Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Actinidia08907 Actinidia chinensis HOM05D001198 ORTHO05D057580 3.4e-55 218.0 105 100.0
GSVIVG01007874001 Vitis vinifera HOM05D001198 ORTHO05D001599 3.5e-07 58.5 32 75.0
CSS0007414 Camellia sinensis var. sinensis HOM05D001198 ORTHO05D001599 4.5e-07 58.2 32 75.0
CSS0036633 Camellia sinensis var. sinensis HOM05D001198 ORTHO05D001599 4.5e-07 58.2 32 75.0
AUR62009536 Chenopodium quinoa HOM05D001198 ORTHO05D001599 5.9e-07 57.8 32 75.0
Cfa018708 Carpinus fangiana HOM05D001198 ORTHO05D001599 7.7e-07 57.4 86 45.3
arahy.Tifrunner.gnm1.ann1.45ZRCR Arachis hypogaea HOM05D001198 ORTHO05D001599 1.0e-06 57.0 32 71.9
arahy.Tifrunner.gnm1.ann1.X3UY05 Arachis hypogaea HOM05D001198 ORTHO05D001599 1.0e-06 57.0 32 71.9
AUR62041700 Chenopodium quinoa HOM05D001198 ORTHO05D001599 1.0e-06 57.0 32 75.0
Glyma.02G230300 Glycine max HOM05D001198 ORTHO05D001599 1.0e-06 57.0 32 71.9
Atru.chr6.1914 Acer truncatum HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 75.0
Dinv07278 Davidia involucrata HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 71.9
Duzib205G0997 Durio zibethinus HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 75.0
Phvul.001G015500 Phaseolus vulgaris HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 68.8
Rhsim12G0180800 Rhododendron simsii HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 71.9
Thecc.03G140200 Theobroma cacao HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 75.0
vmacro16754 Vaccinium macrocarpon HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 71.9
VMungo0647G2236 Vigna mungo HOM05D001198 ORTHO05D001599 1.3e-06 56.6 32 68.8
Ca_05638_v3 Cicer arietinum L. HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
MELO3C015000.2 Cucumis melo HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
CsaV3_5G015000 Cucumis sativus L. HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
Lalb_Chr04g0252071 Lupinus albus HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
Medtr5g072520 Medicago truncatula HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
TPR.G34742 Trifolium pratense HOM05D001198 ORTHO05D001599 2.3e-06 55.8 32 71.9
TAR622G1420 Trochodendron aralioides HOM05D001198 ORTHO05D001599 2.3e-06 55.8 28 78.6
ClCG06G018360 Citrullus lanatus HOM05D001198 ORTHO05D001599 2.9e-06 55.5 47 51.1
Hund10041 Selenicereus undatus HOM05D001198 ORTHO05D001599 2.9e-06 55.5 32 71.9
Cpa.g.sc136.69 Carica papaya HOM05D001198 ORTHO05D001599 3.8e-06 55.1 32 71.9
Haze_07099 Corylus avellana HOM05D001198 ORTHO05D001599 3.8e-06 55.1 85 41.2
Gohir.A12G193500 Gossypium hirsutum HOM05D001198 ORTHO05D001599 3.8e-06 55.1 32 71.9
Gohir.D12G196000 Gossypium hirsutum HOM05D001198 ORTHO05D001599 3.8e-06 55.1 32 71.9
Gorai.008G210500 Gossypium raimondii HOM05D001198 ORTHO05D001599 3.8e-06 55.1 32 71.9
Hma1.2p1_0452F.1_g156000 Hydrangea macrophylla HOM05D001198 ORTHO05D001599 3.8e-06 55.1 28 78.6
Ah.11g046880 Amaranthus hybridus HOM05D001198 ORTHO05D001599 5.0e-06 54.7 32 71.9
MD07G1081600 Malus domestica HOM05D001198 ORTHO05D001599 5.0e-06 54.7 32 71.9
MD07G1081900 Malus domestica HOM05D001198 ORTHO05D001599 5.0e-06 54.7 32 71.9
EL10Ac5g11290 Beta vulgaris HOM05D001198 ORTHO05D001599 6.6e-06 54.3 32 71.9
Manes.14G171700 Manihot esculenta HOM05D001198 ORTHO05D001599 6.6e-06 54.3 32 65.6
Nn3g16277 Nelumbo nucifera HOM05D001198 ORTHO05D001599 6.6e-06 54.3 32 68.8
Sed0023532 Sechium edule HOM05D001198 ORTHO05D001599 6.6e-06 54.3 66 45.5
CiPaw.12G027900 Carya illinoinensis HOM05D001198 ORTHO05D001599 8.6e-06 53.9 32 65.6
CDE01G0379 Ceratophyllum demersum HOM05D001198 ORTHO05D001599 8.6e-06 53.9 28 71.4
DCAR_025648 Daucus carota HOM05D001198 ORTHO05D001599 8.6e-06 53.9 27 81.5
Lsat_1_v5_gn_2_115520 Lactuca sativa HOM05D001198 ORTHO05D001599 8.6e-06 53.9 32 65.6
Psat2g055080 Pisum sativum HOM05D001198 ORTHO05D001599 8.6e-06 53.9 32 68.8
Potri.015G106200 Populus trichocarpa HOM05D001198 ORTHO05D001599 8.6e-06 53.9 28 78.6
Sabra15G0126300 Salix brachista HOM05D001198 ORTHO05D001599 8.6e-06 53.9 28 78.6
Zm00001eb244100 Zea mays HOM05D001198 ORTHO05D001599 8.6e-06 53.9 28 75.0


User provided reference genes

Program Settings