Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia17764 Actinidia chinensis HOM05D007043 ORTHO05D008951 2.1e-65 252.3 134 100.0
Actinidia15616 Actinidia chinensis HOM05D007043 ORTHO05D008951 1.0e-48 196.8 132 81.8
CSS0028309 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 5.4e-45 184.5 132 75.0
CSS0014664 Camellia sinensis var. sinensis HOM05D007043 ORTHO05D008951 1.6e-44 183.0 132 74.2
Hma1.2p1_0678F.1_g202140 Hydrangea macrophylla HOM05D007043 ORTHO05D008951 3.6e-41 171.8 132 68.2
Lj7C386G15 Lonicera japonica HOM05D007043 ORTHO05D004353 1.8e-40 169.5 132 67.4
PSO170G2334 Papaver somniferum HOM05D007043 ORTHO05D008951 2.3e-40 169.1 133 63.9
TAR625G0503 Trochodendron aralioides HOM05D007043 ORTHO05D008951 5.2e-40 167.9 133 68.4
PSO210G5925 Papaver somniferum HOM05D007043 ORTHO05D008951 3.4e-39 165.2 133 62.4
vmacro21135 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.4e-39 164.9 133 69.2
vmacro22650 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 4.4e-39 164.9 133 69.2
vmacro21134 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 1.7e-38 162.9 133 69.2
Solyc04g072039.1 Solanum lycopersicum HOM05D007043 ORTHO05D008951 2.9e-38 162.2 139 62.6
Peaxi162Scf00360g00918 Petunia axillaris HOM05D007043 ORTHO05D008951 4.9e-38 161.4 130 65.4
Nitab4.5_0003178g0080 Nicotiana tabacum HOM05D007043 ORTHO05D008951 3.2e-37 158.7 130 65.4
Potri.005G198400 Populus trichocarpa HOM05D007043 ORTHO05D008951 3.2e-37 158.7 132 64.4
Sopen04g028120 Solanum pennellii HOM05D007043 ORTHO05D008951 3.2e-37 158.7 139 61.2
Nitab4.5_0003443g0050 Nicotiana tabacum HOM05D007043 ORTHO05D008951 4.1e-37 158.3 130 65.4
Phvul.007G084700 Phaseolus vulgaris HOM05D007043 ORTHO05D008951 9.2e-37 157.1 132 63.6
HPP92_024076 Vanilla planifolia HOM05D007043 ORTHO05D008951 2.0e-36 156.0 132 63.6
Atru.chr13.1985 Acer truncatum HOM05D007043 ORTHO05D008951 2.7e-36 155.6 132 62.1
CAN.G1183.21 Capsicum annuum HOM05D007043 ORTHO05D008951 3.5e-36 155.2 142 58.5
PGSC0003DMG400025055 Solanum tuberosum HOM05D007043 ORTHO05D008951 4.6e-36 154.8 141 59.6
MD10G1037900 Malus domestica HOM05D007043 ORTHO05D008951 1.0e-35 153.7 132 59.8
Eucgr.F02676 Eucalyptus grandis HOM05D007043 ORTHO05D008951 1.3e-35 153.3 131 58.8
unitig_52.g17176 Utricularia gibba HOM05D007043 ORTHO05D008951 1.3e-35 153.3 132 60.6
VMungo0720G3009 Vigna mungo HOM05D007043 ORTHO05D008951 1.3e-35 153.3 126 64.3
Nn5g28865 Nelumbo nucifera HOM05D007043 ORTHO05D008951 2.3e-35 152.5 133 63.2
GSVIVG01013701001 Vitis vinifera HOM05D007043 ORTHO05D008951 2.3e-35 152.5 130 61.5
Migut.N02945 Erythranthe guttata HOM05D007043 ORTHO05D008951 3.9e-35 151.8 132 60.6
SalBow6G0078 Salvia bowleyana HOM05D007043 ORTHO05D008951 3.9e-35 151.8 132 60.6
Aqoxy5G02008 Aquilegia oxysepala HOM05D007043 ORTHO05D008951 5.0e-35 151.4 132 62.1
arahy.Tifrunner.gnm1.ann1.T4LNKK Arachis hypogaea HOM05D007043 ORTHO05D008951 6.6e-35 151.0 132 61.4
Duzib093G0431 Durio zibethinus HOM05D007043 ORTHO05D008951 6.6e-35 151.0 132 59.8
ClCG08G007230 Citrullus lanatus HOM05D007043 ORTHO05D008951 1.1e-34 150.2 132 59.8
CsaV3_6G004900 Cucumis sativus L. HOM05D007043 ORTHO05D008951 1.9e-34 149.4 132 60.6
Glyma.10G220400 Glycine max HOM05D007043 ORTHO05D008951 1.9e-34 149.4 126 62.7
