Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia13304 Actinidia chinensis HOM05D006214 ORTHO05D007723 9.4e-86 320.1 154 100.0
Actinidia31216 Actinidia chinensis HOM05D006214 ORTHO05D007723 1.1e-78 296.6 152 92.8
Dinv30243 Davidia involucrata HOM05D006214 ORTHO05D007723 1.5e-78 296.2 153 90.2
Nitab4.5_0002393g0090 Nicotiana tabacum HOM05D006214 ORTHO05D007723 8.0e-77 290.4 151 90.1
Potri.006G244300 Populus trichocarpa HOM05D006214 ORTHO05D007723 6.8e-76 287.3 153 87.6
Nitab4.5_0000250g0190 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.2e-75 286.6 153 87.6
Thecc.09G038200 Theobroma cacao HOM05D006214 ORTHO05D007723 1.2e-75 286.6 153 87.6
Oeu011261.1 Olea europaea HOM05D006214 ORTHO05D007723 1.5e-75 286.2 153 86.3
PGSC0003DMG400014492 Solanum tuberosum HOM05D006214 ORTHO05D007723 2.6e-75 285.4 153 87.6
COL.COLO4_18710 Corchorus olitorius HOM05D006214 ORTHO05D007723 5.7e-75 284.3 153 86.3
Solyc08g068070.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 5.7e-75 284.3 153 86.9
Nn8g39214 Nelumbo nucifera HOM05D006214 ORTHO05D007723 7.5e-75 283.9 153 87.6
Oeu014655.1 Olea europaea HOM05D006214 ORTHO05D007723 1.7e-74 282.7 153 85.6
Migut.A00249 Erythranthe guttata HOM05D006214 ORTHO05D007723 2.2e-74 282.3 151 88.7
QL12p026136 Quercus lobata HOM05D006214 ORTHO05D007723 2.2e-74 282.3 153 86.3
Cpa.g.sc205.8 Carica papaya HOM05D006214 ORTHO05D007723 2.8e-74 282.0 151 87.4
Ciclev10009715m.g Citrus clementina HOM05D006214 ORTHO05D007723 2.8e-74 282.0 151 87.4
Aqoxy7G01701 Aquilegia oxysepala HOM05D006214 ORTHO05D007723 3.7e-74 281.6 152 89.5
Hma1.2p1_0003F.1_g003500 Hydrangea macrophylla HOM05D006214 ORTHO05D007723 3.7e-74 281.6 153 86.3
Manes.03G064300 Manihot esculenta HOM05D006214 ORTHO05D007723 3.7e-74 281.6 153 85.6
PSO063G0005 Papaver somniferum HOM05D006214 ORTHO05D007723 4.8e-74 281.2 152 87.5
CANSAT25G2048 Cannabis sativa HOM05D006214 ORTHO05D007723 6.3e-74 280.8 152 86.8
PSO782G3114 Papaver somniferum HOM05D006214 ORTHO05D007723 6.3e-74 280.8 153 86.3
PGR044G2495 Punica granatum HOM05D006214 ORTHO05D007723 8.3e-74 280.4 153 86.3
Sc06g0000690 Simmondsia chinensis HOM05D006214 ORTHO05D007723 1.1e-73 280.0 151 86.1
GSVIVG01035713001 Vitis vinifera HOM05D006214 ORTHO05D007723 1.4e-73 279.6 153 85.6
Sopen08g021960 Solanum pennellii HOM05D006214 ORTHO05D007723 1.8e-73 279.3 153 85.6
TWI34G1412 Tripterygium wilfordii HOM05D006214 ORTHO05D007723 2.4e-73 278.9 153 84.3
Rhsim02G0184100 Rhododendron simsii HOM05D006214 ORTHO05D007723 3.1e-73 278.5 150 88.0
THA.LOC104803814 Tarenaya hassleriana HOM05D006214 ORTHO05D007723 4.1e-73 278.1 153 85.0
CSS0015630 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.4e-73 277.7 153 85.6
CSS0049547 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 5.4e-73 277.7 153 85.6
Eucgr.C02883 Eucalyptus grandis HOM05D006214 ORTHO05D007723 5.4e-73 277.7 153 85.0
