Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia20070 Actinidia chinensis HOM05D000087 ORTHO05D054633 4.2e-80 302.0 245 100.0
Actinidia06609 Actinidia chinensis HOM05D000087 ORTHO05D000793 1.9e-16 90.5 159 62.9
Rhsim08G0001700 Rhododendron simsii HOM05D000087 ORTHO05D000793 8.4e-12 75.1 92 46.7
TAR376G0958 Trochodendron aralioides HOM05D000087 ORTHO05D000793 2.4e-11 73.6 50 74.0
Lj2A611T74 Lonicera japonica HOM05D000087 ORTHO05D000793 4.2e-11 72.8 53 69.8
vmacro12785 Vaccinium macrocarpon HOM05D000087 ORTHO05D000793 4.2e-11 72.8 53 66.0
Dinv19529 Davidia involucrata HOM05D000087 ORTHO05D000793 5.4e-11 72.4 53 71.7
Dinv34364 Davidia involucrata HOM05D000087 ORTHO05D000793 2.7e-10 70.1 53 67.9
CiPaw.04G080900 Carya illinoinensis HOM05D000087 ORTHO05D000793 3.5e-10 69.7 47 83.0
Manes.12G157500 Manihot esculenta HOM05D000087 ORTHO05D000793 3.5e-10 69.7 51 70.6
Rhsim10G0132300 Rhododendron simsii HOM05D000087 ORTHO05D000793 6.0e-10 68.9 46 71.7
CSS0028461 Camellia sinensis var. sinensis HOM05D000087 ORTHO05D000793 1.0e-09 68.2 41 82.9
QL10p042522 Quercus lobata HOM05D000087 ORTHO05D000793 1.3e-09 67.8 48 72.9
Potri.005G065200 Populus trichocarpa HOM05D000087 ORTHO05D000793 1.7e-09 67.4 48 70.8
GSVIVG01026451001 Vitis vinifera HOM05D000087 ORTHO05D000793 1.7e-09 67.4 48 70.8
CiPaw.03G119700 Carya illinoinensis HOM05D000087 ORTHO05D000793 2.3e-09 67.0 47 76.6
RcHm_v2.0_Chr2g0121981 Rosa chinensis HOM05D000087 ORTHO05D000793 2.3e-09 67.0 52 71.2
Sabra05G0054000 Salix brachista HOM05D000087 ORTHO05D000793 2.3e-09 67.0 48 68.8
Oeu058298.1 Olea europaea HOM05D000087 ORTHO05D000793 3.9e-09 66.2 53 69.8
Potri.007G104000 Populus trichocarpa HOM05D000087 ORTHO05D000793 1.1e-08 64.7 51 64.7
vmacro18676 Vaccinium macrocarpon HOM05D000087 ORTHO05D000793 1.1e-08 64.7 88 43.2
ClCG01G015170 Citrullus lanatus HOM05D000087 ORTHO05D000793 1.5e-08 64.3 50 72.0
MELO3C024603.2 Cucumis melo HOM05D000087 ORTHO05D000793 1.5e-08 64.3 50 72.0
CsaV3_6G041280 Cucumis sativus L. HOM05D000087 ORTHO05D000793 1.5e-08 64.3 50 72.0
CsaV3_7G013950 Cucumis sativus L. HOM05D000087 ORTHO05D000793 1.5e-08 64.3 50 72.0
Lj4C834T7 Lonicera japonica HOM05D000087 ORTHO05D000793 1.9e-08 63.9 47 66.0
TAR628G1294 Trochodendron aralioides HOM05D000087 ORTHO05D000793 1.9e-08 63.9 47 68.1
MSTRG.23468 Avicennia marina HOM05D000087 ORTHO05D000793 2.5e-08 63.5 53 66.0
MSTRG.2641 Avicennia marina HOM05D000087 ORTHO05D000793 2.5e-08 63.5 57 66.7
CANSAT01G0570 Cannabis sativa HOM05D000087 ORTHO05D000793 3.3e-08 63.2 61 63.9
Sed0011291 Sechium edule HOM05D000087 ORTHO05D000793 5.6e-08 62.4 50 70.0
Haze_25278 Corylus avellana HOM05D000087 ORTHO05D000793 7.3e-08 62.0 47 72.3
Eucgr.I00186 Eucalyptus grandis HOM05D000087 ORTHO05D000793 7.3e-08 62.0 47 72.3
PGSC0003DMG400023317 Solanum tuberosum HOM05D000087 ORTHO05D000793 7.3e-08 62.0 49 65.3
Hma1.2p1_0197F.1_g085080 Hydrangea macrophylla HOM05D000087 ORTHO05D000793 9.6e-08 61.6 59 55.9
Nitab4.5_0004278g0020 Nicotiana tabacum HOM05D000087 ORTHO05D000793 9.6e-08 61.6 49 69.4
TWI75G0233 Tripterygium wilfordii HOM05D000087 ORTHO05D000793 9.6e-08 61.6 49 69.4
Migut.H00684 Erythranthe guttata HOM05D000087 ORTHO05D000793 1.3e-07 61.2 53 64.2
Aqoxy5G02300 Aquilegia oxysepala HOM05D000087 ORTHO05D000793 1.6e-07 60.8 48 64.6
