Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia16099 Actinidia chinensis HOM05D005913 ORTHO05D007138 1.0e-148 530.0 263 100.0
CSS0006724 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 1.3e-87 327.0 215 78.1
Dinv28648 Davidia involucrata HOM05D005913 ORTHO05D007138 1.0e-79 300.8 211 73.0
Rhsim01G0236700 Rhododendron simsii HOM05D005913 ORTHO05D007138 3.8e-79 298.9 211 72.0
CSS0022052 Camellia sinensis var. sinensis HOM05D005913 ORTHO05D007138 5.2e-76 288.5 179 80.4
Oeu008301.1 Olea europaea HOM05D005913 ORTHO05D007138 3.7e-74 282.3 211 66.8
Sopen10g034140 Solanum pennellii HOM05D005913 ORTHO05D007138 8.3e-74 281.2 211 68.2
Peaxi162Scf00228g00514 Petunia axillaris HOM05D000044 ORTHO05D007138 1.4e-73 280.4 211 67.8
Hma1.2p1_1287F.1_g273300 Hydrangea macrophylla HOM05D005913 ORTHO05D007138 2.4e-73 279.6 216 68.1
Solyc10g084700.2 Solanum lycopersicum HOM05D005913 ORTHO05D007138 7.0e-73 278.1 211 67.8
PGSC0003DMG400016288 Solanum tuberosum HOM05D005913 ORTHO05D007138 1.2e-72 277.3 211 66.8
TAR633G1775 Trochodendron aralioides HOM05D005913 ORTHO05D007138 1.6e-72 276.9 213 67.6
PGSC0003DMG402011001 Solanum tuberosum HOM05D005913 ORTHO05D007138 4.5e-72 275.4 211 66.4
Dinv25093 Davidia involucrata HOM05D005913 ORTHO05D007138 1.0e-71 274.2 211 70.1
CAN.G324.3 Capsicum annuum HOM05D005913 ORTHO05D007138 1.2e-69 267.3 212 63.2
ECA247G1367 Erigeron canadensis HOM05D005913 ORTHO05D007138 1.6e-69 266.9 211 63.5
Nitab4.5_0000037g0040 Nicotiana tabacum HOM05D005913 ORTHO05D007138 4.7e-69 265.4 180 72.2
GSVIVG01024730001 Vitis vinifera HOM05D005913 ORTHO05D007138 7.5e-67 258.1 213 62.9
QL05p072708 Quercus lobata HOM05D005913 ORTHO05D007138 8.3e-66 254.6 212 64.2
Lsat_1_v5_gn_9_20000 Lactuca sativa HOM05D005913 ORTHO05D007138 1.1e-65 254.2 212 64.2
TWI31G0765 Tripterygium wilfordii HOM05D005913 ORTHO05D007138 1.4e-65 253.8 206 64.6
TAR369G0609 Trochodendron aralioides HOM05D005913 ORTHO05D007138 4.1e-65 252.3 213 62.4
MSTRG.24154 Avicennia marina HOM05D005913 ORTHO05D007138 5.4e-65 251.9 211 61.6
Nn2g15825 Nelumbo nucifera HOM05D005913 ORTHO05D007138 7.0e-65 251.5 236 60.2
QL01p038500 Quercus lobata HOM05D005913 ORTHO05D007138 1.2e-64 250.8 212 63.7
vmacro14595 Vaccinium macrocarpon HOM05D005913 ORTHO05D007138 3.5e-64 249.2 184 71.2
CiPaw.13G076700 Carya illinoinensis HOM05D005913 ORTHO05D007138 7.8e-64 248.1 214 63.1
SGA_v2.0_scaffold25G11107 Striga asiatica HOM05D005913 ORTHO05D007138 1.0e-60 237.7 211 59.7
Sed0020527 Sechium edule HOM05D005913 ORTHO05D007138 5.2e-60 235.3 213 59.6
Cfa011705 Carpinus fangiana HOM05D005913 ORTHO05D007138 1.2e-59 234.2 218 58.3
