Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 8.9e-50 199.9 97 100.0
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 3.0e-37 158.3 96 80.2
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.5e-36 156.0 98 77.6
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 4.3e-36 154.5 97 78.4
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 7.3e-36 153.7 97 79.4
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 8.1e-35 150.2 98 74.5
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 8.1e-35 150.2 98 74.5
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 8.1e-35 150.2 97 76.3
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.1e-34 149.8 98 74.5
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 1.4e-34 149.4 97 75.3
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 1.8e-34 149.1 98 74.5
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 3.1e-34 148.3 95 74.7
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.0e-34 147.9 95 74.7
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 4.0e-34 147.9 97 73.2
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 4.0e-34 147.9 95 75.8
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 5.3e-34 147.5 97 74.2
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.3e-34 147.5 98 73.5
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 6.9e-34 147.1 98 73.5
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 9.0e-34 146.7 95 73.7
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 9.0e-34 146.7 95 73.7
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 9.0e-34 146.7 102 70.6
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 1.2e-33 146.4 97 75.3
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.2e-33 146.4 95 73.7
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.2e-33 146.4 95 73.7
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 1.2e-33 146.4 100 76.0
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 1.2e-33 146.4 95 74.7
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 2.0e-33 145.6 96 77.1
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 2.0e-33 145.6 96 77.1
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 2.6e-33 145.2 100 74.0
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 2.6e-33 145.2 100 74.0
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 3.4e-33 144.8 96 70.8
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 3.4e-33 144.8 97 73.2
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 4.5e-33 144.4 98 71.4
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 4.5e-33 144.4 102 71.6
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 5.8e-33 144.1 101 68.3
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 5.8e-33 144.1 97 72.2
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 7.6e-33 143.7 96 69.8
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 9.9e-33 143.3 91 76.9
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 9.9e-33 143.3 98 68.4
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.3e-32 142.9 97 70.1
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 1.3e-32 142.9 97 70.1
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 1.3e-32 142.9 97 69.1
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.3e-32 142.9 91 75.8
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 2.2e-32 142.1 97 72.2
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.2e-32 142.1 92 73.9
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 2.9e-32 141.7 91 75.8
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 2.9e-32 141.7 96 76.0
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 4.9e-32 141.0 97 68.0
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 4.9e-32 141.0 97 68.0
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 4.9e-32 141.0 97 68.0
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 4.9e-32 141.0 98 70.4
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 6.4e-32 140.6 98 73.5
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 6.4e-32 140.6 96 67.7
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 6.4e-32 140.6 92 73.9
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 6.4e-32 140.6 92 73.9
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 6.4e-32 140.6 95 74.7
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 1.1e-31 139.8 97 68.0
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 1.1e-31 139.8 97 68.0
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 1.1e-31 139.8 97 68.0
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 1.1e-31 139.8 97 68.0
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.4e-31 139.4 100 72.0
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 3.2e-31 138.3 100 72.0
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 5.4e-31 137.5 93 69.9
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 7.1e-31 137.1 97 67.0
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 7.1e-31 137.1 100 69.0
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.2e-30 136.3 96 65.6
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 1.2e-30 136.3 97 67.0
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.1e-30 135.6 97 67.0
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 3.5e-30 134.8 91 69.2
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 4.6e-30 134.4 96 67.7
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 4.6e-30 134.4 96 67.7
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 6.0e-30 134.0 96 64.6
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 6.0e-30 134.0 97 64.9
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 6.0e-30 134.0 98 69.4
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 6.0e-30 134.0 98 69.4
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 7.9e-30 133.7 97 69.1
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.0e-29 133.3 97 63.9
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 1.0e-29 133.3 92 71.7
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 1.0e-29 133.3 101 68.3
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 1.3e-29 132.9 91 65.9
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.3e-29 132.9 98 67.3
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 2.3e-29 132.1 97 69.1
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.0e-29 131.7 85 77.6
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 3.0e-29 131.7 85 77.6
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.0e-29 131.7 96 74.0
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 3.9e-29 131.3 98 70.4
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 3.9e-29 131.3 87 71.3
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.9e-29 131.3 98 64.3
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 8.7e-29 130.2 98 66.3
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 1.5e-28 129.4 96 63.5
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 3.3e-28 128.3 99 62.6
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 3.3e-28 128.3 103 65.0
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 4.3e-28 127.9 96 71.9
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 5.6e-28 127.5 96 65.6
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 5.6e-28 127.5 103 65.0
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 9.6e-28 126.7 98 64.3
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 1.3e-27 126.3 93 66.7
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.3e-27 126.3 98 66.3
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.6e-27 125.9 81 75.3
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 2.4e-26 122.1 96 66.7
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 2.6e-25 118.6 95 64.2
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 3.4e-25 118.2 96 65.6
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 1.3e-24 116.3 93 61.3
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 1.3e-24 116.3 97 64.9
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.3e-24 116.3 95 58.9
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 4.9e-24 114.4 100 59.0
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 6.4e-24 114.0 98 60.2
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 6.4e-24 114.0 97 57.7
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 1.9e-23 112.5 102 57.8
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 2.4e-23 112.1 100 59.0
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 3.2e-23 111.7 98 54.1
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 9.3e-23 110.2 90 60.0
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 1.2e-22 109.8 79 68.4
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.6e-22 109.4 90 56.7
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 6.7e-21 104.0 68 76.5
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.7e-21 103.6 98 54.1
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 1.6e-19 99.4 95 55.8
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 1.6e-19 99.4 95 60.0
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 3.7e-19 98.2 94 58.5
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.4e-18 95.5 97 60.8
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.0e-17 92.4 78 60.3
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.3e-16 89.7 98 48.0
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 1.5e-12 76.3 100 42.0
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 3.3e-12 75.1 100 40.0
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 4.3e-12 74.7 100 41.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 2.6e-09 65.5 88 37.5
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 5.9e-09 64.3 101 40.6
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 8.5e-08 60.5 40 65.0
CDE05G3495 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 4.6e-06 54.7 56 53.6
Oeu016235.1 Olea europaea HOM05D006087 ORTHO05D007479 6.1e-06 54.3 50 58.0


User provided reference genes

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