Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia12911 Actinidia chinensis HOM05D000045 ORTHO05D000611 6.6e-61 237.3 127 100.0
Actinidia30001 Actinidia chinensis HOM05D000045 ORTHO05D000611 1.5e-28 129.8 78 88.5
Rhsim13G0054200 Rhododendron simsii HOM05D000045 ORTHO05D000611 1.5e-20 103.2 80 76.2
CSS0013030 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 2.8e-19 99.0 72 72.2
vmacro02832 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 1.8e-18 96.3 83 69.9
Hma1.2p1_0161F.1_g071570 Hydrangea macrophylla HOM05D000045 ORTHO05D000611 4.5e-17 91.7 72 65.3
COL.COLO4_07042 Corchorus olitorius HOM05D000045 ORTHO05D000611 2.2e-16 89.4 72 63.9
QL05p019482 Quercus lobata HOM05D000045 ORTHO05D000611 5.0e-16 88.2 72 61.1
QL09p047388 Quercus lobata HOM05D000045 ORTHO05D000611 5.0e-16 88.2 72 61.1
Manes.13G055600 Manihot esculenta HOM05D000045 ORTHO05D000611 1.9e-15 86.3 72 58.3
Potri.002G239400 Populus trichocarpa HOM05D000045 ORTHO05D000611 1.9e-15 86.3 72 61.1
Atru.chr6.3530 Acer truncatum HOM05D000045 ORTHO05D000611 4.2e-15 85.1 73 54.8
Duzib133G0678 Durio zibethinus HOM05D000045 ORTHO05D000611 7.2e-15 84.3 72 58.3
Lj1A103T34 Lonicera japonica HOM05D000045 ORTHO05D000611 7.2e-15 84.3 62 67.7
Phvul.008G138000 Phaseolus vulgaris HOM05D000045 ORTHO05D000611 7.2e-15 84.3 70 58.6
TWI18G0572 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 7.2e-15 84.3 72 59.7
Prupe.8G188400 Prunus persica HOM05D000045 ORTHO05D000611 9.4e-15 84.0 72 59.7
Glyma.18G154100 Glycine max HOM05D000045 ORTHO05D000611 1.2e-14 83.6 70 57.1
Lj1g0012232 Lotus japonicus HOM05D000045 ORTHO05D000611 1.6e-14 83.2 72 56.9
TWI75G1249 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.6e-14 83.2 72 58.3
Cpa.g.sc8.54 Carica papaya HOM05D000045 ORTHO05D000611 2.7e-14 82.4 70 58.6
Cc01_g15970 Coffea canephora HOM05D000045 ORTHO05D000611 2.7e-14 82.4 72 56.9
MD05G1156300 Malus domestica HOM05D000045 ORTHO05D000611 2.7e-14 82.4 72 59.7
Thecc.01G209200 Theobroma cacao HOM05D000045 ORTHO05D000611 4.6e-14 81.6 72 55.6
VMungo1383G0949 Vigna mungo HOM05D000045 ORTHO05D000611 6.1e-14 81.3 70 57.1
CANSAT01G1376 Cannabis sativa HOM05D000045 ORTHO05D000611 7.9e-14 80.9 72 55.6
Duzib138G1407 Durio zibethinus HOM05D000045 ORTHO05D000611 7.9e-14 80.9 72 56.9
Gorai.001G227800 Gossypium raimondii HOM05D000045 ORTHO05D000611 1.0e-13 80.5 72 54.2
FvH4_2g17602 Fragaria vesca HOM05D000045 ORTHO05D000611 1.4e-13 80.1 72 56.9
Gohir.D07G202400 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.4e-13 80.1 72 52.8
CiPaw.13G057800 Carya illinoinensis HOM05D000045 ORTHO05D000611 1.8e-13 79.7 64 64.1
Gohir.A07G196000 Gossypium hirsutum HOM05D000045 ORTHO05D000611 2.3e-13 79.3 72 52.8
RcHm_v2.0_Chr6g0282571 Rosa chinensis HOM05D000045 ORTHO05D000611 3.9e-13 78.6 72 55.6
Psat3g151960 Pisum sativum HOM05D000045 ORTHO05D000611 5.1e-13 78.2 69 52.2
Potri.014G176600 Populus trichocarpa HOM05D000045 ORTHO05D000611 5.1e-13 78.2 72 54.2