DCAR_001036 Daucus carota HOM05D006214 ORTHO05D007723 7.0e-73 277.3 151 86.8
Prupe.1G454300 Prunus persica HOM05D006214 ORTHO05D007723 1.2e-72 276.6 152 84.2
AUR62032401 Chenopodium quinoa HOM05D006214 ORTHO05D007723 1.6e-72 276.2 153 85.0
Lsat_1_v5_gn_6_11341 Lactuca sativa HOM05D006214 ORTHO05D007723 1.6e-72 276.2 153 83.7
CiPaw.07G208400 Carya illinoinensis HOM05D006214 ORTHO05D007723 2.7e-72 275.4 151 85.4
RcHm_v2.0_Chr6g0305591 Rosa chinensis HOM05D006214 ORTHO05D007723 2.7e-72 275.4 152 84.9
A01p05650 Brassica napus HOM05D003889 ORTHO05D004407 4.5e-72 274.6 153 83.0
BraA01t00535Z Brassica rapa HOM05D003889 ORTHO05D004407 4.5e-72 274.6 153 83.0
MELO3C011160.2 Cucumis melo HOM05D006214 ORTHO05D007723 4.5e-72 274.6 153 83.0
Lalb_Chr22g0361001 Lupinus albus HOM05D006214 ORTHO05D007723 5.9e-72 274.2 153 83.0
Cc08_g08530 Coffea canephora HOM05D006214 ORTHO05D007723 1.0e-71 273.5 153 83.7
Duzib150G0825 Durio zibethinus HOM05D006214 ORTHO05D007723 1.0e-71 273.5 154 83.8
Thhalv10026389m.g Eutrema salsugineum HOM05D006214 ORTHO05D007723 2.2e-71 272.3 153 83.7
Medtr1g008700 Medicago truncatula HOM05D006214 ORTHO05D007723 2.2e-71 272.3 152 84.9
SGA_v2.0_scaffold27G11530 Striga asiatica HOM05D006214 ORTHO05D007723 6.5e-71 270.8 160 80.6
Aa31LG2G16930 Aethionema arabicum HOM05D006214 ORTHO05D007723 8.5e-71 270.4 153 82.4
C01p06220 Brassica napus HOM05D003889 ORTHO05D004407 1.1e-70 270.0 154 82.5
BolC1t00620H Brassica oleracea HOM05D006214 ORTHO05D007723 1.1e-70 270.0 154 82.5
CsaV3_2G031100 Cucumis sativus L. HOM05D006214 ORTHO05D007723 1.1e-70 270.0 153 82.4
Gohir.D13G192400 Gossypium hirsutum HOM05D006214 ORTHO05D007723 1.9e-70 269.2 152 82.9
Gorai.013G218300 Gossypium raimondii HOM05D006214 ORTHO05D007723 1.9e-70 269.2 152 82.9
Sp7g30450 Schrenkiella parvula HOM05D006214 ORTHO05D007723 3.2e-70 268.5 153 81.7
HanXRQChr07g0192221 Helianthus annuus HOM05D006214 ORTHO05D007723 4.2e-70 268.1 153 81.7
Manes.16G067000 Manihot esculenta HOM05D006214 ORTHO05D007723 4.2e-70 268.1 153 82.4
Hund25645 Selenicereus undatus HOM05D006214 ORTHO05D007723 4.2e-70 268.1 153 83.0
FAN15G3028 Fragaria x ananassa HOM05D006214 ORTHO05D007723 5.5e-70 267.7 152 80.9
CiPaw.08G022500 Carya illinoinensis HOM05D006214 ORTHO05D007723 7.2e-70 267.3 151 82.1
Sed0020806 Sechium edule HOM05D006214 ORTHO05D007723 9.4e-70 266.9 153 80.4
TAR624G0931 Trochodendron aralioides HOM05D006214 ORTHO05D007723 9.4e-70 266.9 153 83.7
CARHR240670 Cardamine hirsuta HOM05D006214 ORTHO05D007723 1.6e-69 266.2 153 82.4
Psat6g005800 Pisum sativum HOM05D006214 ORTHO05D007723 4.7e-69 264.6 151 82.8
Haze_21823 Corylus avellana HOM05D006214 ORTHO05D007723 6.1e-69 264.2 153 82.4
Peaxi162Scf00105g00059 Petunia axillaris HOM05D006214 ORTHO05D007723 6.1e-69 264.2 153 81.7
Cfa013332 Carpinus fangiana HOM05D006214 ORTHO05D007723 8.0e-69 263.8 153 82.4
