Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia13384 Actinidia chinensis HOM05D007152 ORTHO05D008912 1.7e-70 269.6 179 100.0
Actinidia14275 Actinidia chinensis HOM05D007152 ORTHO05D008912 4.5e-47 191.8 164 71.3
Dinv44343 Davidia involucrata HOM05D007152 ORTHO05D008912 2.1e-28 129.8 187 49.7
Nitab4.5_0007965g0010 Nicotiana tabacum HOM05D007152 ORTHO05D008912 1.0e-27 127.5 191 49.2
Hma1.2p1_1352F.1_g277500 Hydrangea macrophylla HOM05D007152 ORTHO05D008912 4.4e-26 122.1 180 51.7
PGSC0003DMG400017287 Solanum tuberosum HOM05D007152 ORTHO05D008912 1.2e-23 114.0 192 44.3
MBI18_g04558_MAGBIO Magnolia biondii HOM05D000387 ORTHO05D008912 2.6e-23 112.8 165 44.8
Cc03_g01440 Coffea canephora HOM05D007152 ORTHO05D008912 7.7e-23 111.3 174 57.5
CSS0046950 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 1.1e-21 107.5 188 57.4
CANSAT78G0935 Cannabis sativa HOM05D007152 ORTHO05D008912 3.2e-21 105.9 185 45.4
QL06p010801 Quercus lobata HOM05D007152 ORTHO05D008912 4.2e-21 105.5 173 45.1
CSS0044056 Camellia sinensis var. sinensis HOM05D007152 ORTHO05D008912 9.4e-21 104.4 188 56.4
Gohir.D10G173100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 4.7e-20 102.1 194 38.1
CiPaw.02G079300 Carya illinoinensis HOM05D007152 ORTHO05D008912 8.0e-20 101.3 171 53.8
MD16G1162700 Malus domestica HOM05D007152 ORTHO05D008912 3.0e-19 99.4 189 55.6
Prupe.1G130200 Prunus persica HOM05D007152 ORTHO05D008912 3.0e-19 99.4 131 70.2
Haze_01149 Corylus avellana HOM05D007152 ORTHO05D008912 5.2e-19 98.6 168 44.6
Thecc.04G290300 Theobroma cacao HOM05D007152 ORTHO05D008912 8.8e-19 97.8 194 37.6
Gohir.A10G167100 Gossypium hirsutum HOM05D007152 ORTHO05D008912 1.2e-18 97.4 192 37.0
TAR362G0707 Trochodendron aralioides HOM05D007152 ORTHO05D008912 2.0e-18 96.7 192 39.6
Gorai.011G193700 Gossypium raimondii HOM05D007152 ORTHO05D008912 3.4e-18 95.9 192 36.5
GSVIVG01035097001 Vitis vinifera HOM05D007152 ORTHO05D008912 3.4e-18 95.9 186 41.9
RcHm_v2.0_Chr4g0423591 Rosa chinensis HOM05D007152 ORTHO05D008912 5.7e-18 95.1 187 55.6
FvH4_4g18790 Fragaria vesca HOM05D007152 ORTHO05D008912 7.5e-18 94.7 186 54.8
FAN12G2857 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.5e-18 94.7 186 54.8
FAN12G4239 Fragaria x ananassa HOM05D007152 ORTHO05D008912 1.7e-17 93.6 186 54.3
Migut.G00085 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.8e-17 92.8 56 71.4
FAN17G1647 Fragaria x ananassa HOM05D007152 ORTHO05D008912 2.8e-17 92.8 181 55.8
Nitab4.5_0000306g0360 Nicotiana tabacum HOM05D007152 ORTHO05D008912 6.3e-17 91.7 165 55.8
SalBow2G3473 Salvia bowleyana HOM05D007152 ORTHO05D008912 6.3e-17 91.7 178 36.5
CiPaw.01G144800 Carya illinoinensis HOM05D007152 ORTHO05D008912 1.1e-16 90.9 170 45.3
Migut.G00124 Erythranthe guttata HOM05D007152 ORTHO05D008912 2.4e-16 89.7 175 40.6