Haze_03581 Corylus avellana HOM05D000045 ORTHO05D000611 1.5e-12 76.6 63 60.3
ClCG09G007820 Citrullus lanatus HOM05D000045 ORTHO05D000611 1.9e-12 76.3 72 52.8
CsaV3_7G027310 Cucumis sativus L. HOM05D000045 ORTHO05D000611 2.5e-12 75.9 72 52.8
THA.LOC104826647 Tarenaya hassleriana HOM05D000045 ORTHO05D000611 4.3e-12 75.1 76 46.1
Migut.N00673 Erythranthe guttata HOM05D000045 ORTHO05D000611 9.7e-12 73.9 71 52.1
Sed0014099 Sechium edule HOM05D000045 ORTHO05D000611 1.7e-11 73.2 72 51.4
SGA_v2.0_scaffold77G25306 Striga asiatica HOM05D000045 ORTHO05D000611 2.2e-11 72.8 71 54.9
Lalb_Chr19g0126221 Lupinus albus HOM05D000045 ORTHO05D000611 2.8e-11 72.4 72 51.4
Rhsim13G0054000 Rhododendron simsii HOM05D000045 ORTHO05D000611 2.8e-11 72.4 59 62.7
vmacro02829 Vaccinium macrocarpon HOM05D000045 ORTHO05D000611 3.7e-11 72.0 59 61.0
Sabra02G0182300 Salix brachista HOM05D000045 ORTHO05D000611 1.1e-10 70.5 61 54.1
Nn1g09619 Nelumbo nucifera HOM05D000045 ORTHO05D000611 1.4e-10 70.1 63 57.1
MELO3C029191.2 Cucumis melo HOM05D000045 ORTHO05D000611 2.4e-10 69.3 61 55.7
MSTRG.17964 Avicennia marina HOM05D000045 ORTHO05D000611 3.1e-10 68.9 71 47.9
Ca_07435_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000611 3.1e-10 68.9 60 55.0
Aqoxy2G04142 Aquilegia oxysepala HOM05D000045 ORTHO05D000611 5.3e-10 68.2 70 48.6
TAR365G0928 Trochodendron aralioides HOM05D000045 ORTHO05D000611 9.1e-10 67.4 65 49.2
PGR083G2814 Punica granatum HOM05D000045 ORTHO05D000611 1.5e-09 66.6 74 45.9
COL.COLO4_07676 Corchorus olitorius HOM05D000045 ORTHO05D000611 3.4e-09 65.5 69 46.4
Dinv35451 Davidia involucrata HOM05D000045 ORTHO05D000611 3.4e-09 65.5 59 57.6
PGR083G0403 Punica granatum HOM05D000045 ORTHO05D000611 4.5e-09 65.1 70 44.3
PSO732G0561 Papaver somniferum HOM05D000045 ORTHO05D000611 5.9e-09 64.7 115 34.8
Sp7g09580 Schrenkiella parvula HOM05D000045 ORTHO05D000611 5.9e-09 64.7 69 44.9
Dinv28801 Davidia involucrata HOM05D000045 ORTHO05D000611 7.7e-09 64.3 73 49.3
Thecc.04G178600 Theobroma cacao HOM05D000045 ORTHO05D000611 1.3e-08 63.5 69 44.9
Gohir.A03G123700 Gossypium hirsutum HOM05D000045 ORTHO05D000611 2.2e-08 62.8 69 44.9
Gohir.D02G114101 Gossypium hirsutum HOM05D000045 ORTHO05D000611 2.2e-08 62.8 69 44.9
Oeu049582.1 Olea europaea HOM05D000045 ORTHO05D000611 2.2e-08 62.8 59 57.6
Atru.chr4.1222 Acer truncatum HOM05D000045 ORTHO05D000611 2.9e-08 62.4 69 43.5
Eucgr.A00281 Eucalyptus grandis HOM05D000045 ORTHO05D000611 2.9e-08 62.4 68 45.6
QL10p049133 Quercus lobata HOM05D000045 ORTHO05D000611 2.9e-08 62.4 75 41.3
PGSC0003DMG400010984 Solanum tuberosum HOM05D000045 ORTHO05D000611 2.9e-08 62.4 59 54.2
Cc01_g15980 Coffea canephora HOM05D000045 ORTHO05D000611 3.8e-08 62.0 59 55.9
PGR142G2342 Punica granatum HOM05D000045 ORTHO05D000611 3.8e-08 62.0 72 45.8
TWI63G0798 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 3.8e-08 62.0 77 40.3
AL9U11660 Arabidopsis lyrata HOM05D000045 ORTHO05D000611 5.0e-08 61.6 74 37.8