Sed0011039 Sechium edule HOM05D007043 ORTHO05D008951 2.5e-34 149.1 132 60.6
ECA232G2240 Erigeron canadensis HOM05D007043 ORTHO05D008951 3.3e-34 148.7 130 56.9
MD05G1035600 Malus domestica HOM05D007043 ORTHO05D008951 4.3e-34 148.3 132 58.3
Cpa.g.sc26.119 Carica papaya HOM05D007043 ORTHO05D008951 5.6e-34 147.9 132 60.6
Glyma.20G171100 Glycine max HOM05D007043 ORTHO05D008951 5.6e-34 147.9 126 62.7
Cc10_g06450 Coffea canephora HOM05D007043 ORTHO05D008951 9.5e-34 147.1 135 57.0
MELO3C019966.2 Cucumis melo HOM05D007043 ORTHO05D008951 9.5e-34 147.1 132 59.8
Manes.18G095900 Manihot esculenta HOM05D007043 ORTHO05D008951 9.5e-34 147.1 132 62.9
CiPaw.15G011600 Carya illinoinensis HOM05D007043 ORTHO05D008951 1.6e-33 146.4 131 58.0
TWI60G1299 Tripterygium wilfordii HOM05D007043 ORTHO05D008951 1.6e-33 146.4 130 58.5
DCAR_016685 Daucus carota HOM05D007043 ORTHO05D008951 2.1e-33 146.0 130 56.9
Prupe.8G043500 Prunus persica HOM05D007043 ORTHO05D008951 2.1e-33 146.0 133 59.4
vmacro22651 Vaccinium macrocarpon HOM05D007043 ORTHO05D008951 2.1e-33 146.0 143 62.2
arahy.Tifrunner.gnm1.ann1.7K1R9Z Arachis hypogaea HOM05D007043 ORTHO05D008951 2.8e-33 145.6 132 60.6
Ciclev10002599m.g Citrus clementina HOM05D007043 ORTHO05D008951 3.6e-33 145.2 132 59.8
Lj5g0012506 Lotus japonicus HOM05D007043 ORTHO05D008951 3.6e-33 145.2 126 63.5
Sc26g0002900 Simmondsia chinensis HOM05D007043 ORTHO05D008951 3.6e-33 145.2 132 59.1
AL2G31320 Arabidopsis lyrata HOM05D007043 ORTHO05D008951 4.7e-33 144.8 132 60.6
Carub.0002s1851 Capsella rubella HOM05D007043 ORTHO05D008951 4.7e-33 144.8 132 58.3
PGR042G2421 Punica granatum HOM05D007043 ORTHO05D008951 4.7e-33 144.8 130 56.2
Gohir.A06G112300 Gossypium hirsutum HOM05D007043 ORTHO05D008951 6.2e-33 144.4 132 56.1
QL02p037061 Quercus lobata HOM05D007043 ORTHO05D008951 8.0e-33 144.1 136 58.1
CDE05G0687 Ceratophyllum demersum HOM05D007043 ORTHO05D008951 1.0e-32 143.7 132 56.8
QL02p036540 Quercus lobata HOM05D007043 ORTHO05D008951 1.0e-32 143.7 137 57.7
Thecc.08G163200 Theobroma cacao HOM05D007043 ORTHO05D008951 1.0e-32 143.7 132 56.1
ATR1120G076 Amborella trichopoda HOM05D007043 ORTHO05D008951 1.4e-32 143.3 132 58.3
RcHm_v2.0_Chr6g0273931 Rosa chinensis HOM05D007043 ORTHO05D008951 1.4e-32 143.3 126 59.5
AT1G71750 Arabidopsis thaliana HOM05D007043 ORTHO05D008951 2.3e-32 142.5 132 57.6
Lalb_Chr02g0141621 Lupinus albus HOM05D007043 ORTHO05D008951 3.1e-32 142.1 126 61.9
Cfa018265 Carpinus fangiana HOM05D007043 ORTHO05D008951 4.0e-32 141.7 135 57.0
MBI04_g42205_MAGBIO Magnolia biondii HOM05D007043 ORTHO05D008951 4.0e-32 141.7 151 53.6
Lsat_1_v5_gn_9_42421 Lactuca sativa HOM05D007043 ORTHO05D008951 5.2e-32 141.4 149 53.7
Hund26674 Selenicereus undatus HOM05D007043 ORTHO05D008951 6.8e-32 141.0 130 55.4
Aa31LG4G8890 Aethionema arabicum HOM05D007043 ORTHO05D008951 1.2e-31 140.2 132 57.6
CARHR291040 Cardamine hirsuta HOM05D007043 ORTHO05D008951 1.2e-31 140.2 132 57.6
FAN15G1248 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.2e-31 140.2 126 57.1
FAN20G1550 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.2e-31 140.2 126 57.1
FvH4_2g12860 Fragaria vesca HOM05D007043 ORTHO05D008951 1.5e-31 139.8 126 57.1