ATR1120G189 Amborella trichopoda HOM05D006214 ORTHO05D007723 1.0e-68 263.5 153 80.4
VMungo0647G2273 Vigna mungo HOM05D006214 ORTHO05D007723 1.8e-68 262.7 153 82.4
AL7G19050 Arabidopsis lyrata HOM05D006214 ORTHO05D007723 2.3e-68 262.3 153 81.0
AT4G32690 Arabidopsis thaliana HOM05D006214 ORTHO05D007723 2.3e-68 262.3 153 81.0
BcaC09g52063 Brassica carinata HOM05D003889 ORTHO05D004407 2.3e-68 262.3 154 80.5
Lalb_Chr08g0243361 Lupinus albus HOM05D006214 ORTHO05D007723 2.3e-68 262.3 155 81.3
Solyc08g068090.3 Solanum lycopersicum HOM05D006214 ORTHO05D007723 3.0e-68 261.9 153 80.4
arahy.Tifrunner.gnm1.ann1.72Y1Y4 Arachis hypogaea HOM05D006214 ORTHO05D007723 4.0e-68 261.5 153 81.7
Carub.0007s0784 Capsella rubella HOM05D006214 ORTHO05D007723 5.2e-68 261.2 153 80.4
Lj1g0018927 Lotus japonicus HOM05D006214 ORTHO05D007723 8.8e-68 260.4 153 80.4
Sopen08g021970 Solanum pennellii HOM05D006214 ORTHO05D007723 1.2e-67 260.0 153 80.4
VMungo1309G2769 Vigna mungo HOM05D006214 ORTHO05D007723 1.2e-67 260.0 149 82.6
TPR.G12079 Trifolium pratense HOM05D006214 ORTHO05D007723 1.5e-67 259.6 151 81.5
MD15G1099500 Malus domestica HOM05D006214 ORTHO05D007723 2.6e-67 258.8 153 79.7
Lj1g0018426 Lotus japonicus HOM05D006214 ORTHO05D007723 3.4e-67 258.5 153 80.4
Psat0s1478g0160 Pisum sativum HOM05D006214 ORTHO05D007723 3.4e-67 258.5 149 81.2
SEGI_02532 Sequoiadendron giganteum HOM05D006214 ORTHO05D007723 4.4e-67 258.1 153 78.4
Ca_12821_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.7e-67 257.7 153 79.1
Ca_12822_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 5.7e-67 257.7 153 79.1
Glyma.14G140400 Glycine max HOM05D006214 ORTHO05D007723 5.7e-67 257.7 153 80.4
Lj8A606G25 Lonicera japonica HOM05D006214 ORTHO05D007723 9.8e-67 256.9 186 69.9
Phvul.001G060001 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 9.8e-67 256.9 153 80.4
Duzib168G0494 Durio zibethinus HOM05D006214 ORTHO05D007723 2.2e-66 255.8 153 79.1
arahy.Tifrunner.gnm1.ann1.8TR5WT Arachis hypogaea HOM05D006214 ORTHO05D007723 4.9e-66 254.6 153 79.1
Phvul.009G104900 Phaseolus vulgaris HOM05D006214 ORTHO05D007723 6.3e-66 254.2 151 78.1
Medtr3g109420 Medicago truncatula HOM05D006214 ORTHO05D007723 1.1e-65 253.4 149 80.5
FAN20G2536 Fragaria x ananassa HOM05D006214 ORTHO05D007723 1.4e-65 253.1 152 77.6
Ah.12g061040 Amaranthus hybridus HOM05D006214 ORTHO05D007723 2.4e-65 252.3 153 81.7
FvH4_2g36290 Fragaria vesca HOM05D006214 ORTHO05D007723 3.1e-65 251.9 152 77.0
Atru.chr7.2182 Acer truncatum HOM05D006214 ORTHO05D007723 2.0e-64 249.2 139 81.3
Atru.chr7.2299 Acer truncatum HOM05D006214 ORTHO05D007723 2.0e-64 249.2 139 81.3
Ca_15627_v3 Cicer arietinum L. HOM05D006214 ORTHO05D007723 2.0e-64 249.2 145 80.0
Glyma.04G079200 Glycine max HOM05D006214 ORTHO05D007723 2.0e-64 249.2 149 78.5
FAN27G2409 Fragaria x ananassa HOM05D006214 ORTHO05D007723 2.7e-64 248.8 152 76.3