Manes.03G199400 Manihot esculenta HOM05D007152 ORTHO05D008912 2.4e-16 89.7 174 41.4
Nn6g34202 Nelumbo nucifera HOM05D007152 ORTHO05D008912 2.4e-16 89.7 184 37.0
Peaxi162Scf00065g10111 Petunia axillaris HOM05D007152 ORTHO05D008912 4.1e-16 89.0 166 45.2
FAN07G1963 Fragaria x ananassa HOM05D007152 ORTHO05D008912 7.0e-16 88.2 181 55.8
THA.LOC104818902 Tarenaya hassleriana HOM05D007152 ORTHO05D008912 9.1e-16 87.8 190 36.8
MELO3C021305.2 Cucumis melo HOM05D007152 ORTHO05D008912 1.2e-15 87.4 198 35.4
Duzib212G0417 Durio zibethinus HOM05D007152 ORTHO05D008912 1.2e-15 87.4 198 34.3
Sc13g0003130 Simmondsia chinensis HOM05D007152 ORTHO05D008912 2.0e-15 86.7 142 54.2
Dinv29715 Davidia involucrata HOM05D007152 ORTHO05D008912 3.5e-15 85.9 160 61.2
Atru.chr4.2916 Acer truncatum HOM05D007152 ORTHO05D008912 2.9e-14 82.8 170 42.9
DCAR_027047 Daucus carota HOM05D007152 ORTHO05D008912 3.8e-14 82.4 171 42.1
ClCG06G004920 Citrullus lanatus HOM05D007152 ORTHO05D008912 5.0e-14 82.0 206 33.0
Eucgr.B01571 Eucalyptus grandis HOM05D007152 ORTHO05D008912 5.0e-14 82.0 162 46.9
Manes.15G009801 Manihot esculenta HOM05D007152 ORTHO05D008912 5.0e-14 82.0 70 55.7
Phvul.003G108000 Phaseolus vulgaris HOM05D007152 ORTHO05D008912 6.5e-14 81.6 171 39.8
VMungo1215G1115 Vigna mungo HOM05D007152 ORTHO05D008912 6.5e-14 81.6 171 38.6
Lsat_1_v5_gn_3_21801 Lactuca sativa HOM05D007152 ORTHO05D008912 8.5e-14 81.3 173 39.9
Medtr4g120400 Medicago truncatula HOM05D007152 ORTHO05D008912 1.1e-13 80.9 167 55.1
TWI73G1002 Tripterygium wilfordii HOM05D007152 ORTHO05D008912 1.1e-13 80.9 192 39.1
COL.COLO4_13806 Corchorus olitorius HOM05D007152 ORTHO05D008912 1.9e-13 80.1 188 31.9
Ca_21475_v3 Cicer arietinum L. HOM05D007152 ORTHO05D008912 2.5e-13 79.7 164 50.6
Sed0011406 Sechium edule HOM05D007152 ORTHO05D008912 2.5e-13 79.7 200 47.5
Solyc07g055660.2 Solanum lycopersicum HOM05D007152 ORTHO05D008912 3.2e-13 79.3 188 34.6
Aa31LG5G17390 Aethionema arabicum HOM05D007152 ORTHO05D008912 4.2e-13 79.0 185 37.8
Glyma.17G029000 Glycine max HOM05D007152 ORTHO05D008912 4.2e-13 79.0 165 39.4
CARHR081420 Cardamine hirsuta HOM05D007152 ORTHO05D008912 5.5e-13 78.6 186 36.6
Potri.010G006600 Populus trichocarpa HOM05D007152 ORTHO05D008912 7.2e-13 78.2 60 65.0
PGR004G0508 Punica granatum HOM05D007152 ORTHO05D008912 9.4e-13 77.8 185 35.1
CsaV3_6G022730 Cucumis sativus L. HOM05D007152 ORTHO05D008912 1.2e-12 77.4 150 38.0
Sabra10G0005500 Salix brachista HOM05D007152 ORTHO05D008912 1.6e-12 77.0 60 65.0
Ah.04g153700 Amaranthus hybridus HOM05D007152 ORTHO05D008912 4.7e-12 75.5 61 57.4
Cfa015435 Carpinus fangiana HOM05D007152 ORTHO05D008912 6.1e-12 75.1 168 45.2
Duzib151G0510 Durio zibethinus HOM05D007152 ORTHO05D008912 6.1e-12 75.1 190 36.8
Sopen07g029030 Solanum pennellii HOM05D007152 ORTHO05D008912 6.1e-12 75.1 212 33.5