Peaxi162Scf00384g00045 Petunia axillaris HOM05D005913 ORTHO05D007138 2.6e-59 233.0 184 63.6
Lj3A585T46 Lonicera japonica HOM05D005913 ORTHO05D007138 5.7e-59 231.9 175 68.0
HanXRQChr16g0518331 Helianthus annuus HOM05D005913 ORTHO05D007138 7.5e-59 231.5 211 58.8
Lalb_Chr19g0128221 Lupinus albus HOM05D005913 ORTHO05D007138 8.3e-58 228.0 214 57.5
Sc21g0006400 Simmondsia chinensis HOM05D005913 ORTHO05D007138 8.3e-58 228.0 217 59.4
CsaV3_6G016190 Cucumis sativus L. HOM05D005913 ORTHO05D007138 1.4e-57 227.3 215 56.7
MD11G1073200 Malus domestica HOM05D005913 ORTHO05D007138 2.4e-57 226.5 217 60.4
RcHm_v2.0_Chr5g0069871 Rosa chinensis HOM05D005913 ORTHO05D007138 5.4e-57 225.3 214 56.5
Sc21g0006380 Simmondsia chinensis HOM05D005913 ORTHO05D007138 5.4e-57 225.3 217 59.4
Migut.N03298 Erythranthe guttata HOM05D005913 ORTHO05D007138 7.0e-57 224.9 211 56.9
FvH4_3g38720 Fragaria vesca HOM05D005913 ORTHO05D007138 9.2e-57 224.6 213 57.3
FAN11G0587 Fragaria x ananassa HOM05D005913 ORTHO05D007138 1.6e-56 223.8 213 57.3
MELO3C025845.2 Cucumis melo HOM05D005913 ORTHO05D007138 3.5e-56 222.6 235 53.2
Gohir.D13G228900 Gossypium hirsutum HOM05D005913 ORTHO05D007138 8.6e-55 218.0 213 58.2
Gorai.013G259900 Gossypium raimondii HOM05D005913 ORTHO05D007138 1.1e-54 217.6 213 58.2
Prupe.6G056500 Prunus persica HOM05D005913 ORTHO05D007138 4.3e-54 215.7 217 57.6
FAN21G0630 Fragaria x ananassa HOM05D005913 ORTHO05D007138 5.6e-54 215.3 213 55.4
Eucgr.J01039 Eucalyptus grandis HOM05D005913 ORTHO05D007138 1.2e-53 214.2 213 55.9
Thecc.09G300200 Theobroma cacao HOM05D005913 ORTHO05D007138 1.6e-53 213.8 211 55.5
FAN25G2063 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.8e-53 213.0 213 54.5
Duzib150G0854 Durio zibethinus HOM05D005913 ORTHO05D007138 6.2e-53 211.8 214 56.5
Haze_24336 Corylus avellana HOM05D005913 ORTHO05D007138 1.1e-52 211.1 293 43.0
PSO675G7356 Papaver somniferum HOM05D005913 ORTHO05D007138 2.3e-52 209.9 213 53.5
CANSAT56G2716 Cannabis sativa HOM05D005913 ORTHO05D007138 4.0e-52 209.1 189 60.8
PSO801G0017 Papaver somniferum HOM05D005913 ORTHO05D007138 8.9e-52 208.0 213 54.9
Aqoxy4G02545 Aquilegia oxysepala HOM05D005913 ORTHO05D007138 4.4e-51 205.7 214 52.3
AUR62020144 Chenopodium quinoa HOM05D005913 ORTHO05D007138 4.4e-51 205.7 215 54.9
PSO339G4526 Papaver somniferum HOM05D005913 ORTHO05D007138 4.4e-51 205.7 213 53.5
DCAR_002129 Daucus carota HOM05D005913 ORTHO05D007138 1.3e-50 204.1 224 54.9
Gohir.A13G224200 Gossypium hirsutum HOM05D005913 ORTHO05D007138 2.2e-50 203.4 212 55.7
FAN16G2194 Fragaria x ananassa HOM05D005913 ORTHO05D007138 2.4e-49 199.9 214 53.7
CDE04G2145 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 5.4e-49 198.7 213 55.9