FAN24G2827 Fragaria x ananassa HOM05D007043 ORTHO05D008951 1.5e-31 139.8 126 57.1
HanXRQChr11g0320161 Helianthus annuus HOM05D007043 ORTHO05D008951 1.5e-31 139.8 131 53.4
SHI09106 Sapria himalayana HOM05D007043 ORTHO05D008951 1.5e-31 139.8 132 56.1
Thhalv10019190m.g Eutrema salsugineum HOM05D007043 ORTHO05D008951 2.0e-31 139.4 132 59.1
Medtr1g097460 Medicago truncatula HOM05D007043 ORTHO05D008951 2.0e-31 139.4 132 56.8
AUR62034911 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.6e-31 139.0 130 55.4
Gohir.D06G116500 Gossypium hirsutum HOM05D007043 ORTHO05D008951 4.4e-31 138.3 132 53.8
Gorai.010G134300 Gossypium raimondii HOM05D007043 ORTHO05D008951 4.4e-31 138.3 132 53.8
A07p37900 Brassica napus HOM05D007043 ORTHO05D008951 5.8e-31 137.9 132 56.8
BraA07t31355Z Brassica rapa HOM05D007043 ORTHO05D008951 5.8e-31 137.9 132 56.1
Haze_17823 Corylus avellana HOM05D007043 ORTHO05D008951 5.8e-31 137.9 128 56.2
BcaC08g46601 Brassica carinata HOM05D007043 ORTHO05D008951 7.5e-31 137.5 132 56.8
C06p45800 Brassica napus HOM05D007043 ORTHO05D008951 7.5e-31 137.5 132 56.8
BolC6t39632H Brassica oleracea HOM05D007043 ORTHO05D008951 7.5e-31 137.5 132 56.8
Psat6g189600 Pisum sativum HOM05D007043 ORTHO05D008951 9.8e-31 137.1 127 58.3
THA.LOC104800095 Tarenaya hassleriana HOM05D007043 ORTHO05D008951 9.8e-31 137.1 126 55.6
TAR625G0569 Trochodendron aralioides HOM05D007043 ORTHO05D008951 1.3e-30 136.7 133 59.4
Ah.05g168310 Amaranthus hybridus HOM05D007043 ORTHO05D008951 1.7e-30 136.3 131 57.3
SGA_v2.0_scaffold364G49970 Striga asiatica HOM05D007043 ORTHO05D008951 2.2e-30 136.0 132 56.8
EL10Ac8g19385 Beta vulgaris HOM05D007043 ORTHO05D008951 8.3e-30 134.0 132 56.1
CANSAT25G3234 Cannabis sativa HOM05D007043 ORTHO05D008951 1.1e-29 133.7 130 56.2
Ca_10649_v3 Cicer arietinum L. HOM05D007043 ORTHO05D008951 1.1e-29 133.7 131 57.3
Zm00001eb282940 Zea mays HOM05D007043 ORTHO05D008951 2.4e-29 132.5 126 52.4
AUR62026618 Chenopodium quinoa HOM05D007043 ORTHO05D008951 2.7e-28 129.0 130 53.1
Os05g0182201 Oryza sativa ssp. japonica HOM05D007043 ORTHO05D008951 4.6e-28 128.3 129 51.9
Dinv41024 Davidia involucrata HOM05D007043 ORTHO05D008951 9.8e-23 110.5 75 74.7
AagrBONN_evm.TU.Sc2ySwM_228.3072 Anthoceros agrestis HOM05D007043 ORTHO05D008951 1.4e-21 106.7 128 44.5
SMO011G0020 Selaginella moellendorffii HOM05D007043 ORTHO05D008951 2.4e-21 105.9 131 44.3
Mapoly0053s0101 Marchantia polymorpha HOM05D007043 ORTHO05D008951 3.2e-21 105.5 126 48.4
CBR_g38956 Chara braunii HOM05D007043 ORTHO05D008951 1.6e-20 103.2 111 54.1
Cre08.g358900 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 3.4e-15 85.5 134 41.8
Pp3c20_5410 Physcomitrium patens HOM05D007043 ORTHO05D008951 1.3e-14 83.6 80 50.0
Cre17.g708100 Chlamydomonas reinhardtii HOM05D007043 ORTHO05D008951 2.2e-14 82.8 114 41.2
PRCOL_00003632 Prasinoderma coloniale HOM05D007043 ORTHO05D008951 1.6e-12 76.6 131 35.9
MCO13G296 Micromonas commoda HOM05D007043 ORTHO05D008951 1.3e-11 73.6 115 40.9
TPR.G17053 Trifolium pratense HOM05D007043 ORTHO05D008951 1.7e-11 73.2 132 36.4
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 9.9e-07 57.4 53 58.5


User provided reference genes

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