Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia09488 Actinidia chinensis HOM05D006066 ORTHO05D007720 2.6e-155 552.0 272 100.0
Actinidia23727 Actinidia chinensis HOM05D006066 ORTHO05D007720 8.4e-122 440.7 264 84.8
CSS0038727 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 9.4e-97 357.5 267 68.2
Rhsim01G0256300 Rhododendron simsii HOM05D006066 ORTHO05D007720 3.3e-94 349.0 277 67.1
vmacro14760 Vaccinium macrocarpon HOM05D006066 ORTHO05D007720 5.7e-94 348.2 274 66.1
CSS0045030 Camellia sinensis var. sinensis HOM05D006066 ORTHO05D007720 1.8e-84 316.6 218 70.6
Nn1g07817 Nelumbo nucifera HOM05D006066 ORTHO05D007720 1.2e-59 234.2 274 47.8
MD10G1165500 Malus domestica HOM05D006066 ORTHO05D007720 3.5e-59 232.6 268 46.3
DCAR_018556 Daucus carota HOM05D006066 ORTHO05D007720 8.0e-56 221.5 206 52.4
Sc24g0003620 Simmondsia chinensis HOM05D006066 ORTHO05D007720 9.8e-54 214.5 268 45.9
FAN15G1679 Fragaria x ananassa HOM05D006066 ORTHO05D007720 2.2e-53 213.4 268 45.1
Manes.11G092400 Manihot esculenta HOM05D006066 ORTHO05D007720 1.1e-52 211.1 281 40.9
TWI36G0510 Tripterygium wilfordii HOM05D006066 ORTHO05D007720 1.1e-52 211.1 272 43.4
Lj2A644T10 Lonicera japonica HOM05D006066 ORTHO05D007720 5.4e-52 208.8 177 55.4
RcHm_v2.0_Chr6g0284991 Rosa chinensis HOM05D006066 ORTHO05D007720 5.4e-52 208.8 267 43.8
FvH4_2g19201 Fragaria vesca HOM05D006066 ORTHO05D007720 7.0e-52 208.4 269 44.6
Duzib133G0184 Durio zibethinus HOM05D006066 ORTHO05D007720 2.7e-51 206.5 269 42.4
Gohir.D11G143350 Gossypium hirsutum HOM05D006066 ORTHO05D007720 4.6e-51 205.7 269 40.5
Prupe.8G204000 Prunus persica HOM05D006066 ORTHO05D007720 7.8e-51 204.9 208 48.1
Thecc.01G227100 Theobroma cacao HOM05D006066 ORTHO05D007720 3.0e-50 203.0 269 39.4
Peaxi162Scf00107g01622 Petunia axillaris HOM05D006066 ORTHO05D007720 5.0e-50 202.2 273 42.9
TAR393G0002 Trochodendron aralioides HOM05D006066 ORTHO05D007720 1.9e-49 200.3 178 55.1
Aqoxy2G03103 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 2.5e-49 199.9 209 48.3
FAN24G1416 Fragaria x ananassa HOM05D006066 ORTHO05D000168 3.3e-49 199.5 285 41.4
FAN27G1043 Fragaria x ananassa HOM05D006066 ORTHO05D007720 4.3e-49 199.1 286 40.9
EL10Ac7g17774 Beta vulgaris HOM05D006066 ORTHO05D007720 7.3e-49 198.4 268 42.2
Atru.chr11.2652 Acer truncatum HOM05D006066 ORTHO05D007720 9.5e-49 198.0 266 41.0
Lsat_1_v5_gn_8_90041 Lactuca sativa HOM05D006066 ORTHO05D007720 1.2e-48 197.6 209 46.9
Gohir.A11G137000 Gossypium hirsutum HOM05D006066 ORTHO05D007720 1.6e-48 197.2 208 43.8
Sopen09g024200 Solanum pennellii HOM05D006066 ORTHO05D007720 1.4e-47 194.1 275 42.2
CiPaw.01G110500 Carya illinoinensis HOM05D006066 ORTHO05D007720 2.3e-47 193.4 206 44.2
Solyc09g061380.3 Solanum lycopersicum HOM05D006066 ORTHO05D007720 1.2e-46 191.0 275 41.5
Migut.D00528 Erythranthe guttata HOM05D006066 ORTHO05D007720 4.4e-46 189.1 269 37.9
