Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.8e-105 384.0 197 100.0
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.3e-66 256.9 191 75.9
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 6.9e-33 144.8 206 48.1
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.0e-31 141.0 202 50.0
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.1e-27 127.5 198 42.9
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.6e-24 116.3 185 46.5
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 2.6e-24 116.3 199 40.2
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 8.5e-23 111.3 196 42.3
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.4e-22 110.5 202 40.6
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.2e-21 107.5 190 43.2
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.7e-21 106.3 187 42.2
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 4.7e-21 105.5 212 42.0
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 1.0e-20 104.4 204 40.2
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.8e-20 103.6 195 41.5
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 3.9e-20 102.4 185 41.1
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 4.4e-19 99.0 195 39.5
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 5.7e-19 98.6 188 39.4
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 7.4e-19 98.2 188 41.0
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.3e-18 97.4 187 40.6
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.7e-18 97.1 189 41.8
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 2.2e-18 96.7 201 36.3
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.8e-18 96.3 186 39.2
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 4.8e-18 95.5 196 40.3
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 2.4e-17 93.2 192 39.1
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 3.1e-17 92.8 201 35.8
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 7.0e-17 91.7 189 39.7
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 1.5e-16 90.5 195 39.0
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 2.0e-16 90.1 189 38.6
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 2.6e-16 89.7 214 40.2
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 3.5e-16 89.4 197 38.6
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 4.5e-16 89.0 188 39.9
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 7.7e-16 88.2 202 39.6
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 5.0e-15 85.5 207 35.3
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 6.5e-15 85.1 195 37.9
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 8.5e-15 84.7 194 38.1
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 8.5e-15 84.7 194 38.1
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 8.5e-15 84.7 205 37.1
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.9e-14 83.6 193 37.3
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 1.9e-14 83.6 88 55.7
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 3.2e-14 82.8 194 37.6
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 4.2e-14 82.4 171 40.4
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 7.2e-14 81.6 205 37.1
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 1.6e-13 80.5 195 35.4
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 4.7e-13 79.0 208 37.0
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 1.8e-12 77.0 200 37.5
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 2.3e-12 76.6 193 36.3
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 3.0e-12 76.3 231 33.8
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.9e-12 75.9 193 35.8
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 3.9e-12 75.9 198 36.4
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 1.1e-11 74.3 204 36.3
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 4.4e-11 72.4 207 30.0
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 5.7e-11 72.0 114 40.4
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 1.3e-10 70.9 190 33.2
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 1.3e-10 70.9 206 32.0
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 3.7e-10 69.3 186 32.8
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 6.3e-10 68.6 190 33.2
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 1.1e-09 67.8 192 32.8
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 1.8e-09 67.0 185 34.6
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 3.1e-09 66.2 192 29.2
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 3.1e-09 66.2 206 29.1
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 5.3e-09 65.5 198 32.3
Nn1g02762 Nelumbo nucifera HOM05D007526 ORTHO05D009350 9.1e-09 64.7 217 30.4
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.6e-08 63.9 179 34.6
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 2.0e-08 63.5 195 31.3
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 2.0e-08 63.5 196 34.2
Eucgr.H03043 Eucalyptus grandis HOM05D007526 ORTHO05D009350 4.5e-08 62.4 202 27.7
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 7.7e-08 61.6 213 28.2
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 7.7e-08 61.6 194 29.9
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.3e-07 60.8 188 28.7
QL06p017957 Quercus lobata HOM05D007526 ORTHO05D009350 1.7e-07 60.5 181 29.3
Gorai.006G253500 Gossypium raimondii HOM05D007526 ORTHO05D009350 2.9e-07 59.7 211 30.8
Glyma.20G209500 Glycine max HOM05D007526 ORTHO05D009350 3.8e-07 59.3 187 31.0
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 5.0e-07 58.9 200 26.5
Duzib212G0007 Durio zibethinus HOM05D007526 ORTHO05D009350 5.0e-07 58.9 208 29.8
Glyma.10G181000 Glycine max HOM05D007526 ORTHO05D009350 8.5e-07 58.2 184 30.4
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.1e-06 57.8 210 28.6
Gohir.A09G229800 Gossypium hirsutum HOM05D007526 ORTHO05D009350 1.5e-06 57.4 211 30.3
Cpa.g.sc44.57 Carica papaya HOM05D007526 ORTHO05D009350 4.2e-06 55.8 193 25.9
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 5.5e-06 55.5 193 25.9
Phvul.007G108400 Phaseolus vulgaris HOM05D007526 ORTHO05D009350 7.2e-06 55.1 185 29.2


User provided reference genes

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