CANSAT78G0325 Cannabis sativa HOM05D000045 ORTHO05D000611 5.0e-08 61.6 66 47.0
CiPaw.02G054500 Carya illinoinensis HOM05D000045 ORTHO05D000611 5.0e-08 61.6 75 41.3
AT4G12850 Arabidopsis thaliana HOM05D000045 ORTHO05D000611 6.5e-08 61.2 116 30.2
GSVIVG01001897001 Vitis vinifera HOM05D000045 ORTHO05D000611 6.5e-08 61.2 72 45.8
Sopen09g021650 Solanum pennellii HOM05D000045 ORTHO05D000611 8.5e-08 60.8 59 54.2
THA.LOC104799872 Tarenaya hassleriana HOM05D000045 ORTHO05D000611 8.5e-08 60.8 60 43.3
Carub.0004s2575 Capsella rubella HOM05D000045 ORTHO05D000611 1.1e-07 60.5 68 44.1
CiPaw.13G057900 Carya illinoinensis HOM05D000045 ORTHO05D000611 1.1e-07 60.5 59 49.2
Duzib212G0630 Durio zibethinus HOM05D000045 ORTHO05D000611 1.1e-07 60.5 69 43.5
Prupe.1G196000 Prunus persica HOM05D000045 ORTHO05D000611 1.4e-07 60.1 69 43.5
Solyc09g057880.3 Solanum lycopersicum HOM05D000045 ORTHO05D000611 1.4e-07 60.1 59 52.5
ClCG10G017250 Citrullus lanatus HOM05D000045 ORTHO05D000611 1.9e-07 59.7 69 42.0
Haze_01486 Corylus avellana HOM05D000045 ORTHO05D000611 1.9e-07 59.7 56 50.0
Lalb_Chr15g0080041 Lupinus albus HOM05D000045 ORTHO05D000611 1.9e-07 59.7 69 43.5
TWI36G1528 Tripterygium wilfordii HOM05D000045 ORTHO05D000611 1.9e-07 59.7 59 50.8
CSS0014349 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000611 2.5e-07 59.3 69 50.7
Manes.04G043400 Manihot esculenta HOM05D000045 ORTHO05D000611 2.5e-07 59.3 75 40.0
Phvul.005G002900 Phaseolus vulgaris HOM05D000045 ORTHO05D000611 2.5e-07 59.3 69 43.5
CANSAT01G2047 Cannabis sativa HOM05D000045 ORTHO05D000611 3.2e-07 58.9 55 56.4
Manes.11G121700 Manihot esculenta HOM05D000045 ORTHO05D000611 3.2e-07 58.9 69 39.1
Prupe.8G188500 Prunus persica HOM05D000045 ORTHO05D000611 3.2e-07 58.9 71 43.7
Sabra17G0017900 Salix brachista HOM05D000045 ORTHO05D000611 4.2e-07 58.5 72 38.9
Atru.chr3.4237 Acer truncatum HOM05D000045 ORTHO05D000611 5.5e-07 58.2 57 47.4
arahy.Tifrunner.gnm1.ann1.SVU2WY Arachis hypogaea HOM05D000045 ORTHO05D000611 5.5e-07 58.2 66 45.5
CARHR138370 Cardamine hirsuta HOM05D000045 ORTHO05D000611 5.5e-07 58.2 68 41.2
RcHm_v2.0_Chr4g0406491 Rosa chinensis HOM05D000045 ORTHO05D000611 5.5e-07 58.2 71 43.7
TPR.G33740 Trifolium pratense HOM05D000045 ORTHO05D000611 5.5e-07 58.2 46 58.7
VMungo1080G1100 Vigna mungo HOM05D000045 ORTHO05D000611 5.5e-07 58.2 69 43.5
CsaV3_3G039150 Cucumis sativus L. HOM05D000045 ORTHO05D000611 7.2e-07 57.8 78 43.6
Eucgr.A00087 Eucalyptus grandis HOM05D000045 ORTHO05D000611 7.2e-07 57.8 68 42.6
FvH4_4g10892 Fragaria vesca HOM05D000045 ORTHO05D000611 7.2e-07 57.8 70 44.3
Gohir.A07G158800 Gossypium hirsutum HOM05D000045 ORTHO05D000611 7.2e-07 57.8 69 44.9
Lj3g0020528 Lotus japonicus HOM05D000045 ORTHO05D000611 7.2e-07 57.8 68 41.2
MD10G1150000 Malus domestica HOM05D000045 ORTHO05D000611 7.2e-07 57.8 59 45.8
PSO017G3764 Papaver somniferum HOM05D000045 ORTHO05D000611 7.2e-07 57.8 69 42.0
Aa31LG1G25140 Aethionema arabicum HOM05D000045 ORTHO05D000611 9.4e-07 57.4 69 37.7