Zm00001eb386050 Zea mays HOM05D006214 ORTHO05D007723 5.9e-64 247.7 156 75.6
TPR.G1342 Trifolium pratense HOM05D006214 ORTHO05D007723 2.3e-63 245.7 151 78.8
Eucgr.L03669 Eucalyptus grandis HOM05D006214 ORTHO05D007723 2.5e-62 242.3 153 77.1
HPP92_005176 Vanilla planifolia HOM05D006214 ORTHO05D007723 4.2e-62 241.5 184 65.8
Os06g0591600 Oryza sativa ssp. japonica HOM05D006214 ORTHO05D007723 5.5e-62 241.1 155 74.2
SMO164G0258 Selaginella moellendorffii HOM05D006214 ORTHO05D007723 1.2e-59 233.4 150 73.3
Gohir.D05G051050 Gossypium hirsutum HOM05D006214 ORTHO05D007723 2.4e-57 225.7 175 65.1
arahy.Tifrunner.gnm1.ann1.LJ0T63 Arachis hypogaea HOM05D006214 ORTHO05D007723 7.0e-57 224.2 142 76.1
AagrBONN_evm.TU.Sc2ySwM_368.1910 Anthoceros agrestis HOM05D006214 ORTHO05D007723 2.0e-56 222.6 155 70.3
CAN.G886.7 Capsicum annuum HOM05D006214 ORTHO05D007723 5.9e-56 221.1 134 79.9
Pp3c1_3380 Physcomitrium patens HOM05D006214 ORTHO05D007723 1.7e-55 219.5 151 68.2
Pp3c6_250 Physcomitrium patens HOM05D006214 ORTHO05D007723 8.6e-55 217.2 150 67.3
Sabra06G0191200 Salix brachista HOM05D006214 ORTHO05D007723 8.6e-55 217.2 154 72.1
unitig_0.g2807 Utricularia gibba HOM05D006435 ORTHO05D008262 8.6e-55 217.2 141 73.8
ECA233G3302 Erigeron canadensis HOM05D006214 ORTHO05D007723 8.9e-52 207.2 299 42.1
AUR62024819 Chenopodium quinoa HOM05D006214 ORTHO05D007723 2.9e-50 202.2 109 84.4
Gorai.009G052700 Gossypium raimondii HOM05D006214 ORTHO05D007723 6.6e-47 191.0 108 81.5
EL10Ac2g02522 Beta vulgaris HOM05D006214 ORTHO05D007723 5.8e-43 177.9 153 62.7
MBI04_g08934_MAGBIO Magnolia biondii HOM05D006214 ORTHO05D003073 3.3e-38 162.2 121 66.1
TAR636G1550 Trochodendron aralioides HOM05D006214 ORTHO05D007723 2.6e-35 152.5 87 83.9
ClCG08G012410 Citrullus lanatus HOM05D006214 ORTHO05D007723 2.7e-32 142.5 131 58.0
CSS0020447 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 2.5e-30 136.0 84 82.1
Lsat_1_v5_gn_6_11301 Lactuca sativa HOM05D006214 ORTHO05D007723 1.4e-25 120.2 66 84.8
CSS0007395 Camellia sinensis var. sinensis HOM05D006214 ORTHO05D007723 1.2e-24 117.1 63 81.0
Potri.018G036200 Populus trichocarpa HOM05D006214 ORTHO05D007723 1.5e-22 110.2 64 76.6
C01p47490 Brassica napus HOM05D006214 ORTHO05D007723 4.8e-21 105.1 55 81.8
BolC1t04720H Brassica oleracea HOM05D006214 ORTHO05D007723 6.6e-15 84.7 44 79.5
Peaxi162Scf00105g00513 Petunia axillaris HOM05D006214 ORTHO05D007723 5.6e-14 81.6 82 51.2
arahy.Tifrunner.gnm1.ann1.YGZX15 Arachis hypogaea HOM05D000254 ORTHO05D000165 4.5e-11 72.0 127 37.8
Glyma.06G080700 Glycine max HOM05D006214 ORTHO05D007723 7.6e-11 71.2 52 59.6
HanXRQChr07g0195131 Helianthus annuus HOM05D006214 ORTHO05D007723 2.2e-10 69.7 81 50.6
Nitab4.5_0000250g0200 Nicotiana tabacum HOM05D006214 ORTHO05D007723 1.6e-08 63.5 39 71.8


User provided reference genes

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