Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia10265 Actinidia chinensis HOM05D000678 ORTHO05D030926 5.5e-113 411.0 208 100.0
Rhsim06G0069400 Rhododendron simsii HOM05D000678 ORTHO05D030926 1.2e-27 127.5 184 45.7
Solyc04g076820.1 Solanum lycopersicum HOM05D000678 ORTHO05D002523 2.5e-25 119.8 167 44.3
TWI12G0645 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 4.3e-25 119.0 161 45.3
PGSC0003DMG400006383 Solanum tuberosum HOM05D000678 ORTHO05D002523 4.7e-24 115.5 142 47.9
Nitab4.5_0003464g0020 Nicotiana tabacum HOM05D000678 ORTHO05D002523 1.1e-23 114.4 152 47.4
Nitab4.5_0001558g0070 Nicotiana tabacum HOM05D000678 ORTHO05D002523 1.8e-23 113.6 159 46.5
TWI56G0996 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 3.1e-23 112.8 149 48.3
TAR628G1260 Trochodendron aralioides HOM05D000678 ORTHO05D002523 2.0e-22 110.2 164 45.7
Hma1.2p1_0010F.1_g006370 Hydrangea macrophylla HOM05D000678 ORTHO05D002523 5.4e-20 102.1 141 48.2
Lj4A742T40 Lonicera japonica HOM05D000678 ORTHO05D002523 1.6e-19 100.5 177 42.4
CiPaw.07G161700 Carya illinoinensis HOM05D000678 ORTHO05D002523 2.1e-19 100.1 181 42.0
Sopen04g030530 Solanum pennellii HOM05D000678 ORTHO05D002523 4.6e-19 99.0 131 45.0
TAR376G0926 Trochodendron aralioides HOM05D000678 ORTHO05D002523 4.6e-19 99.0 148 44.6
vmacro21365 Vaccinium macrocarpon HOM05D000678 ORTHO05D002523 4.6e-19 99.0 151 44.4
MBI16_g26238_MAGBIO Magnolia biondii HOM05D000678 ORTHO05D002523 1.0e-18 97.8 146 43.2
Cc10_g08240 Coffea canephora HOM05D000678 ORTHO05D002523 1.7e-18 97.1 159 43.4
Dinv22012 Davidia involucrata HOM05D000678 ORTHO05D030926 1.5e-17 94.0 105 48.6
RcHm_v2.0_Chr7g0233221 Rosa chinensis HOM05D000678 ORTHO05D002523 3.3e-17 92.8 166 39.8
ECA246G4963 Erigeron canadensis HOM05D000678 ORTHO05D002523 5.6e-17 92.0 153 41.2
MD15G1392800 Malus domestica HOM05D000678 ORTHO05D002523 1.1e-15 87.8 142 43.7
Peaxi162Scf00674g00022 Petunia axillaris HOM05D000678 ORTHO05D002523 3.1e-15 86.3 154 37.7
Dinv16036 Davidia involucrata HOM05D000678 ORTHO05D002523 9.0e-15 84.7 169 34.9
Lsat_1_v5_gn_6_107080 Lactuca sativa HOM05D000678 ORTHO05D002523 1.5e-14 84.0 172 36.6
Haze_22503 Corylus avellana HOM05D000678 ORTHO05D002523 9.9e-14 81.3 166 42.2
Dinv08964 Davidia involucrata HOM05D000678 ORTHO05D002523 9.9e-14 81.3 171 35.1
Cfa013830 Carpinus fangiana HOM05D000678 ORTHO05D002523 1.7e-13 80.5 138 42.0
Nn1g05682 Nelumbo nucifera HOM05D000678 ORTHO05D002523 1.7e-13 80.5 157 40.8
FAN18G1272 Fragaria x ananassa HOM05D000678 ORTHO05D002523 2.2e-13 80.1 166 39.8
Prupe.1G540000 Prunus persica HOM05D000678 ORTHO05D002523 2.2e-13 80.1 180 36.7
FvH4_5g33880 Fragaria vesca HOM05D000678 ORTHO05D002523 2.9e-13 79.7 161 40.4
FAN08G2739 Fragaria x ananassa HOM05D000678 ORTHO05D002523 2.9e-13 79.7 161 40.4
Atru.chr13.943 Acer truncatum HOM05D000678 ORTHO05D002523 1.4e-12 77.4 176 35.8
Aqoxy6G00632 Aquilegia oxysepala HOM05D000678 ORTHO05D002523 1.4e-12 77.4 135 40.0
FAN04G2980 Fragaria x ananassa HOM05D000678 ORTHO05D002523 1.9e-12 77.0 197 35.5
CSS0030925 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 3.2e-12 76.3 141 38.3
CSS0047072 Camellia sinensis var. sinensis HOM05D000678 ORTHO05D002523 5.4e-12 75.5 141 38.3