Cfa008679 Carpinus fangiana HOM05D006066 ORTHO05D007720 1.7e-45 187.2 238 40.8
Hund18348 Selenicereus undatus HOM05D006066 ORTHO05D007720 2.2e-45 186.8 267 40.8
AUR62031844 Chenopodium quinoa HOM05D006066 ORTHO05D007720 2.7e-43 179.9 267 38.6
HanXRQChr04g0110731 Helianthus annuus HOM05D006066 ORTHO05D007720 3.0e-42 176.4 209 42.6
CANSAT01G1110 Cannabis sativa HOM05D006066 ORTHO05D007720 5.1e-42 175.6 268 37.7
AUR62008867 Chenopodium quinoa HOM05D006066 ORTHO05D007720 5.1e-42 175.6 265 37.4
MELO3C026986.2 Cucumis melo HOM05D006066 ORTHO05D007720 6.6e-42 175.3 270 39.3
Hma1.2p1_1061F.1_g253440 Hydrangea macrophylla HOM05D006066 ORTHO05D007720 8.6e-42 174.9 135 62.2
Gorai.007G153600 Gossypium raimondii HOM05D006066 ORTHO05D007720 1.1e-41 174.5 178 43.3
ClCG07G001890 Citrullus lanatus HOM05D006066 ORTHO05D007720 3.3e-41 172.9 269 37.5
CAN.G154.6 Capsicum annuum HOM05D006066 ORTHO05D007720 1.6e-40 170.6 270 38.5
ECA236G0120 Erigeron canadensis HOM05D006066 ORTHO05D007720 2.8e-40 169.9 212 42.5
MSTRG.21425 Avicennia marina HOM05D006066 ORTHO05D007720 2.3e-39 166.8 207 38.2
Nitab4.5_0000045g0020 Nicotiana tabacum HOM05D006066 ORTHO05D007720 5.2e-39 165.6 273 38.5
PSO782G0283 Papaver somniferum HOM05D006066 ORTHO05D007720 7.6e-38 161.8 274 37.2
SalBow6G7080 Salvia bowleyana HOM05D006066 ORTHO05D007720 1.7e-37 160.6 272 37.1
ATR0736G144 Amborella trichopoda HOM05D006066 ORTHO05D007720 4.9e-37 159.1 205 41.5
SGA_v2.0_scaffold8G04647 Striga asiatica HOM05D006066 ORTHO05D007720 1.4e-36 157.5 273 35.9
PGR119G0212 Punica granatum HOM05D006066 ORTHO05D007720 1.9e-36 157.1 265 35.1
Eucgr.K03610 Eucalyptus grandis HOM05D006066 ORTHO05D007720 2.4e-36 156.8 270 35.2
Psat2g159600 Pisum sativum HOM05D006066 ORTHO05D007720 2.4e-36 156.8 272 36.4
Lj3g0025737 Lotus japonicus HOM05D006066 ORTHO05D007720 5.4e-36 155.6 269 35.7
PSO170G1150 Papaver somniferum HOM05D006066 ORTHO05D007720 6.0e-35 152.1 210 41.4
COL.COLO4_07189 Corchorus olitorius HOM05D006066 ORTHO05D007720 7.8e-35 151.8 208 38.0
CsaV3_3G029870 Cucumis sativus L. HOM05D006066 ORTHO05D007720 7.8e-35 151.8 208 40.4
SGA_v2.0_scaffold586G53055 Striga asiatica HOM05D006066 ORTHO05D007720 1.9e-33 147.1 261 36.4
AL3G18290 Arabidopsis lyrata HOM05D006066 ORTHO05D007720 1.6e-32 144.1 211 37.4
Glyma.19G124200 Glycine max HOM05D006066 ORTHO05D007720 1.4e-31 141.0 270 32.2
Medtr4g022660 Medicago truncatula HOM05D006066 ORTHO05D007720 2.4e-31 140.2 271 33.2
Carub.0003s0657 Capsella rubella HOM05D006066 ORTHO05D007720 3.1e-31 139.8 191 36.6
Sed0017682 Sechium edule HOM05D006066 ORTHO05D007720 3.1e-31 139.8 209 40.2
AT3G07060 Arabidopsis thaliana HOM05D006066 ORTHO05D007720 5.2e-31 139.0 192 38.5
C05p60330 Brassica napus HOM05D006066 ORTHO05D007720 6.9e-31 138.7 210 34.8
