Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia09092 Actinidia chinensis HOM05D026250 ORTHO05D026319 2.3e-122 442.6 280 100.0
Actinidia09825 Actinidia chinensis HOM05D026250 ORTHO05D026319 1.3e-64 250.8 185 83.8
Actinidia16393 Actinidia chinensis HOM05D026250 ORTHO05D026319 8.3e-48 194.9 174 74.1
Actinidia38111 Actinidia chinensis HOM05D026250 ORTHO05D026319 3.5e-30 136.3 106 83.0
Rhsim05G0207800 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.8e-11 72.8 90 38.9
TWI77G0254 Tripterygium wilfordii HOM05D007376 ORTHO05D001590 2.0e-09 67.4 90 38.9
CSS0003731 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0006787 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0007760 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0012255 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0013786 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0029408 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
CSS0037609 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 3.4e-09 66.6 119 31.1
Rhsim04G0195400 Rhododendron simsii HOM05D007376 ORTHO05D007523 3.4e-09 66.6 89 36.0
Dinv02278 Davidia involucrata HOM05D007376 ORTHO05D006265 9.9e-09 65.1 90 35.6
Rhsim03G0108100 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.7e-08 64.3 89 34.8
CSS0035720 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.9e-08 63.5 119 30.3
CSS0037922 Camellia sinensis var. sinensis HOM05D001536 ORTHO05D001442 6.4e-08 62.4 90 34.4
CSS0005751 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D001590 8.4e-08 62.0 90 32.2
CSS0026649 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 8.4e-08 62.0 90 32.2
Rhsim05G0207500 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.1e-07 61.6 117 33.3
vmacro00448 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 1.1e-07 61.6 90 38.9
CSS0008720 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-07 61.2 90 32.2
CSS0013773 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-07 61.2 90 32.2
CSS0015660 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 1.4e-07 61.2 90 32.2
vmacro01212 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 1.4e-07 61.2 94 36.2
CSS0003651 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 1.9e-07 60.8 81 38.3
RhsimUnG0093700 Rhododendron simsii HOM05D007376 ORTHO05D001590 2.4e-07 60.5 101 29.7
vmacro15448 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 2.4e-07 60.5 90 34.4
CSS0020562 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 3.2e-07 60.1 85 32.9
CSS0047144 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 3.2e-07 60.1 90 32.2
vmacro00568 Vaccinium macrocarpon HOM05D013156 ORTHO05D013099 3.2e-07 60.1 80 41.2
Rhsim06G0146100 Rhododendron simsii HOM05D007376 ORTHO05D001590 5.4e-07 59.3 89 32.6
CSS0018623 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 7.1e-07 58.9 85 32.9
CSS0022404 Camellia sinensis var. sinensis HOM05D007376 ORTHO05D001590 1.6e-06 57.8 85 29.4
Rhsim12G0049900 Rhododendron simsii HOM05D007376 ORTHO05D001590 1.6e-06 57.8 73 35.6
RhsimUnG0042500 Rhododendron simsii HOM05D007376 ORTHO05D010137 1.6e-06 57.8 73 35.6
CSS0022638 Camellia sinensis var. sinensis HOM05D008484 ORTHO05D007523 2.1e-06 57.4 84 35.7
CSS0047960 Camellia sinensis var. sinensis HOM05D008809 ORTHO05D007523 2.7e-06 57.0 90 31.1
Rhsim04G0163600 Rhododendron simsii HOM05D007376 ORTHO05D001590 4.6e-06 56.2 103 32.0
vmacro09226 Vaccinium macrocarpon HOM05D007376 ORTHO05D001590 4.6e-06 56.2 91 33.0
Rhsim03G0047500 Rhododendron simsii HOM05D007376 ORTHO05D001590 6.0e-06 55.8 70 34.3
Rhsim12G0081900 Rhododendron simsii HOM05D007376 ORTHO05D001590 7.9e-06 55.5 70 35.7
vmacro00666 Vaccinium macrocarpon HOM05D007376 ORTHO05D026098 7.9e-06 55.5 75 33.3


User provided reference genes

Program Settings