Thecc.08G076400 Theobroma cacao HOM05D000678 ORTHO05D002523 5.4e-12 75.5 158 39.9
Actinidia02413 Actinidia chinensis HOM05D000678 ORTHO05D002523 1.2e-11 74.3 151 35.8
Oeu014207.1 Olea europaea HOM05D000678 ORTHO05D002523 2.1e-11 73.6 147 34.0
PGR031G1720 Punica granatum HOM05D000678 ORTHO05D002523 1.8e-10 70.5 162 35.8
Duzib132G0018 Durio zibethinus HOM05D000678 ORTHO05D002523 2.3e-10 70.1 164 34.8
Lj9C342G6 Lonicera japonica HOM05D000678 ORTHO05D002523 2.3e-10 70.1 140 36.4
Glyma.13G254300 Glycine max HOM05D000678 ORTHO05D002523 3.0e-10 69.7 159 33.3
Gohir.D05G219800 Gossypium hirsutum HOM05D000678 ORTHO05D002523 3.9e-10 69.3 127 40.9
MD05G1050100 Malus domestica HOM05D000678 ORTHO05D002523 5.1e-10 68.9 167 35.9
MELO3C018562.2 Cucumis melo HOM05D000678 ORTHO05D002523 6.7e-10 68.6 185 33.0
Duzib041G0367 Durio zibethinus HOM05D000678 ORTHO05D002523 1.1e-09 67.8 125 40.0
MD10G1057400 Malus domestica HOM05D000678 ORTHO05D002523 1.1e-09 67.8 149 35.6
Oeu025231.1 Olea europaea HOM05D000678 ORTHO05D002523 1.5e-09 67.4 130 33.1
Thecc.02G124700 Theobroma cacao HOM05D000678 ORTHO05D002523 1.5e-09 67.4 118 40.7
Cfa004801 Carpinus fangiana HOM05D000678 ORTHO05D002523 1.9e-09 67.0 182 31.9
Gorai.009G226800 Gossypium raimondii HOM05D000678 ORTHO05D002523 3.3e-09 66.2 127 40.2
TWI59G0244 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 4.3e-09 65.9 174 33.3
Psat1g212680 Pisum sativum HOM05D000678 ORTHO05D002523 5.6e-09 65.5 148 34.5
TWI23G0011 Tripterygium wilfordii HOM05D000678 ORTHO05D002523 7.4e-09 65.1 156 32.7
Lj5P225T19 Lonicera japonica HOM05D000678 ORTHO05D002523 1.3e-08 64.3 145 37.9
Glyma.15G060600 Glycine max HOM05D000678 ORTHO05D002523 3.7e-08 62.8 143 35.0
Eucgr.I02580 Eucalyptus grandis HOM05D000678 ORTHO05D002523 6.2e-08 62.0 214 28.0
SGA_v2.0_scaffold342G49391 Striga asiatica HOM05D000678 ORTHO05D002523 6.2e-08 62.0 157 34.4
MD08G1208700 Malus domestica HOM05D000678 ORTHO05D002523 1.1e-07 61.2 218 28.9
Aqoxy5G02099 Aquilegia oxysepala HOM05D000678 ORTHO05D002523 1.4e-07 60.8 130 36.9
Nitab4.5_0011266g0020 Nicotiana tabacum HOM05D000678 ORTHO05D002523 1.8e-07 60.5 139 35.3
Gohir.A03G179000 Gossypium hirsutum HOM05D000678 ORTHO05D002523 2.4e-07 60.1 144 35.4
CAN.G504.49 Capsicum annuum HOM05D000678 ORTHO05D002523 3.1e-07 59.7 138 34.8
Sed0002041 Sechium edule HOM05D000678 ORTHO05D002523 3.1e-07 59.7 185 32.4
CANSAT54G2740 Cannabis sativa HOM05D000678 ORTHO05D002523 5.3e-07 58.9 163 30.7
Haze_10393 Corylus avellana HOM05D000678 ORTHO05D002523 5.3e-07 58.9 192 29.2
Lsat_1_v5_gn_7_82961 Lactuca sativa HOM05D000678 ORTHO05D002523 5.3e-07 58.9 135 34.1
Gohir.A05G217700 Gossypium hirsutum HOM05D000678 ORTHO05D002523 6.9e-07 58.5 127 37.0
AUR62027078 Chenopodium quinoa HOM05D000678 ORTHO05D002523 1.2e-06 57.8 130 36.2
Ca_00184_v3 Cicer arietinum L. HOM05D000678 ORTHO05D002523 3.4e-06 56.2 152 34.2
HanXRQChr05g0150431 Helianthus annuus HOM05D000678 ORTHO05D002523 4.5e-06 55.8 145 29.7
MELO3C011109.2 Cucumis melo HOM05D000678 ORTHO05D002523 5.8e-06 55.5 152 34.2
DCAR_029281 Daucus carota HOM05D000678 ORTHO05D002523 5.8e-06 55.5 157 34.4
VMungo0540G2052 Vigna mungo HOM05D000678 ORTHO05D002523 5.8e-06 55.5 158 31.0


User provided reference genes

Program Settings