Cfa002916 Carpinus fangiana HOM05D000087 ORTHO05D000793 1.6e-07 60.8 47 70.2
Ciclev10000328m.g Citrus clementina HOM05D000087 ORTHO05D000793 1.6e-07 60.8 55 63.6
DCAR_010249 Daucus carota HOM05D000087 ORTHO05D000793 2.1e-07 60.5 53 58.5
Lj4g0018710 Lotus japonicus HOM05D000087 ORTHO05D000793 2.1e-07 60.5 52 65.4
Peaxi162Scf00525g00073 Petunia axillaris HOM05D000087 ORTHO05D000793 2.1e-07 60.5 48 68.8
Prupe.4G273900 Prunus persica HOM05D000087 ORTHO05D000793 2.1e-07 60.5 57 61.4
Sc16g0009470 Simmondsia chinensis HOM05D000087 ORTHO05D000793 2.1e-07 60.5 50 54.0
FvH4_1g24543 Fragaria vesca HOM05D000087 ORTHO05D000793 2.8e-07 60.1 50 70.0
FAN23G0948 Fragaria x ananassa HOM05D000087 ORTHO05D000793 2.8e-07 60.1 50 70.0
MD15G1134500 Malus domestica HOM05D000087 ORTHO05D000793 2.8e-07 60.1 46 63.0
TWI79G1023 Tripterygium wilfordii HOM05D000087 ORTHO05D000793 2.8e-07 60.1 49 69.4
Atru.chr4.860 Acer truncatum HOM05D000087 ORTHO05D000793 3.6e-07 59.7 47 63.8
Solyc05g056580.3 Solanum lycopersicum HOM05D000087 ORTHO05D000793 3.6e-07 59.7 49 63.3
Sopen05g034980 Solanum pennellii HOM05D000087 ORTHO05D000793 3.6e-07 59.7 49 63.3
Nitab4.5_0000905g0090 Nicotiana tabacum HOM05D000087 ORTHO05D000793 4.8e-07 59.3 49 67.3
PSO170G3607 Papaver somniferum HOM05D000087 ORTHO05D000793 8.1e-07 58.5 45 68.9
SGA_v2.0_scaffold20G09017 Striga asiatica HOM05D000087 ORTHO05D000793 8.1e-07 58.5 56 60.7
Psat7g044920 Pisum sativum HOM05D000087 ORTHO05D000793 1.1e-06 58.2 41 70.7
FAN28G2599 Fragaria x ananassa HOM05D000087 ORTHO05D000793 1.4e-06 57.8 50 68.0
Oeu037832.1 Olea europaea HOM05D000087 ORTHO05D000793 1.4e-06 57.8 48 68.8
Phvul.002G273700 Phaseolus vulgaris HOM05D000087 ORTHO05D000793 1.4e-06 57.8 52 63.5
PGR119G2487 Punica granatum HOM05D000087 ORTHO05D000793 1.4e-06 57.8 54 64.8
Sabra07G0085200 Salix brachista HOM05D000087 ORTHO05D000793 1.4e-06 57.8 52 59.6
TWI31G0619 Tripterygium wilfordii HOM05D000087 ORTHO05D000793 1.4e-06 57.8 49 67.3
FAN26G0376 Fragaria x ananassa HOM05D000087 ORTHO05D000793 2.4e-06 57.0 50 68.0
Glyma.08G001200 Glycine max HOM05D000087 ORTHO05D000793 2.4e-06 57.0 55 63.6
Oeu050109.1 Olea europaea HOM05D000087 ORTHO05D000793 2.4e-06 57.0 53 60.4
CAN.G1464.6 Capsicum annuum HOM05D000087 ORTHO05D000793 3.1e-06 56.6 49 63.3
Duzib264G0109 Durio zibethinus HOM05D000087 ORTHO05D000793 3.1e-06 56.6 44 63.6
PSO528G0043 Papaver somniferum HOM05D000087 ORTHO05D000793 3.1e-06 56.6 45 66.7
Thecc.01G135500 Theobroma cacao HOM05D000087 ORTHO05D000793 3.1e-06 56.6 44 61.4
Actinidia15190 Actinidia chinensis HOM05D000087 ORTHO05D000793 4.0e-06 56.2 50 54.0
arahy.Tifrunner.gnm1.ann1.V0PUYE Arachis hypogaea HOM05D000087 ORTHO05D000793 4.0e-06 56.2 60 55.0
VMungo0251G1846 Vigna mungo HOM05D000087 ORTHO05D000793 4.0e-06 56.2 38 76.3
Ca_17627_v3 Cicer arietinum L. HOM05D000087 ORTHO05D000793 5.3e-06 55.8 41 73.2
Glyma.05G193200 Glycine max HOM05D000087 ORTHO05D000793 5.3e-06 55.8 49 59.2
Nn5g28484 Nelumbo nucifera HOM05D000087 ORTHO05D000793 5.3e-06 55.8 46 63.0
TAR381G0973 Trochodendron aralioides HOM05D000087 ORTHO05D000793 5.3e-06 55.8 47 59.6
MSTRG.3601 Avicennia marina HOM05D000087 ORTHO05D000793 6.9e-06 55.5 46 67.4
Glyma.06G154800 Glycine max HOM05D000087 ORTHO05D000793 9.0e-06 55.1 41 70.7


User provided reference genes

Program Settings