Lsat_1_v5_gn_6_76040 Lactuca sativa HOM05D007152 ORTHO05D008912 8.0e-12 74.7 177 41.8
SGA_v2.0_scaffold18G08363 Striga asiatica HOM05D007152 ORTHO05D008912 8.0e-12 74.7 66 63.6
ECA246G2204 Erigeron canadensis HOM05D007152 ORTHO05D008912 3.0e-11 72.8 166 32.5
Lalb_Chr20g0121161 Lupinus albus HOM05D007152 ORTHO05D008912 4.0e-11 72.4 55 60.0
AL3G17910 Arabidopsis lyrata HOM05D007152 ORTHO05D008912 6.8e-11 71.6 189 42.9
Nn4g25735 Nelumbo nucifera HOM05D007152 ORTHO05D008912 8.8e-11 71.2 155 37.4
Nn2g11629 Nelumbo nucifera HOM05D000191 ORTHO05D000122 1.2e-10 70.9 150 33.3
Aqoxy2G02883 Aquilegia oxysepala HOM05D007152 ORTHO05D008912 1.5e-10 70.5 178 34.8
AT3G06780 Arabidopsis thaliana HOM05D007152 ORTHO05D008912 1.5e-10 70.5 190 41.6
C05p60530 Brassica napus HOM05D007152 ORTHO05D008912 1.5e-10 70.5 187 34.8
BolC5t34707H Brassica oleracea HOM05D007152 ORTHO05D008912 1.5e-10 70.5 187 34.8
Carub.0003s0633 Capsella rubella HOM05D007152 ORTHO05D008912 1.5e-10 70.5 189 36.0
Lj4g0009216 Lotus japonicus HOM05D007152 ORTHO05D008912 3.4e-10 69.3 163 36.8
Potri.008G211000 Populus trichocarpa HOM05D007152 ORTHO05D008912 9.8e-10 67.8 55 61.8
BNapus_Darmor_BZH_scaffold_117p00080 Brassica napus HOM05D007152 ORTHO05D008912 1.7e-09 67.0 165 38.8
Ciclev10006039m.g Citrus clementina HOM05D007152 ORTHO05D008912 2.2e-09 66.6 168 46.4
A03p34880 Brassica napus HOM05D007152 ORTHO05D008912 3.7e-09 65.9 45 68.9
Glyma.07G244800 Glycine max HOM05D007152 ORTHO05D008912 6.3e-09 65.1 164 37.2
EL10Ac3g06653 Beta vulgaris HOM05D007152 ORTHO05D008912 1.8e-08 63.5 47 61.7
HanXRQChr07g0199211 Helianthus annuus HOM05D007152 ORTHO05D008912 4.1e-08 62.4 46 56.5
Lalb_Chr12g0201151 Lupinus albus HOM05D007152 ORTHO05D008912 4.1e-08 62.4 161 37.9
Thhalv10022432m.g Eutrema salsugineum HOM05D007152 ORTHO05D008912 5.4e-08 62.0 188 33.5
BolC3t16516H Brassica oleracea HOM05D007152 ORTHO05D008912 7.0e-08 61.6 188 33.5
AUR62018060 Chenopodium quinoa HOM05D007152 ORTHO05D008912 7.0e-08 61.6 169 50.9
Sabra08G0151100 Salix brachista HOM05D007152 ORTHO05D008912 4.5e-07 58.9 49 61.2
BraA01t04415Z Brassica rapa HOM05D007152 ORTHO05D008912 5.9e-07 58.5 165 37.6
RcHm_v2.0_Chr7g0221621 Rosa chinensis HOM05D007152 ORTHO05D008912 7.7e-07 58.2 48 56.2
A05p41300 Brassica napus HOM05D007152 ORTHO05D008912 1.0e-06 57.8 141 36.9
BraA05t22853Z Brassica rapa HOM05D007152 ORTHO05D008912 1.0e-06 57.8 141 36.9
TPR.G22774 Trifolium pratense HOM05D007152 ORTHO05D008912 1.7e-06 57.0 53 56.6
ECA240G1188 Erigeron canadensis HOM05D007152 ORTHO05D008912 5.0e-06 55.5 180 32.2
C03p42450 Brassica napus HOM05D007152 ORTHO05D008912 6.6e-06 55.1 183 32.8
PSO407G0318 Papaver somniferum HOM05D007152 ORTHO05D008912 8.6e-06 54.7 40 60.0


User provided reference genes

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