Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia09246 Actinidia chinensis HOM05D011850 ORTHO05D011180 4.8e-185 651.0 321 100.0
Actinidia04846 Actinidia chinensis HOM05D011850 ORTHO05D011180 3.8e-97 359.0 214 85.0
Rhsim08G0149300 Rhododendron simsii HOM05D011850 ORTHO05D011180 1.8e-83 313.5 318 54.4
vmacro17588 Vaccinium macrocarpon HOM05D011850 ORTHO05D011180 1.2e-74 284.3 318 51.9
Dinv10687 Davidia involucrata HOM05D011850 ORTHO05D011180 9.8e-45 184.9 326 37.4
Actinidia28651 Actinidia chinensis HOM05D011850 ORTHO05D011180 3.7e-44 183.0 206 52.9
Dinv38781 Davidia involucrata HOM05D011850 ORTHO05D011180 7.6e-37 158.7 293 35.5
Lj9A469T61 Lonicera japonica HOM05D011850 ORTHO05D011180 9.2e-35 151.8 256 38.7
Hund02609 Selenicereus undatus HOM05D011850 ORTHO05D011180 9.9e-29 131.7 222 36.9
CSS0006694 Camellia sinensis var. sinensis HOM05D011850 ORTHO05D011180 1.2e-18 98.2 198 34.8
Hund02610 Selenicereus undatus HOM05D011850 ORTHO05D011180 6.0e-18 95.9 187 31.0
vmacro17589 Vaccinium macrocarpon HOM05D011850 ORTHO05D011180 2.5e-16 90.5 99 52.5
CSS0044149 Camellia sinensis var. sinensis HOM05D012515 ORTHO05D011180 1.4e-14 84.7 85 52.9
Nitab4.5_0001591g0150 Nicotiana tabacum HOM05D012515 ORTHO05D011180 5.3e-14 82.8 135 41.5
Nitab4.5_0000568g0180 Nicotiana tabacum HOM05D012515 ORTHO05D011180 9.0e-14 82.0 103 46.6
Hund02612 Selenicereus undatus HOM05D011850 ORTHO05D011180 2.0e-13 80.9 90 44.4
Actinidia26233 Actinidia chinensis HOM05D012515 ORTHO05D011180 7.6e-13 79.0 111 46.8
Hund02611 Selenicereus undatus HOM05D011850 ORTHO05D011180 2.9e-12 77.0 139 33.8
Rhsim08G0071600 Rhododendron simsii HOM05D012515 ORTHO05D011180 3.8e-12 76.6 85 49.4
CAN.G206.177 Capsicum annuum HOM05D012515 ORTHO05D011180 6.4e-12 75.9 98 42.9
Solyc02g088280.3 Solanum lycopersicum HOM05D012515 ORTHO05D011180 1.1e-11 75.1 136 36.0
Sopen02g032970 Solanum pennellii HOM05D012515 ORTHO05D011180 1.1e-11 75.1 136 36.0
PGSC0003DMG403001341 Solanum tuberosum HOM05D012515 ORTHO05D011180 1.4e-11 74.7 81 45.7
Peaxi162Scf00166g01037 Petunia axillaris HOM05D012515 ORTHO05D011180 4.2e-11 73.2 103 42.7
Lsat_1_v5_gn_9_33841 Lactuca sativa HOM05D017474 ORTHO05D011180 1.1e-08 65.1 93 39.8
Lj1A1233G67 Lonicera japonica HOM05D012515 ORTHO05D011180 3.7e-07 60.1 78 41.0
GSVIVG01011462001 Vitis vinifera HOM05D012515 ORTHO05D011180 3.7e-07 60.1 89 38.2
Lsat_1_v5_gn_9_33941 Lactuca sativa HOM05D017474 ORTHO05D011180 8.1e-07 58.9 92 38.0
HanXRQChr10g0293781 Helianthus annuus HOM05D017474 ORTHO05D011180 2.4e-06 57.4 88 38.6
ECA234G4364 Erigeron canadensis HOM05D017474 ORTHO05D011180 5.3e-06 56.2 90 38.9
HanXRQChr10g0293751 Helianthus annuus HOM05D006218 ORTHO05D007338 9.0e-06 55.5 89 31.5


User provided reference genes

Program Settings