Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia13105 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.4e-208 727.2 386 100.0
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.7e-157 557.8 374 82.1
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.5e-76 290.8 379 52.2
CSS0008335 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.2e-75 287.0 386 52.6
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 7.4e-63 245.4 380 45.8
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 1.5e-39 167.9 387 36.2
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 3.3e-39 166.8 386 37.0
vmacro20060 Vaccinium macrocarpon HOM05D003265 ORTHO05D003819 3.7e-38 163.3 297 42.1
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.7e-36 155.6 193 51.8
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.1e-34 151.8 402 34.1
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 3.7e-30 136.7 387 34.1
Sabra06G0103300 Salix brachista HOM05D003265 ORTHO05D003819 2.0e-28 131.0 346 33.8
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 2.6e-28 130.6 192 47.4
Potri.006G131650 Populus trichocarpa HOM05D003265 ORTHO05D003819 2.2e-27 127.5 359 34.0
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 5.5e-26 122.9 307 33.6
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 2.1e-25 120.9 298 36.6
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 2.0e-23 114.4 290 38.3
Thecc.05G053900 Theobroma cacao HOM05D003265 ORTHO05D003819 2.6e-23 114.0 348 32.5
Ciclev10011133m.g Citrus clementina HOM05D003265 ORTHO05D003819 5.7e-23 112.8 297 34.0
Sabra16G0092200 Salix brachista HOM05D003265 ORTHO05D003819 1.3e-22 111.7 306 33.3
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 4.8e-22 109.8 286 33.2
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 8.2e-22 109.0 315 33.3
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 8.5e-19 99.0 369 29.3
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.6e-17 94.7 289 33.2
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 1.6e-17 94.7 289 33.2
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 3.6e-17 93.6 345 32.5
Duzib106G1383 Durio zibethinus HOM05D003265 ORTHO05D003819 3.6e-17 93.6 366 29.8
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 6.1e-17 92.8 354 28.8
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 8.0e-17 92.4 238 37.4
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 8.0e-17 92.4 251 36.3
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 1.8e-16 91.3 258 34.1
FAN09G0144 Fragaria x ananassa HOM05D003265 ORTHO05D003819 3.0e-16 90.5 275 35.3
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 5.2e-16 89.7 325 31.4
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 6.8e-16 89.4 264 34.5
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 6.8e-16 89.4 178 39.3
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.5e-15 88.2 230 37.4
MSTRG.10296 Avicennia marina HOM05D003265 ORTHO05D003819 9.8e-15 85.5 183 42.6
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 1.7e-14 84.7 268 29.9
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 1.7e-14 84.7 315 33.0
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.8e-14 84.0 371 28.6
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 2.8e-14 84.0 263 35.7
Oeu026844.1 Olea europaea HOM05D003265 ORTHO05D003819 3.7e-14 83.6 211 34.6
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 6.3e-14 82.8 195 37.4
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 2.4e-13 80.9 216 35.6
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 2.0e-12 77.8 371 29.1
Cpa.g.sc114.39 Carica papaya HOM05D000666 ORTHO05D001431 4.5e-12 76.6 358 28.8
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 4.5e-12 76.6 156 39.7
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 5.9e-12 76.3 351 25.6
Glyma.19G178700 Glycine max HOM05D003265 ORTHO05D003819 1.0e-11 75.5 388 26.3
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 1.0e-11 75.5 233 33.5
SalBow4G0859 Salvia bowleyana HOM05D003265 ORTHO05D003819 2.3e-11 74.3 211 35.5
