1084 Anthoceros agrestis HOM05D005743 ORTHO05D007031 7.1e-07 58.2 86 37.2


User provided reference genes

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