arahy.Tifrunner.gnm1.ann1.6RYY2X Arachis hypogaea HOM05D005913 ORTHO05D007138 9.2e-49 198.0 172 58.7
AUR62001638 Chenopodium quinoa HOM05D005913 ORTHO05D007138 1.2e-48 197.6 214 52.8
Ciclev10029073m.g Citrus clementina HOM05D005913 ORTHO05D007138 1.6e-48 197.2 212 55.2
Psat3g002480 Pisum sativum HOM05D005913 ORTHO05D007138 1.6e-48 197.2 212 52.4
Cpa.g.sc112.8 Carica papaya HOM05D005913 ORTHO05D007138 3.9e-47 192.6 221 50.2
Ca_09509_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 3.9e-47 192.6 213 52.1
Ca_30058_v3 Cicer arietinum L. HOM05D000390 ORTHO05D007138 3.9e-47 192.6 213 52.1
LjContig00155g0009730 Lotus japonicus HOM05D005913 ORTHO05D007138 7.3e-46 188.3 215 50.2
Manes.10G106300 Manihot esculenta HOM05D005913 ORTHO05D007138 9.5e-46 188.0 231 47.6
Cc01_g14290 Coffea canephora HOM05D005913 ORTHO05D007138 1.2e-45 187.6 212 51.9
PGR044G1475 Punica granatum HOM05D005913 ORTHO05D007138 3.6e-45 186.0 185 53.0
COL.COLO4_19170 Corchorus olitorius HOM05D005913 ORTHO05D001548 4.7e-45 185.7 224 50.0
Sabra06G0131300 Salix brachista HOM05D005913 ORTHO05D007138 4.7e-45 185.7 218 52.3
Medtr7g117410 Medicago truncatula HOM05D005913 ORTHO05D007138 3.1e-44 183.0 214 51.9
Hund09257 Selenicereus undatus HOM05D005913 ORTHO05D007138 4.0e-44 182.6 216 51.9
ATR0681G105 Amborella trichopoda HOM05D005913 ORTHO05D007138 2.6e-43 179.9 173 57.2
DCAR_012499 Daucus carota HOM05D005913 ORTHO05D007138 2.6e-43 179.9 185 54.1
Potri.006G170500 Populus trichocarpa HOM05D005913 ORTHO05D007138 2.9e-42 176.4 216 51.4
VMungo0647G0764 Vigna mungo HOM05D005913 ORTHO05D007138 1.4e-41 174.1 213 48.4
CDE04G2770 Ceratophyllum demersum HOM05D005913 ORTHO05D007138 2.7e-40 169.9 212 51.4
HPP92_028632 Vanilla planifolia HOM05D005913 ORTHO05D007138 6.0e-40 168.7 186 53.2
EL10Ac7g16180 Beta vulgaris HOM05D005913 ORTHO05D007138 1.7e-39 167.2 213 47.4
Glyma.05G235600 Glycine max HOM05D005913 ORTHO05D007138 3.0e-39 166.4 213 46.9
Phvul.001G033300 Phaseolus vulgaris HOM05D005913 ORTHO05D007138 6.6e-39 165.2 138 65.2
Lj4A493T9 Lonicera japonica HOM05D005913 ORTHO05D007138 5.6e-38 162.2 183 50.8
Ah.15g099480 Amaranthus hybridus HOM05D005913 ORTHO05D007138 1.1e-36 157.9 212 43.4
SalBow6G3913 Salvia bowleyana HOM05D005913 ORTHO05D007138 2.4e-36 156.8 187 50.3
HPP92_002930 Vanilla planifolia HOM05D005913 ORTHO05D007138 1.4e-33 147.5 186 48.9
ClCG02G019520 Citrullus lanatus HOM05D005913 ORTHO05D007138 3.2e-33 146.4 179 46.4
Atru.chr3.4201 Acer truncatum HOM05D005913 ORTHO05D007138 1.6e-32 144.1 177 48.0
TPR.G37238 Trifolium pratense HOM05D005913 ORTHO05D007138 2.1e-32 143.7 211 43.1
Thhalv10008508m.g Eutrema salsugineum HOM05D005913 ORTHO05D007138 3.9e-31 139.4 214 41.6