BraA05t22840Z Brassica rapa HOM05D006066 ORTHO05D000168 8.9e-31 138.3 210 34.8
BcaC05g29758 Brassica carinata HOM05D006066 ORTHO05D007720 1.5e-30 137.5 192 35.4
A05p41140 Brassica napus HOM05D006066 ORTHO05D007720 2.0e-30 137.1 210 34.8
Aqoxy5G00070 Aquilegia oxysepala HOM05D006066 ORTHO05D007720 3.4e-30 136.3 144 47.2
BolC5t34680H Brassica oleracea HOM05D006066 ORTHO05D007720 4.4e-30 136.0 211 35.1
BcaC05g29836 Brassica carinata HOM05D006066 ORTHO05D000168 5.8e-30 135.6 211 35.1
THA.LOC104818950 Tarenaya hassleriana HOM05D006066 ORTHO05D007720 7.6e-30 135.2 277 31.4
Thhalv10020116m.g Eutrema salsugineum HOM05D006066 ORTHO05D007720 4.9e-29 132.5 210 34.3
Aa31LG5G17620 Aethionema arabicum HOM05D006066 ORTHO05D007720 6.4e-29 132.1 191 35.1
QL06p028120 Quercus lobata HOM05D006066 ORTHO05D007720 6.4e-29 132.1 130 50.8
Lalb_Chr07g0194051 Lupinus albus HOM05D006066 ORTHO05D007720 1.9e-28 130.6 277 32.9
Phvul.010G014500 Phaseolus vulgaris HOM05D006066 ORTHO05D007720 1.9e-28 130.6 226 33.2
Sp3g06000 Schrenkiella parvula HOM05D006066 ORTHO05D007720 2.4e-28 130.2 192 34.9
Medtr7g026915 Medicago truncatula HOM05D006066 ORTHO05D007720 4.2e-28 129.4 231 32.0
MD05G1177000 Malus domestica HOM05D006066 ORTHO05D007720 2.1e-27 127.1 135 48.9
Cpa.g.sc8.165 Carica papaya HOM05D006066 ORTHO05D007720 3.5e-27 126.3 158 43.7
Zm00001eb173150 Zea mays HOM05D006066 ORTHO05D007720 4.6e-27 125.9 268 32.8
TPR.G5589 Trifolium pratense HOM05D006066 ORTHO05D007720 6.6e-26 122.1 200 34.5
arahy.Tifrunner.gnm1.ann1.50JBL9 Arachis hypogaea HOM05D006066 ORTHO05D007720 1.1e-23 114.8 275 30.5
arahy.Tifrunner.gnm1.ann1.9R7KTD Arachis hypogaea HOM05D006066 ORTHO05D007720 5.3e-23 112.5 275 30.5
CARHR081640 Cardamine hirsuta HOM05D006066 ORTHO05D007720 6.9e-23 112.1 150 35.3
Cc01_g17160 Coffea canephora HOM05D006066 ORTHO05D007720 2.0e-22 110.5 96 47.9
SEGI_19430 Sequoiadendron giganteum HOM05D006066 ORTHO05D007720 5.8e-22 109.0 214 30.4
unitig_22.g5305 Utricularia gibba HOM05D006066 ORTHO05D007720 3.8e-21 106.3 217 30.0
Ciclev10024634m.g Citrus clementina HOM05D006066 ORTHO05D007720 7.9e-19 98.6 144 41.7
Nitab4.5_0001872g0040 Nicotiana tabacum HOM05D006066 ORTHO05D007720 1.0e-18 98.2 161 40.4
Glyma.16G068300 Glycine max HOM05D006066 ORTHO05D007720 1.3e-16 91.3 135 34.8
BcaB05g23643 Brassica carinata HOM05D006066 ORTHO05D007720 2.8e-16 90.1 172 30.2
BcaC03g16146 Brassica carinata HOM05D006066 ORTHO05D007720 2.8e-16 90.1 172 30.2
VMungo0331G1566 Vigna mungo HOM05D006066 ORTHO05D007720 2.6e-14 83.6 189 28.6
QL06p028105 Quercus lobata HOM05D006066 ORTHO05D007720 6.7e-10 68.9 84 34.5
SHI34885 Sapria himalayana HOM05D006066 ORTHO05D007720 5.6e-09 65.9 91 35.2
Ah.08g213920 Amaranthus hybridus HOM05D006066 ORTHO05D007720 1.0e-05 55.1 77 36.4


User provided reference genes

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