Cpa.g.sc8.53 Carica papaya HOM05D000045 ORTHO05D000611 9.4e-07 57.4 61 47.5
Duzib268G0501 Durio zibethinus HOM05D000045 ORTHO05D000611 9.4e-07 57.4 81 38.3
Glyma.06G323400 Glycine max HOM05D000045 ORTHO05D000611 9.4e-07 57.4 69 42.0
Potri.017G029400 Populus trichocarpa HOM05D000045 ORTHO05D000611 9.4e-07 57.4 72 37.5
Sed0011457 Sechium edule HOM05D000045 ORTHO05D000611 9.4e-07 57.4 75 40.0
arahy.Tifrunner.gnm1.ann1.4T21GN Arachis hypogaea HOM05D000045 ORTHO05D000611 1.2e-06 57.0 66 43.9
Gorai.N002500 Gossypium raimondii HOM05D000045 ORTHO05D000611 1.2e-06 57.0 69 44.9
Manes.14G011501 Manihot esculenta HOM05D000045 ORTHO05D000611 1.2e-06 57.0 57 45.6
Nitab4.5_0005686g0060 Nicotiana tabacum HOM05D000045 ORTHO05D000611 1.2e-06 57.0 59 50.8
AL4G41960 Arabidopsis lyrata HOM05D000045 ORTHO05D000611 1.6e-06 56.6 68 39.7
AT2G43280 Arabidopsis thaliana HOM05D000045 ORTHO05D000611 1.6e-06 56.6 68 39.7
BcaC02g07193 Brassica carinata HOM05D000045 ORTHO05D000611 1.6e-06 56.6 68 39.7
C04p70310 Brassica napus HOM05D000045 ORTHO05D000611 1.6e-06 56.6 68 39.7
BolC4t28534H Brassica oleracea HOM05D000045 ORTHO05D000611 1.6e-06 56.6 68 39.7
Ca_20964_v3 Cicer arietinum L. HOM05D000045 ORTHO05D000611 1.6e-06 56.6 78 35.9
Dinv22738 Davidia involucrata HOM05D000045 ORTHO05D000611 1.6e-06 56.6 56 48.2
Glyma.04G111200 Glycine max HOM05D000045 ORTHO05D000611 1.6e-06 56.6 69 42.0
Gohir.D07G167600 Gossypium hirsutum HOM05D000045 ORTHO05D000611 1.6e-06 56.6 69 44.9
ClCG09G008120 Citrullus lanatus HOM05D000045 ORTHO05D000611 2.1e-06 56.2 59 49.2
BcaB06g29298 Brassica carinata HOM05D000045 ORTHO05D000611 2.7e-06 55.8 65 43.1
CiPaw.13G058000 Carya illinoinensis HOM05D000045 ORTHO05D000611 2.7e-06 55.8 64 48.4
Psat6g044320 Pisum sativum HOM05D000045 ORTHO05D000611 2.7e-06 55.8 72 36.1
Thecc.01G209300 Theobroma cacao HOM05D000045 ORTHO05D000611 2.7e-06 55.8 67 43.3
GSVIVG01010761001 Vitis vinifera HOM05D000045 ORTHO05D000611 2.7e-06 55.8 63 47.6
Atru.chr6.3531 Acer truncatum HOM05D000045 ORTHO05D000611 3.6e-06 55.5 64 46.9
Manes.12G059800 Manihot esculenta HOM05D000045 ORTHO05D000611 3.6e-06 55.5 69 46.4
A04p32610 Brassica napus HOM05D000045 ORTHO05D000611 4.7e-06 55.1 68 38.2
BraA04t18725Z Brassica rapa HOM05D000045 ORTHO05D000611 4.7e-06 55.1 68 38.2
Thhalv10001648m.g Eutrema salsugineum HOM05D000045 ORTHO05D000611 4.7e-06 55.1 68 38.2
THA.LOC104803735 Tarenaya hassleriana HOM05D000045 ORTHO05D000611 4.7e-06 55.1 57 47.4
Prupe.8G188600 Prunus persica HOM05D000045 ORTHO05D000611 6.1e-06 54.7 69 43.5
QL10p049180 Quercus lobata HOM05D000045 ORTHO05D000611 6.1e-06 54.7 72 40.3
TAR636G1785 Trochodendron aralioides HOM05D000045 ORTHO05D000611 6.1e-06 54.7 70 45.7
FvH4_2g17603 Fragaria vesca HOM05D000045 ORTHO05D000611 7.9e-06 54.3 62 45.2
Gohir.A10G138200 Gossypium hirsutum HOM05D000045 ORTHO05D000611 7.9e-06 54.3 64 42.2


User provided reference genes

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