Os10g0500500 Oryza sativa ssp. japonica HOM05D005913 ORTHO05D007138 3.9e-31 139.4 190 47.9
TPR.G4738 Trifolium pratense HOM05D005913 ORTHO05D007138 2.1e-29 133.7 185 42.2
CARHR006930 Cardamine hirsuta HOM05D005913 ORTHO05D007138 3.6e-29 132.9 216 38.4
Sp1g05970 Schrenkiella parvula HOM05D005913 ORTHO05D007138 8.1e-29 131.7 215 40.0
A10p05770 Brassica napus HOM05D005913 ORTHO05D007138 1.4e-28 131.0 229 40.2
BraA10t42838Z Brassica rapa HOM05D005913 ORTHO05D007138 1.4e-28 131.0 229 40.2
MD03G1068600 Malus domestica HOM05D005913 ORTHO05D007138 5.2e-28 129.0 125 58.4
Zm00001eb012770 Zea mays HOM05D005913 ORTHO05D007138 1.5e-27 127.5 204 41.2
C05p05290 Brassica napus HOM05D005913 ORTHO05D007138 2.6e-27 126.7 196 42.3
BolC5t29300H Brassica oleracea HOM05D005913 ORTHO05D007138 2.6e-27 126.7 196 42.3
BraA09t41996Z Brassica rapa HOM05D005913 ORTHO05D007138 7.6e-27 125.2 211 40.3
SEGI_23907 Sequoiadendron giganteum HOM05D005913 ORTHO05D007138 4.9e-26 122.5 152 49.3
BolC8t52604H Brassica oleracea HOM05D005913 ORTHO05D007138 8.4e-26 121.7 211 38.9
Aa31LG1G6450 Aethionema arabicum HOM05D005913 ORTHO05D007138 1.9e-25 120.6 188 38.8
Carub.0001s0651 Capsella rubella HOM05D005913 ORTHO05D007138 4.2e-25 119.4 216 38.0
A09p66580 Brassica napus HOM05D005913 ORTHO05D007138 1.6e-24 117.5 211 38.4
Zm00001eb142300 Zea mays HOM05D005913 ORTHO05D007138 2.7e-24 116.7 113 54.0
BcaC07g42020 Brassica carinata HOM05D005913 ORTHO05D007138 6.0e-24 115.5 234 35.5
C08p50760 Brassica napus HOM05D005913 ORTHO05D007138 6.0e-24 115.5 234 35.5
AT1G07210 Arabidopsis thaliana HOM05D005913 ORTHO05D007138 2.3e-23 113.6 222 36.9
AL1G17350 Arabidopsis lyrata HOM05D005913 ORTHO05D007138 1.5e-22 110.9 223 37.2
BcaC07g42452 Brassica carinata HOM05D005913 ORTHO05D007138 3.6e-21 106.3 110 50.0
unitig_26.g9973 Utricularia gibba HOM05D005913 ORTHO05D007138 2.6e-19 100.1 64 76.6
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 1.4e-12 77.8 146 39.0
BcaB07g33371 Brassica carinata HOM05D005913 ORTHO05D007138 5.3e-12 75.9 111 38.7
Mapoly0046s0093 Marchantia polymorpha HOM05D005913 ORTHO05D007138 9.0e-12 75.1 172 34.3
MD03G1068700 Malus domestica HOM05D005913 ORTHO05D007138 1.2e-11 74.7 43 86.0
SHI19145 Sapria himalayana HOM05D000002 ORTHO05D000001 3.8e-10 69.7 106 38.7
BcaC07g42451 Brassica carinata HOM05D005913 ORTHO05D007138 1.4e-09 67.8 51 60.8
Pp3c9_1670 Physcomitrium patens HOM05D005913 ORTHO05D007138 5.5e-09 65.9 169 29.0
AagrBONN_evm.TU.Sc2ySwM_362.942 Anthoceros agrestis HOM05D005913 ORTHO05D007138 9.3e-09 65.1 203 29.6


User provided reference genes

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