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 2.9e-11 73.9 374 27.5
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 8.6e-11 72.4 329 28.9
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 2.5e-10 70.9 292 30.8
Gorai.006G168800 Gossypium raimondii HOM05D003265 ORTHO05D003819 4.2e-10 70.1 265 29.8
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 7.2e-10 69.3 202 34.2
ECA248G3421 Erigeron canadensis HOM05D002706 ORTHO05D003253 9.5e-10 68.9 138 34.8
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.6e-09 68.2 209 34.0
Medtr7g100700 Medicago truncatula HOM05D003265 ORTHO05D003819 2.1e-09 67.8 136 39.7
Lj1g0023124 Lotus japonicus HOM05D003265 ORTHO05D003819 2.8e-09 67.4 105 40.0
Nn2g10657 Nelumbo nucifera HOM05D003265 ORTHO05D003819 2.8e-09 67.4 159 39.0
Thecc.10G067600 Theobroma cacao HOM05D003265 ORTHO05D003819 2.8e-09 67.4 135 34.1
TPR.G36939 Trifolium pratense HOM05D003265 ORTHO05D003819 3.6e-09 67.0 62 59.7
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 6.1e-09 66.2 108 43.5
CSS0047270 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 8.0e-09 65.9 340 30.6
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 1.0e-08 65.5 77 46.8
CSS0009096 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 1.4e-08 65.1 340 30.3
COL.COLO4_23753 Corchorus olitorius HOM05D003265 ORTHO05D003819 1.4e-08 65.1 260 28.8
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 1.4e-08 65.1 370 30.8
Manes.09G080700 Manihot esculenta HOM05D003265 ORTHO05D003819 1.4e-08 65.1 180 35.0
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 1.8e-08 64.7 143 39.9
PSO339G3745 Papaver somniferum HOM05D003265 ORTHO05D003819 3.0e-08 63.9 356 27.2
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 4.0e-08 63.5 143 37.8
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 5.2e-08 63.2 91 47.3
Lalb_Chr01g0019031 Lupinus albus HOM05D003265 ORTHO05D003819 5.2e-08 63.2 96 39.6
VMungo1383G3553 Vigna mungo HOM05D003265 ORTHO05D003819 5.2e-08 63.2 89 42.7
HanXRQChr11g0350071 Helianthus annuus HOM05D003265 ORTHO05D003819 6.8e-08 62.8 127 40.2
Peaxi162Scf00005g04612 Petunia axillaris HOM05D003265 ORTHO05D003819 6.8e-08 62.8 171 36.3
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 1.2e-07 62.0 290 27.9
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 1.5e-07 61.6 389 26.0
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 2.0e-07 61.2 358 24.0
Duzib106G1563 Durio zibethinus HOM05D003265 ORTHO05D003819 3.4e-07 60.5 110 36.4
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 3.4e-07 60.5 70 52.9
Ciclev10033690m.g Citrus clementina HOM05D003265 ORTHO05D003819 5.7e-07 59.7 92 43.5
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 7.5e-07 59.3 151 38.4
CSS0007490 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.5e-07 59.3 340 30.3
arahy.Tifrunner.gnm1.ann1.1ZS95I Arachis hypogaea HOM05D003265 ORTHO05D003819 1.7e-06 58.2 130 36.2
arahy.Tifrunner.gnm1.ann1.H355B7 Arachis hypogaea HOM05D003265 ORTHO05D003819 1.7e-06 58.2 262 27.1
Gohir.A13G021500 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.7e-06 58.2 99 40.4
CSS0013290 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.2e-06 57.8 340 30.3
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 2.2e-06 57.8 158 30.4
Rhsim03G0122700 Rhododendron simsii HOM05D003265 ORTHO05D003819 2.2e-06 57.8 354 26.8
Gohir.D13G022100 Gossypium hirsutum HOM05D003265 ORTHO05D003819 2.8e-06 57.4 99 38.4
Gorai.013G024900 Gossypium raimondii HOM05D003265 ORTHO05D003819 2.8e-06 57.4 99 38.4
Aa31LG10G8510 Aethionema arabicum HOM05D003265 ORTHO05D003819 4.9e-06 56.6 102 37.3
CSS0002755 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 4.9e-06 56.6 337 29.1
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 6.3e-06 56.2 152 36.8
Lj5g0012648 Lotus japonicus HOM05D003265 ORTHO05D003819 6.3e-06 56.2 154 34.4
CSS0028328 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 8.3e-06 55.8 340 30.0


User provided reference genes

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